Expansion plot
Gene family finder
Ks-graphs
Skyline plot
Synteny plot
WGDotplot
Functional clusters
WGMapping
BLAST
Workbench
Integrative Orthology Viewer:
AL8G08730
(Arabidopsis lyrata)
Inparalogs
| Organism | Source | Genes | #genes | Details |
|---|---|---|---|---|
| Arabidopsis lyrata | Orthologous gene family | AL8G08730 | 1 |  |
| Tree-based ortholog | AL8G08730 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | AL8G08730 | 1 |
Orthologs
| Organism | Source | Type | Genes | #genes | Details |
|---|---|---|---|---|---|
| Amborella trichopoda | Orthologous gene family | 1-to-many | ATR_00006G01730 ATR_00185G00210 | 2 | |
| Tree-based ortholog | 1-to-1 | ATR_00185G00220 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ATR_00006G01730 | 1 | ||
| Arabidopsis thaliana | Orthologous gene family | 1-to-1 | AT5G42520 | 1 | |
| Tree-based ortholog | 1-to-1 | AT5G42520 | 1 | ||
| Anchor point | N/A | AT5G42520 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AT5G42520 | 1 | ||
| Beta vulgaris | Orthologous gene family | 1-to-1 | BV1G07050 | 1 | |
| Tree-based ortholog | 1-to-1 | BV1G07050 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BV1G07050 | 1 | ||
| Brassica rapa | Orthologous gene family | 1-to-many | BR04G01590 BR07G16460 | 2 | |
| Tree-based ortholog | 1-to-many | BR09G39850 BR04G01590 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BR04G01590 | 1 | ||
| Capsella rubella | Orthologous gene family | 1-to-1 | CRU_008G06390 | 1 | |
| Tree-based ortholog | 1-to-1 | CRU_008G06390 | 1 | ||
| Anchor point | N/A | CRU_008G06390 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CRU_008G06390 | 1 | ||
| Carica papaya | Tree-based ortholog | 1-to-1 | CP00150G00090 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CP00150G00090 | 1 | ||
| Citrullus lanatus | Orthologous gene family | 1-to-1 | CL08G14210 | 1 | |
| Tree-based ortholog | 1-to-1 | CL08G14210 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CL08G14210 | 1 | ||
| Citrus sinensis | Orthologous gene family | 1-to-1 | CS00002G05200 | 1 | |
| Tree-based ortholog | 1-to-1 | CS00002G05200 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CS00002G05200 | 1 | ||
| Cucumis melo | Orthologous gene family | 1-to-1 | CM00014G03580 | 1 | |
| Tree-based ortholog | 1-to-1 | CM00014G03580 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CM00014G03580 | 1 | ||
| Eucalyptus grandis | Orthologous gene family | 1-to-1 | EG0004G08420 | 1 | |
| Tree-based ortholog | 1-to-1 | EG0004G08420 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | EG0004G08420 | 1 | ||
| Fragaria vesca | Orthologous gene family | 1-to-1 | FV2G38950 | 1 | |
| Tree-based ortholog | 1-to-1 | FV2G38950 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | FV2G38950 | 1 | ||
| Glycine max | Orthologous gene family | 1-to-many | GM04G02860 GM06G02880 | 2 | |
| Tree-based ortholog | 1-to-many | GM06G02880 GM04G02860 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | GM04G02860 GM06G02880 | 2 | ||
| Gossypium raimondii | Orthologous gene family | 1-to-1 | GR02G12490 | 1 | |
| Tree-based ortholog | 1-to-1 | GR02G12490 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | GR02G12490 | 1 | ||
| Lotus japonicus | Orthologous gene family | 1-to-1 | LJ1G030220 | 1 | |
| Tree-based ortholog | 1-to-1 | LJ1G030220 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | LJ1G030220 | 1 | ||
| Malus domestica | Orthologous gene family | 1-to-many | MD08G001170 MD12G015010 | 2 | |
| Tree-based ortholog | 1-to-many | MD12G015010 MD08G001170 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | MD08G001170 MD12G015010 | 2 | ||
| Manihot esculenta | Orthologous gene family | 1-to-1 | ME07917G00030 | 1 | |
| Tree-based ortholog | 1-to-1 | ME07917G00030 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ME07917G00030 | 1 | ||
| Medicago truncatula | Orthologous gene family | 1-to-1 | MT1G023660 | 1 | |
| Tree-based ortholog | 1-to-1 | MT1G023660 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | MT1G023660 | 1 | ||
| Oryza sativa ssp. japonica | Orthologous gene family | 1-to-1 | OS06G04010 | 1 | |
| Tree-based ortholog | 1-to-1 | OS06G04010 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OS06G04010 | 1 | ||
| Physcomitrella patens | Tree-based ortholog | 1-to-1 | PP00056G00020 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PP00056G00020 | 1 | ||
| Populus trichocarpa | Orthologous gene family | 1-to-many | PT02G02670 PT05G23590 | 2 | |
| Tree-based ortholog | 1-to-many | PT02G02670 PT05G23590 | 2 | ||
| Anchor point | N/A | PT02G02670 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PT05G23590 PT02G02670 | 2 | ||
| Prunus persica | Orthologous gene family | 1-to-1 | PPE_001G37770 | 1 | |
| Tree-based ortholog | 1-to-1 | PPE_001G37770 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PPE_001G37770 | 1 | ||
| Ricinus communis | Orthologous gene family | 1-to-1 | RC30170G05000 | 1 | |
| Tree-based ortholog | 1-to-1 | RC30170G05000 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | RC30170G05000 | 1 | ||
| Solanum lycopersicum | Orthologous gene family | 1-to-1 | SL04G081170 | 1 | |
| Tree-based ortholog | 1-to-1 | SL04G081170 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | SL04G081170 | 1 | ||
| Solanum tuberosum | Orthologous gene family | 1-to-1 | ST04G034550 | 1 | |
| Tree-based ortholog | 1-to-1 | ST04G034550 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ST04G034550 | 1 | ||
| Thellungiella parvula | Orthologous gene family | 1-to-1 | TP5G02970 | 1 | |
| Tree-based ortholog | 1-to-1 | TP5G02970 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TP5G02970 | 1 | ||
| Theobroma cacao | Orthologous gene family | 1-to-1 | TC0008G03750 | 1 | |
| Tree-based ortholog | 1-to-1 | TC0008G03750 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TC0008G03750 | 1 | ||
| Vitis vinifera | Orthologous gene family | 1-to-1 | VV18G10080 | 1 | |
| Tree-based ortholog | 1-to-1 | VV03G05790 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | VV18G10080 | 1 | ||
| Zea mays | Orthologous gene family | 1-to-1 | ZM09G05720 | 1 | |
| Tree-based ortholog | 1-to-1 | ZM09G05720 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ZM09G05720 | 1 |