Expansion plot
Gene family finder
Ks-graphs
Skyline plot
Synteny plot
WGDotplot
Functional clusters
WGMapping
BLAST
Workbench
Integrative Orthology Viewer:
AL8G19990
(Arabidopsis lyrata)
Inparalogs
| Organism | Source | Genes | #genes | Details |
|---|---|---|---|---|
| Arabidopsis lyrata | Orthologous gene family | AL8G19990 | 1 |  |
| Tree-based ortholog | AL8G19990 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | AL8G19990 | 1 |
Orthologs
| Organism | Source | Type | Genes | #genes | Details |
|---|---|---|---|---|---|
| Amborella trichopoda | Orthologous gene family | 1-to-1 | ATR_00098G00520 | 1 | |
| Tree-based ortholog | 1-to-1 | ATR_00098G00520 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ATR_00098G00520 | 1 | ||
| Arabidopsis thaliana | Orthologous gene family | 1-to-1 | AT5G54660 | 1 | |
| Tree-based ortholog | 1-to-1 | AT5G54660 | 1 | ||
| Anchor point | N/A | AT5G54660 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AT5G54660 | 1 | ||
| Beta vulgaris | Orthologous gene family | 1-to-1 | BV0G70030 | 1 | |
| Tree-based ortholog | 1-to-1 | BV0G70030 | 1 | ||
| Anchor point | N/A | BV0G70030 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BV0G70030 | 1 | ||
| Brassica rapa | Orthologous gene family | 1-to-many | BR02G14960 BR10G08230 | 2 | |
| Tree-based ortholog | 1-to-many | BR02G14960 BR10G08230 | 2 | ||
| Anchor point | N/A | BR10G08230 BR02G14960 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BR10G08230 | 1 | ||
| Capsella rubella | Orthologous gene family | 1-to-1 | CRU_008G14560 | 1 | |
| Tree-based ortholog | 1-to-1 | CRU_008G14560 | 1 | ||
| Anchor point | N/A | CRU_008G14560 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CRU_008G14560 | 1 | ||
| Carica papaya | Orthologous gene family | 1-to-1 | CP00097G00790 | 1 | |
| Tree-based ortholog | 1-to-1 | CP00097G00790 | 1 | ||
| Anchor point | N/A | CP00097G00790 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CP00097G00790 | 1 | ||
| Citrullus lanatus | Orthologous gene family | 1-to-1 | CL10G05400 | 1 | |
| Tree-based ortholog | 1-to-1 | CL10G05400 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CL10G05400 | 1 | ||
| Citrus sinensis | Orthologous gene family | 1-to-1 | CS00342G00090 | 1 | |
| Tree-based ortholog | 1-to-1 | CS00342G00090 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CS00342G00090 | 1 | ||
| Cucumis melo | Orthologous gene family | 1-to-1 | CM00078G00700 | 1 | |
| Tree-based ortholog | 1-to-1 | CM00078G00700 | 1 | ||
| Anchor point | N/A | CM00078G00700 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CM00078G00700 | 1 | ||
| Eucalyptus grandis | Orthologous gene family | 1-to-1 | EG0006G08000 | 1 | |
| Tree-based ortholog | 1-to-1 | EG0006G08000 | 1 | ||
| Anchor point | N/A | EG0006G08000 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | EG0006G08000 | 1 | ||
| Fragaria vesca | Orthologous gene family | 1-to-1 | FV3G23590 | 1 | |
| Tree-based ortholog | 1-to-1 | FV3G23590 | 1 | ||
| Anchor point | N/A | FV3G23590 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | FV3G23590 | 1 | ||
| Glycine max | Orthologous gene family | 1-to-many | GM12G34340 GM13G36220 | 2 | |
| Tree-based ortholog | 1-to-many | GM13G36220 GM12G34340 | 2 | ||
| Anchor point | N/A | GM12G34340 GM13G36220 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | GM12G34340 GM13G36220 | 2 | ||
| Gossypium raimondii | Orthologous gene family | 1-to-many | GR02G08160 GR13G16430 | 2 | |
| Tree-based ortholog | 1-to-many | GR13G16430 GR02G08160 | 2 | ||
| Anchor point | N/A | GR13G16430 GR02G08160 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | GR02G08160 | 1 | ||
| Lotus japonicus | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | LJ4G009690 | 1 | |
| Malus domestica | Orthologous gene family | 1-to-many | MD00G135160 MD00G135170 MD00G170980 ... | 4 | |
| Tree-based ortholog | 1-to-many | MD00G135170 MD00G170980 MD11G019880 ... | 4 | ||
| Anchor point | N/A | MD11G019880 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | MD00G135170 MD11G019880 MD00G170980 ... | 4 | ||
| Manihot esculenta | Orthologous gene family | 1-to-many | ME03241G00890 ME05206G00040 | 2 | |
| Tree-based ortholog | 1-to-many | ME05206G00040 ME03241G00890 | 2 | ||
| Anchor point | N/A | ME05206G00040 ME03241G00890 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | ME05206G00040 ME03241G00890 | 2 | ||
| Medicago truncatula | Orthologous gene family | 1-to-1 | MT2G082180 | 1 | |
| Tree-based ortholog | 1-to-1 | MT2G082180 | 1 | ||
| Anchor point | N/A | MT2G082180 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | MT2G082180 | 1 | ||
| Oryza sativa ssp. japonica | Orthologous gene family | 1-to-1 | OS05G42120 | 1 | |
| Tree-based ortholog | 1-to-1 | OS05G42120 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OS05G42120 | 1 | ||
| Physcomitrella patens | Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PP00105G00510 PP00008G01180 PP00008G01320 ... | 5 | |
| Populus trichocarpa | Orthologous gene family | 1-to-many | PT01G41620 PT11G13180 | 2 | |
| Tree-based ortholog | 1-to-many | PT01G41620 PT11G13180 | 2 | ||
| Anchor point | N/A | PT01G41620 PT11G13180 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PT01G41620 PT11G13180 | 2 | ||
| Prunus persica | Orthologous gene family | 1-to-1 | PPE_004G19290 | 1 | |
| Tree-based ortholog | 1-to-1 | PPE_004G19290 | 1 | ||
| Anchor point | N/A | PPE_004G19290 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PPE_004G19290 | 1 | ||
| Ricinus communis | Orthologous gene family | 1-to-1 | RC28166G00130 | 1 | |
| Tree-based ortholog | 1-to-1 | RC28166G00130 | 1 | ||
| Anchor point | N/A | RC28166G00130 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | RC28166G00130 | 1 | ||
| Solanum lycopersicum | Orthologous gene family | 1-to-1 | SL07G064020 | 1 | |
| Tree-based ortholog | 1-to-1 | SL07G064020 | 1 | ||
| Anchor point | N/A | SL07G064020 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | SL07G064020 | 1 | ||
| Solanum tuberosum | Orthologous gene family | 1-to-1 | ST07G026250 | 1 | |
| Tree-based ortholog | 1-to-1 | ST07G026250 | 1 | ||
| Anchor point | N/A | ST07G026250 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ST07G026250 | 1 | ||
| Thellungiella parvula | Orthologous gene family | 1-to-1 | TP6G16620 | 1 | |
| Tree-based ortholog | 1-to-1 | TP6G16620 | 1 | ||
| Anchor point | N/A | TP6G16620 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TP6G16620 | 1 | ||
| Theobroma cacao | Orthologous gene family | 1-to-1 | TC0007G05360 | 1 | |
| Tree-based ortholog | 1-to-1 | TC0007G05360 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TC0007G05360 | 1 | ||
| Vitis vinifera | Orthologous gene family | 1-to-1 | VV19G04860 | 1 | |
| Tree-based ortholog | 1-to-1 | VV19G04860 | 1 | ||
| Anchor point | N/A | VV19G04860 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | VV19G04860 | 1 | ||
| Zea mays | Orthologous gene family | 1-to-many | ZM06G27710 ZM08G18850 | 2 | |
| Tree-based ortholog | 1-to-many | ZM08G18850 ZM06G27710 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | ZM06G27710 ZM08G18850 | 2 |