Integrative Orthology Viewer: AL8G24170 (Arabidopsis lyrata)
Inparalogs
Organism | Source | Genes | #genes | Details |
---|---|---|---|---|
Arabidopsis lyrata | Orthologous gene family | AL5G21280 AL8G24170 | 2 | |
Tree-based ortholog | AL8G24170 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | AL8G24170 | 1 |
Orthologs
Organism | Source | Type | Genes | #genes | Details |
---|---|---|---|---|---|
Amborella trichopoda | Orthologous gene family | many-to-1 | ATR_00007G01900 | 1 | |
Tree-based ortholog | 1-to-1 | ATR_00007G01900 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ATR_00007G01900 | 1 | ||
Arabidopsis thaliana | Orthologous gene family | many-to-1 | AT5G58350 | 1 | |
Tree-based ortholog | 1-to-1 | AT5G58350 | 1 | ||
Anchor point | N/A | AT5G58350 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AT5G58350 | 1 | ||
Beta vulgaris | Orthologous gene family | many-to-many | BV7G08240 BV7G10090 | 2 | |
Tree-based ortholog | 1-to-1 | BV7G08240 | 1 | ||
Anchor point | N/A | BV7G08240 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BV7G08240 | 1 | ||
Brassica rapa | Orthologous gene family | many-to-many | BR03G11070 BR09G33270 | 2 | |
Tree-based ortholog | 1-to-many | BR03G11070 BR10G11250 | 2 | ||
Anchor point | N/A | BR03G11070 BR10G11250 BR02G12850 | 3 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BR10G11250 | 1 | ||
Capsella rubella | Orthologous gene family | many-to-many | CRU_005G16870 CRU_008G18430 | 2 | |
Tree-based ortholog | 1-to-1 | CRU_008G18430 | 1 | ||
Anchor point | N/A | CRU_008G18430 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CRU_008G18430 | 1 | ||
Carica papaya | Orthologous gene family | many-to-1 | CP00086G00360 | 1 | |
Tree-based ortholog | 1-to-1 | CP00086G00360 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CP00086G00360 | 1 | ||
Chlamydomonas reinhardtii | Tree-based ortholog | 1-to-many | CR14G03650 CR06G13920 CR01G09890 ... | 6 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | CR01G08700 CR01G08690 | 2 | ||
Citrullus lanatus | Orthologous gene family | many-to-many | CL02G19280 CL04G06390 | 2 | |
Tree-based ortholog | 1-to-1 | CL02G19280 | 1 | ||
Anchor point | N/A | CL02G19280 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CL02G19280 | 1 | ||
Citrus sinensis | Orthologous gene family | many-to-many | CS00233G00200 CS01217G00010 CS08961G00010 | 3 | |
Tree-based ortholog | 1-to-1 | CS01217G00010 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CS01217G00010 | 1 | ||
Cucumis melo | Orthologous gene family | many-to-many | CM00076G00090 CM00113G00070 | 2 | |
Tree-based ortholog | 1-to-1 | CM00113G00070 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CM00113G00070 | 1 | ||
Eucalyptus grandis | Orthologous gene family | many-to-many | EG0001G05580 EG0010G15930 | 2 | |
Tree-based ortholog | 1-to-1 | EG0010G15930 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | EG0010G15930 | 1 | ||
Fragaria vesca | Orthologous gene family | many-to-many | FV3G31490 FV6G08930 | 2 | |
Tree-based ortholog | 1-to-1 | FV3G31490 | 1 | ||
Anchor point | N/A | FV3G31490 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | FV3G31490 | 1 | ||
Glycine max | Orthologous gene family | many-to-many | GM01G32450 GM02G40200 GM03G04450 ... | 8 | |
Tree-based ortholog | 1-to-many | GM18G06076 GM11G26210 GM02G40200 ... | 4 | ||
Anchor point | N/A | GM18G06076 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | GM02G40200 GM14G38390 | 2 | ||
Gossypium raimondii | Orthologous gene family | many-to-many | GR11G12890 GR13G27210 | 2 | |
Tree-based ortholog | 1-to-1 | GR13G27210 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | GR13G27210 | 1 | ||
Lotus japonicus | Orthologous gene family | many-to-1 | LJ2G040390 | 1 | |
Tree-based ortholog | 1-to-1 | LJ2G040390 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | LJ2G040390 | 1 | ||
Malus domestica | Orthologous gene family | many-to-many | MD00G261910 MD04G013910 MD11G004210 ... | 4 | |
Tree-based ortholog | 1-to-1 | MD11G004210 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | MD11G004210 | 1 | ||
Manihot esculenta | Orthologous gene family | many-to-many | ME03438G00020 ME03718G00390 ME05084G00070 | 3 | |
Tree-based ortholog | 1-to-1 | ME03438G00020 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ME03438G00020 | 1 | ||
Medicago truncatula | Orthologous gene family | many-to-many | MT4G028830 MT5G075220 MT6G016260 ... | 5 | |
Tree-based ortholog | 1-to-many | MT6G016260 MT5G075220 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | MT5G075220 | 1 | ||
Oryza sativa ssp. japonica | Orthologous gene family | many-to-many | OS11G02300 OS11G02305 OS12G02250 | 3 | |
Tree-based ortholog | 1-to-many | OS11G02305 OS12G02250 OS11G02300 | 3 | ||
Anchor point | N/A | OS11G02300 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OS07G38530 | 1 | ||
Ostreococcus lucimarinus | Tree-based ortholog | 1-to-1 | OL08G00140 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OL08G00140 | 1 | ||
Physcomitrella patens | Tree-based ortholog | 1-to-many | PP00237G00010 PP00384G00020 | 2 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PP00384G00020 | 1 | ||
Populus trichocarpa | Orthologous gene family | many-to-many | PT13G15510 PT16G13460 PT19G12860 | 3 | |
Tree-based ortholog | 1-to-many | PT19G12860 PT13G15510 | 2 | ||
Anchor point | N/A | PT19G12860 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PT13G15510 PT19G12860 | 2 | ||
Prunus persica | Orthologous gene family | many-to-many | PPE_004G07000 PPE_006G03110 | 2 | |
Tree-based ortholog | 1-to-1 | PPE_006G03110 | 1 | ||
Anchor point | N/A | PPE_006G03110 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PPE_006G03110 | 1 | ||
Ricinus communis | Orthologous gene family | many-to-many | RC29044G00020 RC29804G00120 | 2 | |
Tree-based ortholog | 1-to-1 | RC29804G00120 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | RC29804G00120 | 1 | ||
Solanum lycopersicum | Orthologous gene family | many-to-many | SL06G082470 SL09G018170 | 2 | |
Tree-based ortholog | 1-to-1 | SL06G082470 | 1 | ||
Anchor point | N/A | SL06G082470 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | SL06G082470 | 1 | ||
Solanum tuberosum | Orthologous gene family | many-to-many | ST06G033260 ST09G015980 | 2 | |
Tree-based ortholog | 1-to-1 | ST06G033260 | 1 | ||
Anchor point | N/A | ST06G033260 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ST06G033260 | 1 | ||
Thellungiella parvula | Orthologous gene family | many-to-many | TP5G10640 TP6G20010 | 2 | |
Tree-based ortholog | 1-to-1 | TP6G20010 | 1 | ||
Anchor point | N/A | TP6G20010 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TP6G20010 | 1 | ||
Theobroma cacao | Orthologous gene family | many-to-many | TC0004G15910 TC0009G35530 | 2 | |
Tree-based ortholog | 1-to-1 | TC0009G35530 | 1 | ||
Anchor point | N/A | TC0009G35530 TC0004G15910 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TC0009G35530 | 1 | ||
Vitis vinifera | Orthologous gene family | many-to-many | VV06G00540 VV08G05980 | 2 | |
Tree-based ortholog | 1-to-1 | VV06G00540 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | VV06G00540 | 1 | ||
Zea mays | Tree-based ortholog | 1-to-1 | ZM04G28440 | 1 | |
Anchor point | N/A | ZM04G28440 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ZM04G28440 | 1 |