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Integrative Orthology Viewer:
AT1G03880
(Arabidopsis thaliana)
Inparalogs
| Organism | Source | Genes | #genes | Details |
|---|---|---|---|---|
| Arabidopsis thaliana | Orthologous gene family | AT1G03880 AT4G28520 AT5G44120 | 3 |  |
| Tree-based ortholog | AT1G03880 | 1 | ||
| Anchor point | AT4G28520 AT5G44120 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | AT1G03880 | 1 |
Orthologs
| Organism | Source | Type | Genes | #genes | Details |
|---|---|---|---|---|---|
| Amborella trichopoda | Tree-based ortholog | 1-to-many | ATR_00067G00070 ATR_00067G00110 ATR_00067G00120 | 3 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | ATR_00067G00070 ATR_00067G00110 ATR_00067G00120 | 3 | ||
| Arabidopsis lyrata | Orthologous gene family | many-to-many | AL1G03200 AL8G05800 | 2 | |
| Tree-based ortholog | 1-to-1 | AL1G03200 | 1 | ||
| Anchor point | many-to-many | AL1G03200 AL7G13290 AL8G05800 | 3 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AL1G03200 | 1 | ||
| Beta vulgaris | Orthologous gene family | many-to-1 | BV4G00050 | 1 | |
| Tree-based ortholog | 1-to-1 | BV5G14430 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BV3G09410 | 1 | ||
| Brassica rapa | Orthologous gene family | many-to-many | BR00G07160 BR01G08600 BR06G38270 ... | 5 | |
| Tree-based ortholog | 1-to-1 | BR10G03750 | 1 | ||
| Anchor point | many-to-many | BR01G08600 BR09G53800 BR10G03750 ... | 5 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BR10G03750 | 1 | ||
| Capsella rubella | Orthologous gene family | many-to-many | CRU_001G02790 CRU_007G11460 CRU_008G04310 ... | 5 | |
| Tree-based ortholog | 1-to-1 | CRU_001G02790 | 1 | ||
| Anchor point | many-to-many | CRU_001G02790 CRU_007G11460 CRU_008G04310 | 3 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CRU_001G02790 | 1 | ||
| Carica papaya | Orthologous gene family | many-to-1 | CP00165G00080 | 1 | |
| Tree-based ortholog | 1-to-many | CP00165G00070 CP00165G00080 | 2 | ||
| Anchor point | many-to-1 | CP00165G00070 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CP00165G00080 | 1 | ||
| Citrullus lanatus | Tree-based ortholog | 1-to-many | CL07G01960 CL07G01970 | 2 | |
| Anchor point | many-to-many | CL06G06830 CL07G01950 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CL06G06830 | 1 | ||
| Citrus sinensis | Orthologous gene family | many-to-1 | CS00060G00820 | 1 | |
| Tree-based ortholog | 1-to-1 | CS00060G00820 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CS00088G00230 | 1 | ||
| Cucumis melo | Orthologous gene family | many-to-many | CM00018G01090 CM00018G01100 | 2 | |
| Tree-based ortholog | 1-to-many | CM00018G01090 CM00018G01100 | 2 | ||
| Anchor point | many-to-1 | CM00018G01090 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | CM00018G01100 CM00018G01090 | 2 | ||
| Eucalyptus grandis | Orthologous gene family | many-to-1 | EG0002G12790 | 1 | |
| Tree-based ortholog | 1-to-1 | EG0002G12790 | 1 | ||
| Anchor point | many-to-1 | EG0008G24620 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | EG0002G12790 | 1 | ||
| Fragaria vesca | Orthologous gene family | many-to-many | FV2G09190 FV2G09200 FV2G09210 ... | 7 | |
| Tree-based ortholog | 1-to-many | FV2G09200 FV2G09210 FV2G09240 ... | 7 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | FV2G09240 FV2G09210 FV2G09200 ... | 7 | ||
| Glycine max | Orthologous gene family | many-to-many | GM03G32030 GM19G34780 | 2 | |
| Tree-based ortholog | 1-to-many | GM19G34780 GM03G32030 GM03G32020 ... | 6 | ||
| Anchor point | many-to-many | GM19G34770 GM03G32020 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | GM19G34780 GM03G32030 | 2 | ||
| Gossypium raimondii | Orthologous gene family | many-to-1 | GR04G05720 | 1 | |
| Tree-based ortholog | 1-to-1 | GR04G05720 | 1 | ||
| Anchor point | many-to-many | GR11G17440 GR04G05720 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | GR04G05720 | 1 | ||
| Lotus japonicus | Orthologous gene family | many-to-many | LJ1G061710 LJ1G061750 | 2 | |
| Tree-based ortholog | 1-to-many | LJ1G061750 LJ1G061710 LJ1G061700 ... | 6 | ||
| Anchor point | many-to-1 | LJ5G020440 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | LJ1G061710 LJ1G061750 | 2 | ||
| Malus domestica | Orthologous gene family | many-to-1 | MD00G096320 | 1 | |
| Tree-based ortholog | 1-to-many | MD05G011880 MD00G230400 MD00G230410 ... | 4 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | MD00G096320 | 1 | ||
| Manihot esculenta | Orthologous gene family | many-to-1 | ME09880G00340 | 1 | |
| Tree-based ortholog | 1-to-1 | ME06715G00020 | 1 | ||
| Anchor point | many-to-many | ME10563G01250 ME01551G00920 ME09880G00320 | 3 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ME09880G00340 | 1 | ||
| Medicago truncatula | Orthologous gene family | many-to-many | MT7G096990 MT7G097000 | 2 | |
| Tree-based ortholog | 1-to-many | MT7G096990 MT7G097000 MT7G096970 ... | 7 | ||
| Anchor point | many-to-1 | MT1G069920 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | MT7G096990 MT7G097000 | 2 | ||
| Oryza sativa ssp. japonica | Orthologous gene family | many-to-many | OS01G55690 OS02G14600 OS02G15070 ... | 13 | |
| Tree-based ortholog | 1-to-many | OS02G25640 OS02G25860 OS10G26060 ... | 15 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | OS02G15070 OS02G14600 OS02G16820 ... | 12 | ||
| Populus trichocarpa | Orthologous gene family | many-to-many | PT02G03810 PT05G22470 | 2 | |
| Tree-based ortholog | 1-to-many | PT05G22470 PT02G03810 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PT05G22470 PT02G03810 | 2 | ||
| Prunus persica | Orthologous gene family | many-to-many | PPE_008G23710 PPE_008G23730 | 2 | |
| Tree-based ortholog | 1-to-many | PPE_008G23710 PPE_008G23730 | 2 | ||
| Anchor point | many-to-1 | PPE_008G23710 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PPE_008G23710 | 1 | ||
| Ricinus communis | Orthologous gene family | many-to-many | RC29600G00270 RC29600G00300 RC29611G00020 ... | 6 | |
| Tree-based ortholog | 1-to-many | RC30005G00550 RC57219G00010 RC30005G00540 ... | 7 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | RC30005G00530 RC29600G00300 RC30005G00550 ... | 6 | ||
| Solanum lycopersicum | Orthologous gene family | many-to-1 | SL09G025210 | 1 | |
| Tree-based ortholog | 1-to-1 | SL09G025210 | 1 | ||
| Anchor point | many-to-1 | SL09G090150 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | SL09G025210 | 1 | ||
| Solanum tuberosum | Orthologous gene family | many-to-1 | ST09G019610 | 1 | |
| Tree-based ortholog | 1-to-1 | ST09G019610 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ST09G019610 | 1 | ||
| Thellungiella parvula | Orthologous gene family | many-to-1 | TP1G02740 | 1 | |
| Tree-based ortholog | 1-to-1 | TP1G02740 | 1 | ||
| Anchor point | many-to-many | TP1G02740 TP2G08950 TP7G26500 | 3 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TP1G02740 | 1 | ||
| Theobroma cacao | Orthologous gene family | many-to-1 | TC0001G25610 | 1 | |
| Tree-based ortholog | 1-to-1 | TC0001G25610 | 1 | ||
| Anchor point | many-to-1 | TC0001G25610 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TC0001G25610 | 1 | ||
| Vitis vinifera | Orthologous gene family | many-to-many | VV07G10960 VV07G10980 | 2 | |
| Tree-based ortholog | 1-to-many | VV07G10970 VV07G10980 VV07G10960 | 3 | ||
| Anchor point | many-to-1 | VV07G10960 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | VV07G10960 VV07G10980 | 2 | ||
| Zea mays | Orthologous gene family | many-to-1 | ZM06G05380 | 1 | |
| Tree-based ortholog | 1-to-1 | ZM06G05380 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ZM06G05380 | 1 |