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Integrative Orthology Viewer:
AT1G04400
(Arabidopsis thaliana)
Inparalogs
| Organism | Source | Genes | #genes | Details |
|---|---|---|---|---|
| Arabidopsis thaliana | Orthologous gene family | AT1G04400 AT4G08920 | 2 |  |
| Tree-based ortholog | AT1G04400 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | AT1G04400 | 1 |
Orthologs
| Organism | Source | Type | Genes | #genes | Details |
|---|---|---|---|---|---|
| Amborella trichopoda | Orthologous gene family | many-to-many | ATR_00038G01230 ATR_00148G00690 | 2 | |
| Tree-based ortholog | 1-to-1 | ATR_00148G00690 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ATR_00148G00690 | 1 | ||
| Arabidopsis lyrata | Orthologous gene family | many-to-many | AL1G03730 AL6G30110 | 2 | |
| Tree-based ortholog | 1-to-1 | AL1G03730 | 1 | ||
| Anchor point | N/A | AL1G03730 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AL1G03730 | 1 | ||
| Beta vulgaris | Orthologous gene family | many-to-many | BV1G10850 BV3G09490 | 2 | |
| Tree-based ortholog | 1-to-1 | BV3G09490 | 1 | ||
| Anchor point | N/A | BV3G09490 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BV3G09490 | 1 | ||
| Brassica rapa | Orthologous gene family | many-to-many | BR08G31370 BR09G16820 BR10G03370 | 3 | |
| Tree-based ortholog | 1-to-1 | BR08G31370 | 1 | ||
| Anchor point | N/A | BR10G03370 BR08G31370 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BR08G31370 | 1 | ||
| Capsella rubella | Orthologous gene family | many-to-many | CRU_001G03290 CRU_006G26580 | 2 | |
| Tree-based ortholog | 1-to-1 | CRU_001G03290 | 1 | ||
| Anchor point | N/A | CRU_001G03290 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CRU_001G03290 | 1 | ||
| Carica papaya | Orthologous gene family | many-to-many | CP00036G01340 CP00044G00590 | 2 | |
| Tree-based ortholog | 1-to-1 | CP00044G00590 | 1 | ||
| Anchor point | N/A | CP00044G00590 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CP00044G00590 | 1 | ||
| Chlamydomonas reinhardtii | Orthologous gene family | many-to-1 | CR06G12190 | 1 | |
| Tree-based ortholog | 1-to-1 | CR06G12190 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CR06G12190 | 1 | ||
| Citrullus lanatus | Orthologous gene family | many-to-many | CL06G06780 CL11G08270 | 2 | |
| Tree-based ortholog | 1-to-1 | CL06G06780 | 1 | ||
| Anchor point | N/A | CL06G06780 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CL06G06780 | 1 | ||
| Citrus sinensis | Orthologous gene family | many-to-many | CS00004G02110 CS00088G00350 | 2 | |
| Tree-based ortholog | 1-to-1 | CS00088G00350 | 1 | ||
| Anchor point | N/A | CS00088G00350 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CS00088G00350 | 1 | ||
| Cucumis melo | Orthologous gene family | many-to-many | CM00057G00270 CM01596G02900 | 2 | |
| Tree-based ortholog | 1-to-1 | CM00057G00270 | 1 | ||
| Anchor point | N/A | CM00057G00270 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CM01596G02900 | 1 | ||
| Eucalyptus grandis | Orthologous gene family | many-to-many | EG0006G02800 EG0008G01480 | 2 | |
| Tree-based ortholog | 1-to-1 | EG0008G01480 | 1 | ||
| Anchor point | N/A | EG0008G01480 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | EG0008G01480 | 1 | ||
| Fragaria vesca | Orthologous gene family | many-to-many | FV4G00330 FV5G39290 | 2 | |
| Tree-based ortholog | 1-to-1 | FV4G00330 | 1 | ||
| Anchor point | N/A | FV4G00330 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | FV4G00330 | 1 | ||
| Glycine max | Orthologous gene family | many-to-many | GM02G00830 GM04G11010 GM06G10830 ... | 7 | |
| Tree-based ortholog | 1-to-many | GM02G00830 GM20G35220 GM10G32390 | 3 | ||
| Anchor point | N/A | GM02G00830 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | GM20G35220 GM10G32390 | 2 | ||
| Gossypium raimondii | Orthologous gene family | many-to-many | GR05G05000 GR06G25370 GR09G23670 ... | 4 | |
| Tree-based ortholog | 1-to-many | GR06G25370 GR05G05000 | 2 | ||
| Anchor point | N/A | GR06G25370 GR05G05000 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | GR06G25370 | 1 | ||
| Lotus japonicus | Orthologous gene family | many-to-1 | LJ6G000330 | 1 | |
| Tree-based ortholog | 1-to-1 | LJ6G000330 | 1 | ||
| Anchor point | N/A | LJ6G000330 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | LJ6G000330 | 1 | ||
| Malus domestica | Orthologous gene family | many-to-many | MD00G081150 MD01G001980 MD01G001990 ... | 7 | |
| Tree-based ortholog | 1-to-many | MD00G081150 MD16G016460 MD13G023280 ... | 4 | ||
| Anchor point | N/A | MD13G023110 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | MD13G023110 MD13G023280 | 2 | ||
| Manihot esculenta | Orthologous gene family | many-to-many | ME01551G00990 ME07027G00300 ME12455G00280 | 3 | |
| Tree-based ortholog | 1-to-1 | ME01551G00990 | 1 | ||
| Anchor point | N/A | ME01551G00990 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ME01551G00990 | 1 | ||
| Medicago truncatula | Orthologous gene family | many-to-many | MT1G043190 MT1G076190 MT5G063920 | 3 | |
| Tree-based ortholog | 1-to-many | MT1G043190 MT1G076190 | 2 | ||
| Anchor point | N/A | MT1G043190 MT1G076190 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | MT1G076190 | 1 | ||
| Oryza sativa ssp. japonica | Orthologous gene family | many-to-many | OS02G36380 OS02G41550 OS04G37920 | 3 | |
| Tree-based ortholog | 1-to-1 | OS02G41550 | 1 | ||
| Anchor point | N/A | OS02G41550 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OS02G41550 | 1 | ||
| Ostreococcus lucimarinus | Orthologous gene family | many-to-many | OL14G00970 OL14G01630 | 2 | |
| Tree-based ortholog | 1-to-many | OL14G00970 OL14G01630 OL05G00260 | 3 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OL05G00260 | 1 | ||
| Physcomitrella patens | Orthologous gene family | many-to-many | PP00002G01920 PP00002G01950 | 2 | |
| Tree-based ortholog | 1-to-many | PP00002G01950 PP00002G01920 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PP00002G01920 | 1 | ||
| Populus trichocarpa | Orthologous gene family | many-to-many | PT02G09690 PT05G16470 PT08G16660 ... | 4 | |
| Tree-based ortholog | 1-to-many | PT10G07120 PT08G16660 | 2 | ||
| Anchor point | N/A | PT10G07120 PT08G16660 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PT10G07120 | 1 | ||
| Prunus persica | Orthologous gene family | many-to-many | PPE_001G03820 PPE_001G52160 | 2 | |
| Tree-based ortholog | 1-to-1 | PPE_001G03820 | 1 | ||
| Anchor point | N/A | PPE_001G03820 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PPE_001G03820 | 1 | ||
| Ricinus communis | Orthologous gene family | many-to-many | RC29895G00050 RC29908G01820 | 2 | |
| Tree-based ortholog | 1-to-1 | RC29895G00050 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | RC29895G00050 | 1 | ||
| Solanum lycopersicum | Orthologous gene family | many-to-many | SL04G074180 SL09G090100 SL12G057040 | 3 | |
| Tree-based ortholog | 1-to-1 | SL09G090100 | 1 | ||
| Anchor point | N/A | SL09G090100 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | SL09G090100 | 1 | ||
| Solanum tuberosum | Orthologous gene family | many-to-many | ST04G027940 ST09G025850 ST12G025590 | 3 | |
| Tree-based ortholog | 1-to-1 | ST09G025850 | 1 | ||
| Anchor point | N/A | ST09G025850 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ST09G025850 | 1 | ||
| Thellungiella parvula | Orthologous gene family | many-to-many | TP1G03220 TP6G08810 | 2 | |
| Tree-based ortholog | 1-to-1 | TP1G03220 | 1 | ||
| Anchor point | N/A | TP2G08150 TP1G03220 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TP1G03220 | 1 | ||
| Theobroma cacao | Orthologous gene family | many-to-many | TC0004G25720 TC0008G10280 | 2 | |
| Tree-based ortholog | 1-to-1 | TC0004G25720 | 1 | ||
| Anchor point | N/A | TC0004G25720 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TC0004G25720 | 1 | ||
| Vitis vinifera | Orthologous gene family | many-to-many | VV05G08200 VV18G03560 | 2 | |
| Tree-based ortholog | 1-to-1 | VV05G08200 | 1 | ||
| Anchor point | N/A | VV05G08200 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | VV05G08200 | 1 | ||
| Zea mays | Orthologous gene family | many-to-many | ZM02G13620 ZM04G17060 ZM05G31560 ... | 4 | |
| Tree-based ortholog | 1-to-1 | ZM09G09240 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ZM09G09240 | 1 |