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Integrative Orthology Viewer:
AT1G04220
(Arabidopsis thaliana)
Inparalogs
| Organism | Source | Genes | #genes | Details |
|---|---|---|---|---|
| Arabidopsis thaliana | Orthologous gene family | AT1G04220 | 1 |  |
| Tree-based ortholog | AT1G04220 | 1 | ||
| Anchor point | AT5G43760 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | AT1G04220 | 1 |
Orthologs
| Organism | Source | Type | Genes | #genes | Details |
|---|---|---|---|---|---|
| Amborella trichopoda | Tree-based ortholog | 1-to-1 | ATR_00002G05340 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ATR_00052G00410 | 1 | ||
| Arabidopsis lyrata | Orthologous gene family | 1-to-1 | AL0G06090 | 1 | |
| Tree-based ortholog | 1-to-1 | AL1G03550 | 1 | ||
| Anchor point | 1-to-1 | AL1G03550 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AL1G03550 | 1 | ||
| Beta vulgaris | Tree-based ortholog | 1-to-many | BV0G27020 BV6G02450 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BV7G10460 | 1 | ||
| Brassica rapa | Tree-based ortholog | 1-to-many | BR06G38540 BR00G06970 BR10G03540 | 3 | |
| Anchor point | 1-to-many | BR00G06970 BR06G38540 BR10G03540 ... | 4 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BR10G03540 | 1 | ||
| Capsella rubella | Tree-based ortholog | 1-to-1 | CRU_001G03130 | 1 | |
| Anchor point | 1-to-1 | CRU_001G03130 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CRU_001G03130 | 1 | ||
| Carica papaya | Tree-based ortholog | 1-to-many | CP00058G00050 CP00058G00040 CP00058G00060 | 3 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CP01103G00010 | 1 | ||
| Chlamydomonas reinhardtii | Tree-based ortholog | 1-to-many | CR17G05760 CR07G01700 CR07G01410 ... | 5 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CR17G05760 | 1 | ||
| Citrullus lanatus | Tree-based ortholog | 1-to-1 | CL05G05210 | 1 | |
| Anchor point | 1-to-1 | CL05G05210 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CL05G05210 | 1 | ||
| Citrus sinensis | Tree-based ortholog | 1-to-many | CS00132G00280 CS00132G00310 CS00132G00260 ... | 6 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CS00132G00250 | 1 | ||
| Cucumis melo | Tree-based ortholog | 1-to-1 | CM00006G05870 | 1 | |
| Anchor point | 1-to-1 | CM00006G05870 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CM00006G05870 | 1 | ||
| Eucalyptus grandis | Tree-based ortholog | 1-to-many | EG0008G02100 EG0008G02120 EG0008G02110 ... | 10 | |
| Anchor point | 1-to-1 | EG0008G25830 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | EG0008G25830 | 1 | ||
| Fragaria vesca | Tree-based ortholog | 1-to-1 | FV4G06760 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | FV4G06760 | 1 | ||
| Glycine max | Tree-based ortholog | 1-to-many | GM17G23590 GM05G17390 | 2 | |
| Anchor point | 1-to-many | GM10G00440 GM10G32260 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | GM20G35340 GM10G32260 | 2 | ||
| Gossypium raimondii | Tree-based ortholog | 1-to-1 | GR06G06980 | 1 | |
| Anchor point | 1-to-1 | GR06G06980 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | GR11G16520 | 1 | ||
| Lotus japonicus | Tree-based ortholog | 1-to-1 | LJ5G022830 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | LJ5G022830 | 1 | ||
| Malus domestica | Tree-based ortholog | 1-to-many | MD00G028140 MD00G406950 MD13G020060 ... | 4 | |
| Anchor point | 1-to-1 | MD13G020060 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | MD00G406950 MD13G020060 | 2 | ||
| Manihot esculenta | Tree-based ortholog | 1-to-many | ME05993G00010 ME10583G00020 ME10547G00020 ... | 8 | |
| Anchor point | 1-to-many | ME01551G01520 ME10563G00570 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | ME01551G01520 ME10563G00570 | 2 | ||
| Medicago truncatula | Tree-based ortholog | 1-to-many | MT4G053905 MT4G054630 MT4G054415 ... | 6 | |
| Anchor point | 1-to-1 | MT1G076430 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | MT1G076430 | 1 | ||
| Oryza sativa ssp. japonica | Tree-based ortholog | 1-to-1 | OS11G37900 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OS05G49900 | 1 | ||
| Physcomitrella patens | Tree-based ortholog | 1-to-many | PP00030G01670 PP00021G00410 PP00245G00090 | 3 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PP00030G01670 PP00021G00410 PP00245G00090 | 3 | ||
| Populus trichocarpa | Tree-based ortholog | 1-to-many | PT10G08040 PT10G07990 PT10G07970 ... | 6 | |
| Anchor point | 1-to-many | PT10G07930 PT08G16000 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PT10G07930 PT08G16000 PT10G07940 | 3 | ||
| Prunus persica | Tree-based ortholog | 1-to-1 | PPE_001G02520 | 1 | |
| Anchor point | 1-to-1 | PPE_001G02520 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PPE_001G02520 | 1 | ||
| Ricinus communis | Tree-based ortholog | 1-to-many | RC33107G00010 RC29844G00330 RC29844G00340 | 3 | |
| Anchor point | 1-to-1 | RC29844G00320 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | RC29844G00320 | 1 | ||
| Solanum lycopersicum | Tree-based ortholog | 1-to-many | SL06G053900 SL05G013220 SL06G053870 ... | 4 | |
| Anchor point | 1-to-many | SL06G053870 SL03G005320 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | SL09G083050 | 1 | ||
| Solanum tuberosum | Tree-based ortholog | 1-to-many | ST06G016900 ST06G016920 ST05G005000 ... | 5 | |
| Anchor point | 1-to-many | ST06G016900 ST03G005540 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ST09G024950 | 1 | ||
| Thellungiella parvula | Tree-based ortholog | 1-to-many | TP2G08570 TP1G03040 | 2 | |
| Anchor point | 1-to-many | TP2G08570 TP1G03040 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TP1G03040 | 1 | ||
| Theobroma cacao | Tree-based ortholog | 1-to-many | TC0004G24560 TC0004G24570 TC0004G24580 ... | 6 | |
| Anchor point | 1-to-1 | TC0004G24520 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TC0004G24590 | 1 | ||
| Vitis vinifera | Tree-based ortholog | 1-to-1 | VV05G05780 | 1 | |
| Anchor point | 1-to-1 | VV05G05780 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | VV11G05920 | 1 | ||
| Zea mays | Tree-based ortholog | 1-to-1 | ZM04G03090 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ZM09G13260 | 1 |