Integrative Orthology Viewer: AT1G03790 (Arabidopsis thaliana)
Inparalogs
Organism | Source | Genes | #genes | Details |
---|---|---|---|---|
Arabidopsis thaliana | Orthologous gene family | AT1G03790 | 1 | |
Tree-based ortholog | AT1G03790 | 1 | ||
Anchor point | AT5G44260 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | AT1G03790 | 1 |
Orthologs
Organism | Source | Type | Genes | #genes | Details |
---|---|---|---|---|---|
Amborella trichopoda | Orthologous gene family | 1-to-1 | ATR_00183G00270 | 1 | |
Tree-based ortholog | 1-to-1 | ATR_00069G02120 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ATR_00183G00270 | 1 | ||
Arabidopsis lyrata | Orthologous gene family | 1-to-1 | AL1G03110 | 1 | |
Tree-based ortholog | 1-to-1 | AL1G03110 | 1 | ||
Anchor point | 1-to-many | AL1G03110 AL8G05640 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AL1G03110 | 1 | ||
Beta vulgaris | Orthologous gene family | 1-to-1 | BV9G09110 | 1 | |
Tree-based ortholog | 1-to-1 | BV9G09110 | 1 | ||
Anchor point | 1-to-1 | BV9G09110 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BV9G09110 | 1 | ||
Brassica rapa | Orthologous gene family | 1-to-many | BR08G31630 BR10G03860 | 2 | |
Tree-based ortholog | 1-to-1 | BR10G03860 | 1 | ||
Anchor point | 1-to-many | BR06G38180 BR08G31630 BR10G03860 ... | 4 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BR10G03860 | 1 | ||
Capsella rubella | Orthologous gene family | 1-to-1 | CRU_001G02700 | 1 | |
Tree-based ortholog | 1-to-1 | CRU_001G02700 | 1 | ||
Anchor point | 1-to-many | CRU_008G04170 CRU_001G02700 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CRU_001G02700 | 1 | ||
Carica papaya | Tree-based ortholog | 1-to-many | CP00013G02320 CP01427G00010 | 2 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CP00092G00230 | 1 | ||
Chlamydomonas reinhardtii | Tree-based ortholog | 1-to-1 | CR13G01070 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CR13G01070 | 1 | ||
Citrullus lanatus | Orthologous gene family | 1-to-1 | CL07G00940 | 1 | |
Tree-based ortholog | 1-to-1 | CL07G00940 | 1 | ||
Anchor point | 1-to-1 | CL07G00940 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CL07G00940 | 1 | ||
Citrus sinensis | Orthologous gene family | 1-to-1 | CS00643G00010 | 1 | |
Tree-based ortholog | 1-to-1 | CS00643G00010 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CS00643G00010 | 1 | ||
Cucumis melo | Orthologous gene family | 1-to-1 | CM00034G03340 | 1 | |
Tree-based ortholog | 1-to-1 | CM00034G03340 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CM00034G03340 | 1 | ||
Eucalyptus grandis | Orthologous gene family | 1-to-1 | EG0001G15200 | 1 | |
Tree-based ortholog | 1-to-1 | EG0001G15200 | 1 | ||
Anchor point | 1-to-1 | EG0001G15200 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | EG0001G15200 | 1 | ||
Fragaria vesca | Orthologous gene family | 1-to-1 | FV5G15650 | 1 | |
Tree-based ortholog | 1-to-1 | FV5G15650 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | FV5G15650 | 1 | ||
Glycine max | Orthologous gene family | 1-to-many | GM12G33320 GM13G37101 | 2 | |
Tree-based ortholog | 1-to-1 | GM13G37101 | 1 | ||
Anchor point | 1-to-many | GM12G13300 GM13G37101 GM06G44440 ... | 4 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | GM13G37101 GM12G33320 | 2 | ||
Gossypium raimondii | Orthologous gene family | 1-to-many | GR00G02370 GR02G02010 | 2 | |
Tree-based ortholog | 1-to-many | GR00G02370 GR02G02010 | 2 | ||
Anchor point | 1-to-1 | GR02G02010 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | GR02G02010 GR00G02370 | 2 | ||
Lotus japonicus | Tree-based ortholog | 1-to-1 | LJ4G047760 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | LJ4G047760 | 1 | ||
Malus domestica | Orthologous gene family | 1-to-many | MD00G254600 MD09G027940 MD17G017710 | 3 | |
Tree-based ortholog | 1-to-many | MD00G254600 MD17G017710 MD09G027940 | 3 | ||
Anchor point | 1-to-1 | MD09G027940 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | MD00G254600 MD09G027940 MD17G017710 | 3 | ||
Manihot esculenta | Orthologous gene family | 1-to-many | ME02307G00340 ME08232G00080 | 2 | |
Tree-based ortholog | 1-to-many | ME02307G00340 ME08232G00080 | 2 | ||
Anchor point | 1-to-1 | ME02307G00340 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | ME02307G00340 ME08232G00080 | 2 | ||
Medicago truncatula | Orthologous gene family | 1-to-1 | MT2G090605 | 1 | |
Tree-based ortholog | 1-to-many | MT4G078660 MT2G090605 | 2 | ||
Anchor point | 1-to-many | MT2G090605 MT4G078660 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | MT2G090605 | 1 | ||
Oryza sativa ssp. japonica | Tree-based ortholog | 1-to-many | OS07G47240 OS01G53650 OS05G45020 ... | 5 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OS05G10670 | 1 | ||
Ostreococcus lucimarinus | Tree-based ortholog | 1-to-1 | OL04G00330 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OL04G00330 | 1 | ||
Physcomitrella patens | Tree-based ortholog | 1-to-many | PP00117G00780 PP00241G00660 PP00177G00540 ... | 21 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PP00297G00210 PP00297G00180 PP00177G00540 | 3 | ||
Populus trichocarpa | Orthologous gene family | 1-to-many | PT07G13830 PT17G01340 | 2 | |
Tree-based ortholog | 1-to-1 | PT07G13830 | 1 | ||
Anchor point | 1-to-many | PT17G01340 PT07G13830 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PT17G01340 PT07G13830 | 2 | ||
Prunus persica | Orthologous gene family | 1-to-1 | PPE_009G01200 | 1 | |
Tree-based ortholog | 1-to-1 | PPE_009G01200 | 1 | ||
Anchor point | 1-to-1 | PPE_009G01200 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PPE_009G01200 | 1 | ||
Ricinus communis | Orthologous gene family | 1-to-1 | RC29983G00490 | 1 | |
Tree-based ortholog | 1-to-1 | RC29983G00490 | 1 | ||
Anchor point | 1-to-1 | RC29983G00490 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | RC29983G00490 | 1 | ||
Solanum lycopersicum | Orthologous gene family | 1-to-1 | SL07G053750 | 1 | |
Tree-based ortholog | 1-to-1 | SL07G053750 | 1 | ||
Anchor point | 1-to-1 | SL07G053750 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | SL07G053750 | 1 | ||
Solanum tuberosum | Orthologous gene family | 1-to-1 | ST07G021520 | 1 | |
Tree-based ortholog | 1-to-1 | ST07G021520 | 1 | ||
Anchor point | 1-to-1 | ST07G021520 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ST07G021520 | 1 | ||
Thellungiella parvula | Orthologous gene family | 1-to-1 | TP1G02650 | 1 | |
Tree-based ortholog | 1-to-1 | TP1G02650 | 1 | ||
Anchor point | 1-to-many | TP2G09070 TP1G02650 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TP1G02650 | 1 | ||
Theobroma cacao | Orthologous gene family | 1-to-1 | TC0002G17840 | 1 | |
Tree-based ortholog | 1-to-1 | TC0002G17840 | 1 | ||
Anchor point | 1-to-1 | TC0002G17840 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TC0002G17840 | 1 | ||
Vitis vinifera | Tree-based ortholog | 1-to-many | VV16G01840 VV04G07760 VV11G04150 | 3 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | VV11G04150 | 1 | ||
Zea mays | Tree-based ortholog | 1-to-1 | ZM02G37170 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ZM03G02190 | 1 |