Integrative Orthology Viewer: AT1G04570 (Arabidopsis thaliana)
Inparalogs
Organism | Source | Genes | #genes | Details |
---|---|---|---|---|
Arabidopsis thaliana | Orthologous gene family | AT1G04570 AT2G33280 | 2 | |
Tree-based ortholog | AT1G04570 | 1 | ||
Anchor point | AT2G33280 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | AT1G04570 | 1 |
Orthologs
Organism | Source | Type | Genes | #genes | Details |
---|---|---|---|---|---|
Amborella trichopoda | Orthologous gene family | many-to-many | ATR_00039G01160 ATR_00071G01040 | 2 | |
Tree-based ortholog | 1-to-1 | ATR_00039G01160 | 1 | ||
Anchor point | 1-to-1 | ATR_00039G01160 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ATR_00011G02310 | 1 | ||
Arabidopsis lyrata | Orthologous gene family | many-to-1 | AL4G18500 | 1 | |
Tree-based ortholog | 1-to-1 | AL4G18500 | 1 | ||
Anchor point | 1-to-1 | AL4G18500 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AL4G18500 | 1 | ||
Beta vulgaris | Orthologous gene family | many-to-1 | BV0G17980 | 1 | |
Tree-based ortholog | 1-to-1 | BV0G17980 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BV0G17980 | 1 | ||
Brassica rapa | Orthologous gene family | many-to-many | BR04G19770 BR10G03210 | 2 | |
Tree-based ortholog | 1-to-many | BR10G04910 BR10G03210 | 2 | ||
Anchor point | 1-to-many | BR10G03210 BR04G19770 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BR10G03210 | 1 | ||
Capsella rubella | Orthologous gene family | many-to-1 | CRU_001G03480 | 1 | |
Tree-based ortholog | 1-to-1 | CRU_001G03480 | 1 | ||
Anchor point | 1-to-1 | CRU_001G03480 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CRU_001G03480 | 1 | ||
Carica papaya | Orthologous gene family | many-to-1 | CP00059G00260 | 1 | |
Tree-based ortholog | 1-to-1 | CP00059G00260 | 1 | ||
Anchor point | 1-to-1 | CP00059G00260 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CP00059G00260 | 1 | ||
Chlamydomonas reinhardtii | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CR01G01830 | 1 | |
Citrullus lanatus | Orthologous gene family | many-to-1 | CL05G04170 | 1 | |
Tree-based ortholog | 1-to-1 | CL05G04170 | 1 | ||
Anchor point | 1-to-1 | CL05G04170 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CL05G04170 | 1 | ||
Citrus sinensis | Orthologous gene family | many-to-1 | CS01127G00010 | 1 | |
Tree-based ortholog | 1-to-1 | CS01127G00010 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CS01127G00010 | 1 | ||
Cucumis melo | Orthologous gene family | many-to-1 | CM00006G04640 | 1 | |
Tree-based ortholog | 1-to-1 | CM00006G04640 | 1 | ||
Anchor point | 1-to-1 | CM00006G04640 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CM00006G04640 | 1 | ||
Eucalyptus grandis | Orthologous gene family | many-to-1 | EG0008G23440 | 1 | |
Tree-based ortholog | 1-to-1 | EG0008G23440 | 1 | ||
Anchor point | 1-to-1 | EG0008G23440 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | EG0008G23440 | 1 | ||
Fragaria vesca | Orthologous gene family | many-to-1 | FV0G37670 | 1 | |
Tree-based ortholog | 1-to-1 | FV0G37670 | 1 | ||
Anchor point | 1-to-1 | FV0G37670 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | FV0G37670 | 1 | ||
Glycine max | Orthologous gene family | many-to-many | GM04G13920 GM06G47610 | 2 | |
Tree-based ortholog | 1-to-many | GM04G13920 GM06G47610 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | GM06G47610 GM04G13920 | 2 | ||
Gossypium raimondii | Orthologous gene family | many-to-many | GR05G05510 GR06G25410 | 2 | |
Tree-based ortholog | 1-to-many | GR05G05510 GR06G25410 | 2 | ||
Anchor point | 1-to-1 | GR05G05510 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | GR05G05510 | 1 | ||
Lotus japonicus | Tree-based ortholog | 1-to-1 | LJ3G004300 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | LJ5G006900 | 1 | ||
Malus domestica | Orthologous gene family | many-to-1 | MD00G443970 | 1 | |
Tree-based ortholog | 1-to-1 | MD00G443970 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | MD00G443970 | 1 | ||
Manihot esculenta | Orthologous gene family | many-to-many | ME01551G00330 ME10563G01970 | 2 | |
Tree-based ortholog | 1-to-many | ME01551G00330 ME10563G01970 | 2 | ||
Anchor point | 1-to-many | ME10563G01970 ME01551G00330 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | ME10563G01970 ME01551G00330 | 2 | ||
Medicago truncatula | Orthologous gene family | many-to-1 | MT3G008470 | 1 | |
Tree-based ortholog | 1-to-1 | MT3G008470 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | MT3G008470 | 1 | ||
Oryza sativa ssp. japonica | Orthologous gene family | many-to-1 | OS07G24230 | 1 | |
Tree-based ortholog | 1-to-1 | OS07G24230 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OS07G24230 | 1 | ||
Ostreococcus lucimarinus | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OL07G00440 | 1 | |
Physcomitrella patens | Tree-based ortholog | 1-to-many | PP00019G01360 PP00465G00010 PP00230G00160 ... | 4 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PP00230G00160 PP00465G00010 PP00019G01360 ... | 4 | ||
Populus trichocarpa | Orthologous gene family | many-to-many | PT08G17360 PT10G06380 | 2 | |
Tree-based ortholog | 1-to-many | PT08G17360 PT10G06380 | 2 | ||
Anchor point | 1-to-many | PT10G06380 PT08G17360 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PT10G06380 PT08G17360 | 2 | ||
Prunus persica | Orthologous gene family | many-to-1 | PPE_001G05040 | 1 | |
Tree-based ortholog | 1-to-1 | PPE_001G05040 | 1 | ||
Anchor point | 1-to-1 | PPE_001G05040 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PPE_001G05040 | 1 | ||
Ricinus communis | Orthologous gene family | many-to-1 | RC29904G01690 | 1 | |
Tree-based ortholog | 1-to-1 | RC29904G01690 | 1 | ||
Anchor point | 1-to-1 | RC29904G01690 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | RC29904G01690 | 1 | ||
Solanum lycopersicum | Orthologous gene family | many-to-1 | SL09G090760 | 1 | |
Tree-based ortholog | 1-to-1 | SL09G090760 | 1 | ||
Anchor point | 1-to-1 | SL09G090760 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | SL09G090760 | 1 | ||
Solanum tuberosum | Orthologous gene family | many-to-1 | ST09G026710 | 1 | |
Tree-based ortholog | 1-to-1 | ST09G026710 | 1 | ||
Anchor point | 1-to-1 | ST09G026710 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ST09G026710 | 1 | ||
Thellungiella parvula | Orthologous gene family | many-to-many | TP1G03410 TP4G15590 | 2 | |
Tree-based ortholog | 1-to-1 | TP1G03410 | 1 | ||
Anchor point | 1-to-many | TP1G03410 TP4G15590 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TP4G15590 | 1 | ||
Theobroma cacao | Orthologous gene family | many-to-1 | TC0004G27030 | 1 | |
Tree-based ortholog | 1-to-1 | TC0004G27030 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TC0004G27030 | 1 | ||
Vitis vinifera | Orthologous gene family | many-to-1 | VV05G09220 | 1 | |
Tree-based ortholog | 1-to-1 | VV05G09220 | 1 | ||
Anchor point | 1-to-1 | VV05G09220 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | VV05G09220 | 1 | ||
Zea mays | Orthologous gene family | many-to-1 | ZM07G07240 | 1 | |
Tree-based ortholog | 1-to-1 | ZM07G07240 | 1 | ||
Anchor point | 1-to-1 | ZM07G07240 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ZM07G07240 | 1 |