Integrative Orthology Viewer: AL8G33030 (Arabidopsis lyrata)
Inparalogs
Organism | Source | Genes | #genes | Details |
---|---|---|---|---|
Arabidopsis lyrata | Orthologous gene family | AL8G33030 | 1 | |
Tree-based ortholog | AL8G33030 | 1 | ||
Anchor point | AL5G19360 AL7G03100 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | AL8G33030 | 1 |
Orthologs
Organism | Source | Type | Genes | #genes | Details |
---|---|---|---|---|---|
Amborella trichopoda | Tree-based ortholog | 1-to-1 | ATR_00137G00390 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ATR_00137G00390 | 1 | ||
Arabidopsis thaliana | Orthologous gene family | 1-to-1 | AT5G67420 | 1 | |
Tree-based ortholog | 1-to-1 | AT5G67420 | 1 | ||
Anchor point | many-to-many | AT3G49940 AT4G37540 AT5G67420 | 3 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AT5G67420 | 1 | ||
Beta vulgaris | Tree-based ortholog | 1-to-1 | BV6G23370 | 1 | |
Anchor point | many-to-1 | BV6G23370 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BV6G23370 | 1 | ||
Brassica rapa | Orthologous gene family | 1-to-1 | BR07G11070 | 1 | |
Tree-based ortholog | 1-to-1 | BR09G07530 | 1 | ||
Anchor point | many-to-many | BR07G11070 BR09G31970 BR02G41380 ... | 7 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BR07G11070 | 1 | ||
Capsella rubella | Orthologous gene family | 1-to-1 | CRU_008G26220 | 1 | |
Tree-based ortholog | 1-to-1 | CRU_008G26220 | 1 | ||
Anchor point | many-to-many | CRU_008G26220 CRU_007G02540 CRU_005G15240 | 3 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CRU_008G26220 | 1 | ||
Carica papaya | Tree-based ortholog | 1-to-1 | CP00006G00390 | 1 | |
Anchor point | many-to-many | CP00106G00610 CP00006G00390 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CP00006G00390 | 1 | ||
Citrullus lanatus | Tree-based ortholog | 1-to-1 | CL01G17730 | 1 | |
Anchor point | many-to-many | CL01G17730 CL05G21660 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CL01G17730 | 1 | ||
Citrus sinensis | Tree-based ortholog | 1-to-1 | CS00006G01170 | 1 | |
Anchor point | many-to-many | CS00004G04240 CS00084G00240 CS00006G01170 | 3 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CS00006G01170 | 1 | ||
Cucumis melo | Tree-based ortholog | 1-to-1 | CM00007G06480 | 1 | |
Anchor point | many-to-many | CM00029G01850 CM00007G06480 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CM00007G06480 | 1 | ||
Eucalyptus grandis | Tree-based ortholog | 1-to-1 | EG0008G18430 | 1 | |
Anchor point | many-to-1 | EG0008G18430 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | EG0008G18430 | 1 | ||
Fragaria vesca | Tree-based ortholog | 1-to-1 | FV0G18970 | 1 | |
Anchor point | many-to-many | FV0G18970 FV2G31380 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | FV0G18970 | 1 | ||
Glycine max | Tree-based ortholog | 1-to-many | GM01G40010 GM11G05280 GM17G17540 ... | 4 | |
Anchor point | many-to-many | GM14G09750 GM04G04750 GM11G05280 ... | 9 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | GM11G05280 GM01G40010 | 2 | ||
Gossypium raimondii | Tree-based ortholog | 1-to-many | GR07G22200 GR08G08110 GR07G05630 | 3 | |
Anchor point | many-to-many | GR08G08110 GR05G23250 GR07G05630 ... | 6 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | GR07G22200 | 1 | ||
Lotus japonicus | Tree-based ortholog | 1-to-1 | LJ4G015120 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | LJ4G015120 | 1 | ||
Malus domestica | Tree-based ortholog | 1-to-many | MD00G351050 MD15G023440 MD02G016340 | 3 | |
Anchor point | many-to-many | MD08G010060 MD15G023440 MD15G002060 ... | 4 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | MD15G023440 MD00G351050 MD02G016340 | 3 | ||
Manihot esculenta | Tree-based ortholog | 1-to-many | ME03363G00170 ME10878G00160 | 2 | |
Anchor point | many-to-many | ME03363G00170 ME10878G00160 ME09870G00250 | 3 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | ME03363G00170 ME10878G00160 | 2 | ||
Medicago truncatula | Tree-based ortholog | 1-to-many | MT5G015880 MT4G095600 | 2 | |
Anchor point | many-to-many | MT5G015880 MT4G095600 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | MT4G095600 | 1 | ||
Oryza sativa ssp. japonica | Tree-based ortholog | 1-to-many | OS07G40000 OS03G33090 | 2 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | OS07G40000 OS03G33090 | 2 | ||
Physcomitrella patens | Tree-based ortholog | 1-to-many | PP00167G00190 PP00019G00960 PP00041G00240 ... | 7 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PP00041G00240 PP00203G00160 PP00167G00190 ... | 4 | ||
Populus trichocarpa | Tree-based ortholog | 1-to-many | PT07G05360 PT00G01630 PT05G14550 | 3 | |
Anchor point | many-to-many | PT14G01740 PT07G05360 PT02G11940 ... | 5 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PT00G01630 PT07G05360 PT05G14550 | 3 | ||
Prunus persica | Tree-based ortholog | 1-to-1 | PPE_006G23200 | 1 | |
Anchor point | many-to-many | PPE_001G42880 PPE_006G23200 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PPE_006G23200 | 1 | ||
Ricinus communis | Tree-based ortholog | 1-to-1 | RC29661G00040 | 1 | |
Anchor point | many-to-many | RC29661G00040 RC28152G00340 RC30170G01170 | 3 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | RC29661G00040 | 1 | ||
Solanum lycopersicum | Tree-based ortholog | 1-to-1 | SL02G092550 | 1 | |
Anchor point | many-to-many | SL02G092550 SL04G077990 SL01G107190 | 3 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | SL02G092550 | 1 | ||
Solanum tuberosum | Tree-based ortholog | 1-to-1 | ST02G031040 | 1 | |
Anchor point | many-to-many | ST04G031010 ST02G031040 ST01G044380 | 3 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ST02G031040 | 1 | ||
Thellungiella parvula | Orthologous gene family | 1-to-1 | TP2G29230 | 1 | |
Tree-based ortholog | 1-to-1 | TP2G29230 | 1 | ||
Anchor point | many-to-many | TP5G12170 TP7G35220 TP2G29230 | 3 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TP2G29230 | 1 | ||
Theobroma cacao | Tree-based ortholog | 1-to-1 | TC0001G06700 | 1 | |
Anchor point | many-to-many | TC0008G08730 TC0002G11040 TC0001G06700 | 3 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TC0001G06700 | 1 | ||
Vitis vinifera | Tree-based ortholog | 1-to-1 | VV07G00320 | 1 | |
Anchor point | many-to-many | VV03G10000 VV07G00320 VV18G06090 | 3 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | VV07G00320 | 1 | ||
Zea mays | Tree-based ortholog | 1-to-1 | ZM02G38100 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ZM02G38100 | 1 |