Expansion plot
Gene family finder
Ks-graphs
Skyline plot
Synteny plot
WGDotplot
Functional clusters
WGMapping
BLAST
Workbench
Integrative Orthology Viewer:
AL8G18070
(Arabidopsis lyrata)
Inparalogs
| Organism | Source | Genes | #genes | Details |
|---|---|---|---|---|
| Arabidopsis lyrata | Orthologous gene family | AL8G18070 | 1 |  |
| Tree-based ortholog | AL8G18070 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | AL8G18070 | 1 |
Orthologs
| Organism | Source | Type | Genes | #genes | Details |
|---|---|---|---|---|---|
| Amborella trichopoda | Orthologous gene family | 1-to-1 | ATR_00017G01830 | 1 | |
| Tree-based ortholog | 1-to-1 | ATR_00017G01830 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ATR_00017G01830 | 1 | ||
| Arabidopsis thaliana | Orthologous gene family | 1-to-1 | AT5G53400 | 1 | |
| Tree-based ortholog | 1-to-1 | AT5G53400 | 1 | ||
| Anchor point | N/A | AT5G53400 AT4G27890 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AT5G53400 | 1 | ||
| Beta vulgaris | Orthologous gene family | 1-to-1 | BV3G02180 | 1 | |
| Tree-based ortholog | 1-to-1 | BV3G02180 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BV3G02180 | 1 | ||
| Brassica rapa | Orthologous gene family | 1-to-many | BR02G15780 BR03G13560 BR10G07300 | 3 | |
| Tree-based ortholog | 1-to-many | BR03G13560 BR02G15780 BR10G07300 | 3 | ||
| Anchor point | N/A | BR03G13560 BR02G15780 BR10G07300 | 3 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | BR03G13560 BR10G07300 | 2 | ||
| Capsella rubella | Orthologous gene family | 1-to-1 | CRU_008G13250 | 1 | |
| Tree-based ortholog | 1-to-1 | CRU_008G13250 | 1 | ||
| Anchor point | N/A | CRU_008G13250 CRU_007G12170 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CRU_008G13250 | 1 | ||
| Carica papaya | Orthologous gene family | 1-to-1 | CP00003G00820 | 1 | |
| Tree-based ortholog | 1-to-1 | CP00003G00820 | 1 | ||
| Anchor point | N/A | CP00003G00820 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CP00003G00820 | 1 | ||
| Chlamydomonas reinhardtii | Orthologous gene family | 1-to-1 | CR17G03470 | 1 | |
| Tree-based ortholog | 1-to-many | CR13G06440 CR07G04370 CR17G03470 | 3 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CR17G03470 | 1 | ||
| Citrullus lanatus | Orthologous gene family | 1-to-1 | CL01G00340 | 1 | |
| Tree-based ortholog | 1-to-1 | CL01G00340 | 1 | ||
| Anchor point | N/A | CL01G00340 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CL01G00340 | 1 | ||
| Citrus sinensis | Orthologous gene family | 1-to-1 | CS00951G00010 | 1 | |
| Tree-based ortholog | 1-to-1 | CS00951G00010 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CS00951G00010 | 1 | ||
| Cucumis melo | Orthologous gene family | 1-to-1 | CM00005G08690 | 1 | |
| Tree-based ortholog | 1-to-1 | CM00005G08690 | 1 | ||
| Anchor point | N/A | CM00005G08690 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CM00005G08690 | 1 | ||
| Eucalyptus grandis | Orthologous gene family | 1-to-1 | EG0001G11900 | 1 | |
| Tree-based ortholog | 1-to-1 | EG0001G11900 | 1 | ||
| Anchor point | N/A | EG0001G11900 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | EG0001G11900 | 1 | ||
| Fragaria vesca | Orthologous gene family | 1-to-1 | FV7G36270 | 1 | |
| Tree-based ortholog | 1-to-many | FV0G21360 FV1G19670 FV7G36270 | 3 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | FV7G36270 | 1 | ||
| Glycine max | Orthologous gene family | 1-to-many | GM04G41480 GM06G13360 | 2 | |
| Tree-based ortholog | 1-to-many | GM04G41480 GM06G13360 | 2 | ||
| Anchor point | N/A | GM04G41480 GM06G13360 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | GM04G41480 GM06G13360 | 2 | ||
| Gossypium raimondii | Orthologous gene family | 1-to-many | GR06G20120 GR08G26920 | 2 | |
| Tree-based ortholog | 1-to-many | GR08G26920 GR04G11170 GR06G20120 | 3 | ||
| Anchor point | N/A | GR08G26920 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | GR06G20120 | 1 | ||
| Lotus japonicus | Orthologous gene family | 1-to-1 | LJ1G013780 | 1 | |
| Tree-based ortholog | 1-to-1 | LJ1G013780 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | LJ1G013780 | 1 | ||
| Malus domestica | Orthologous gene family | 1-to-many | MD01G021880 MD07G019900 | 2 | |
| Tree-based ortholog | 1-to-many | MD00G080630 MD07G019900 MD01G021880 | 3 | ||
| Anchor point | N/A | MD07G019900 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | MD07G019900 | 1 | ||
| Manihot esculenta | Orthologous gene family | 1-to-many | ME04681G00770 ME06089G00010 | 2 | |
| Tree-based ortholog | 1-to-many | ME06089G00010 ME04681G00770 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | ME06089G00010 ME04681G00770 | 2 | ||
| Medicago truncatula | Orthologous gene family | 1-to-many | MT1G008170 MT1G008195 MT1G008200 | 3 | |
| Tree-based ortholog | 1-to-many | MT1G008170 MT1G008195 MT1G008200 | 3 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | MT1G008200 MT1G008170 MT1G008195 | 3 | ||
| Oryza sativa ssp. japonica | Orthologous gene family | 1-to-1 | OS06G12530 | 1 | |
| Tree-based ortholog | 1-to-many | OS02G51000 OS06G12530 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OS06G12530 | 1 | ||
| Ostreococcus lucimarinus | Orthologous gene family | 1-to-1 | OL09G03500 | 1 | |
| Tree-based ortholog | 1-to-many | OL11G02230 OL09G03500 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OL09G03500 | 1 | ||
| Physcomitrella patens | Orthologous gene family | 1-to-1 | PP00038G01090 | 1 | |
| Tree-based ortholog | 1-to-many | PP00060G00210 PP00022G01250 PP00011G01080 ... | 4 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PP00011G01080 PP00038G01090 | 2 | ||
| Populus trichocarpa | Orthologous gene family | 1-to-many | PT12G01410 PT15G01390 | 2 | |
| Tree-based ortholog | 1-to-many | PT15G01390 PT12G01410 | 2 | ||
| Anchor point | N/A | PT12G01410 PT15G01390 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PT12G01410 PT15G01390 | 2 | ||
| Prunus persica | Orthologous gene family | 1-to-1 | PPE_002G29780 | 1 | |
| Tree-based ortholog | 1-to-1 | PPE_002G29780 | 1 | ||
| Anchor point | N/A | PPE_002G29780 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PPE_002G29780 | 1 | ||
| Ricinus communis | Orthologous gene family | 1-to-1 | RC30169G02620 | 1 | |
| Tree-based ortholog | 1-to-1 | RC30169G02620 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | RC30169G02620 | 1 | ||
| Solanum lycopersicum | Orthologous gene family | 1-to-1 | SL03G083390 | 1 | |
| Tree-based ortholog | 1-to-many | SL02G062410 SL09G092200 SL06G051950 ... | 4 | ||
| Anchor point | N/A | SL03G083390 SL06G051950 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | SL03G083390 | 1 | ||
| Solanum tuberosum | Orthologous gene family | 1-to-1 | ST03G013350 | 1 | |
| Tree-based ortholog | 1-to-many | ST09G029190 ST09G029180 ST06G016120 ... | 4 | ||
| Anchor point | N/A | ST03G013350 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ST03G013350 | 1 | ||
| Thellungiella parvula | Orthologous gene family | 1-to-1 | TP6G15540 | 1 | |
| Tree-based ortholog | 1-to-1 | TP6G15540 | 1 | ||
| Anchor point | N/A | TP6G15540 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TP6G15540 | 1 | ||
| Theobroma cacao | Orthologous gene family | 1-to-1 | TC0003G19800 | 1 | |
| Tree-based ortholog | 1-to-1 | TC0003G19800 | 1 | ||
| Anchor point | N/A | TC0003G19800 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TC0003G19800 | 1 | ||
| Vitis vinifera | Orthologous gene family | 1-to-1 | VV16G10300 | 1 | |
| Tree-based ortholog | 1-to-1 | VV16G10300 | 1 | ||
| Anchor point | N/A | VV16G10300 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | VV16G10300 | 1 | ||
| Zea mays | Orthologous gene family | 1-to-many | ZM06G16670 ZM09G00700 | 2 | |
| Tree-based ortholog | 1-to-many | ZM09G00700 ZM06G16670 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | ZM09G00700 ZM06G16670 | 2 |