Expansion plot
Gene family finder
Ks-graphs
Skyline plot
Synteny plot
WGDotplot
Functional clusters
WGMapping
BLAST
Workbench
Integrative Orthology Viewer:
AT1G03780
(Arabidopsis thaliana)
Inparalogs
| Organism | Source | Genes | #genes | Details |
|---|---|---|---|---|
| Arabidopsis thaliana | Orthologous gene family | AT1G03780 | 1 |  |
| Tree-based ortholog | AT1G03780 | 1 | ||
| Anchor point | AT5G44270 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | AT1G03780 | 1 |
Orthologs
| Organism | Source | Type | Genes | #genes | Details |
|---|---|---|---|---|---|
| Amborella trichopoda | Orthologous gene family | 1-to-1 | ATR_00062G02290 | 1 | |
| Tree-based ortholog | 1-to-1 | ATR_00062G02290 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ATR_00062G02290 | 1 | ||
| Arabidopsis lyrata | Orthologous gene family | 1-to-1 | AL1G03090 | 1 | |
| Tree-based ortholog | 1-to-1 | AL1G03090 | 1 | ||
| Anchor point | 1-to-many | AL1G03090 AL8G05620 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AL1G03090 | 1 | ||
| Beta vulgaris | Orthologous gene family | 1-to-1 | BV9G09140 | 1 | |
| Tree-based ortholog | 1-to-1 | BV9G09140 | 1 | ||
| Anchor point | 1-to-1 | BV9G09140 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BV9G09140 | 1 | ||
| Brassica rapa | Orthologous gene family | 1-to-many | BR09G53840 BR10G03870 | 2 | |
| Tree-based ortholog | 1-to-1 | BR09G53840 | 1 | ||
| Anchor point | 1-to-many | BR09G53840 BR10G03870 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BR10G03870 | 1 | ||
| Capsella rubella | Orthologous gene family | 1-to-1 | CRU_001G02690 | 1 | |
| Tree-based ortholog | 1-to-1 | CRU_001G02690 | 1 | ||
| Anchor point | 1-to-1 | CRU_001G02690 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CRU_001G02690 | 1 | ||
| Carica papaya | Orthologous gene family | 1-to-1 | CP00083G00720 | 1 | |
| Tree-based ortholog | 1-to-1 | CP00083G00720 | 1 | ||
| Anchor point | 1-to-1 | CP00083G00720 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CP00083G00720 | 1 | ||
| Chlamydomonas reinhardtii | Orthologous gene family | 1-to-1 | CR11G05250 | 1 | |
| Tree-based ortholog | 1-to-1 | CR11G05250 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CR11G05250 | 1 | ||
| Citrullus lanatus | Orthologous gene family | 1-to-1 | CL07G00920 | 1 | |
| Tree-based ortholog | 1-to-1 | CL07G00920 | 1 | ||
| Anchor point | 1-to-1 | CL07G00920 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CL07G00920 | 1 | ||
| Citrus sinensis | Orthologous gene family | 1-to-1 | CS00643G00040 | 1 | |
| Tree-based ortholog | 1-to-1 | CS00643G00040 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CS00643G00040 | 1 | ||
| Cucumis melo | Orthologous gene family | 1-to-1 | CM00034G03320 | 1 | |
| Tree-based ortholog | 1-to-1 | CM00034G03320 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CM00034G03320 | 1 | ||
| Eucalyptus grandis | Orthologous gene family | 1-to-1 | EG0001G15160 | 1 | |
| Tree-based ortholog | 1-to-1 | EG0001G15160 | 1 | ||
| Anchor point | 1-to-1 | EG0001G15160 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | EG0001G15160 | 1 | ||
| Fragaria vesca | Orthologous gene family | 1-to-1 | FV6G21770 | 1 | |
| Tree-based ortholog | 1-to-many | FV5G38770 FV6G21040 FV5G38710 ... | 6 | ||
| Anchor point | 1-to-1 | FV6G21770 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | FV6G21770 | 1 | ||
| Glycine max | Orthologous gene family | 1-to-many | GM06G44460 GM12G13280 | 2 | |
| Tree-based ortholog | 1-to-many | GM18G26790 GM06G44460 GM12G13280 | 3 | ||
| Anchor point | 1-to-many | GM06G44460 GM12G13280 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | GM06G44460 GM12G13280 | 2 | ||
| Gossypium raimondii | Orthologous gene family | 1-to-many | GR02G01990 GR05G20030 | 2 | |
| Tree-based ortholog | 1-to-many | GR02G01990 GR05G20030 | 2 | ||
| Anchor point | 1-to-many | GR05G20030 GR02G01990 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | GR02G01990 | 1 | ||
| Lotus japonicus | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | LJ2G035360 | 1 | |
| Malus domestica | Orthologous gene family | 1-to-many | MD09G028030 MD17G017750 | 2 | |
| Tree-based ortholog | 1-to-many | MD09G028030 MD17G017750 | 2 | ||
| Anchor point | 1-to-1 | MD09G028030 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | MD17G017750 | 1 | ||
| Manihot esculenta | Orthologous gene family | 1-to-1 | ME02307G00380 | 1 | |
| Tree-based ortholog | 1-to-1 | ME02307G00380 | 1 | ||
| Anchor point | 1-to-1 | ME02307G00380 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ME02307G00380 | 1 | ||
| Medicago truncatula | Orthologous gene family | 1-to-1 | MT4G078565 | 1 | |
| Tree-based ortholog | 1-to-1 | MT5G459310 | 1 | ||
| Anchor point | 1-to-1 | MT4G078565 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | MT4G078565 | 1 | ||
| Oryza sativa ssp. japonica | Orthologous gene family | 1-to-1 | OS07G32390 | 1 | |
| Tree-based ortholog | 1-to-many | OS07G32390 OS02G22800 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OS07G32390 | 1 | ||
| Physcomitrella patens | Orthologous gene family | 1-to-many | PP00016G00510 PP00021G00290 PP00105G00350 | 3 | |
| Tree-based ortholog | 1-to-1 | PP00105G00340 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PP00105G00350 PP00016G00510 PP00021G00290 | 3 | ||
| Populus trichocarpa | Orthologous gene family | 1-to-many | PT07G13860 PT17G01310 | 2 | |
| Tree-based ortholog | 1-to-many | PT17G01310 PT07G13860 | 2 | ||
| Anchor point | 1-to-many | PT17G01310 PT07G13860 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PT17G01310 PT07G13860 | 2 | ||
| Prunus persica | Orthologous gene family | 1-to-1 | PPE_009G00540 | 1 | |
| Tree-based ortholog | 1-to-1 | PPE_009G00540 | 1 | ||
| Anchor point | 1-to-1 | PPE_009G00540 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PPE_009G00540 | 1 | ||
| Ricinus communis | Orthologous gene family | 1-to-1 | RC29983G00540 | 1 | |
| Tree-based ortholog | 1-to-1 | RC29983G00540 | 1 | ||
| Anchor point | 1-to-1 | RC29983G00540 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | RC29983G00540 | 1 | ||
| Solanum lycopersicum | Orthologous gene family | 1-to-many | SL07G053790 SL10G008210 SL12G005480 | 3 | |
| Tree-based ortholog | 1-to-many | SL12G005480 SL07G053790 SL10G008210 | 3 | ||
| Anchor point | 1-to-many | SL10G008210 SL07G053790 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | SL07G053790 | 1 | ||
| Solanum tuberosum | Orthologous gene family | 1-to-many | ST07G021460 ST10G008690 ST12G012280 | 3 | |
| Tree-based ortholog | 1-to-many | ST12G012280 ST07G021460 ST10G008690 | 3 | ||
| Anchor point | 1-to-many | ST07G021460 ST10G008690 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ST07G021460 | 1 | ||
| Thellungiella parvula | Orthologous gene family | 1-to-many | TP1G02640 TP2G09090 | 2 | |
| Tree-based ortholog | 1-to-1 | TP1G02640 | 1 | ||
| Anchor point | 1-to-many | TP2G09090 TP1G02640 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TP1G02640 | 1 | ||
| Theobroma cacao | Orthologous gene family | 1-to-1 | TC0002G17810 | 1 | |
| Tree-based ortholog | 1-to-1 | TC0002G17810 | 1 | ||
| Anchor point | 1-to-1 | TC0002G17810 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TC0002G17810 | 1 | ||
| Vitis vinifera | Orthologous gene family | 1-to-1 | VV12G01830 | 1 | |
| Tree-based ortholog | 1-to-1 | VV12G01830 | 1 | ||
| Anchor point | 1-to-1 | VV12G01830 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | VV12G01830 | 1 | ||
| Zea mays | Orthologous gene family | 1-to-many | ZM02G36020 ZM07G22640 | 2 | |
| Tree-based ortholog | 1-to-many | ZM07G22640 ZM02G36020 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | ZM02G36020 ZM07G22640 | 2 |