Integrative Orthology Viewer: AL8G06770 (Arabidopsis lyrata)
Inparalogs
Organism | Source | Genes | #genes | Details |
---|---|---|---|---|
Arabidopsis lyrata | Orthologous gene family | AL0G02590 AL0G11640 AL1G22060 ... | 11 | |
Tree-based ortholog | AL8G06770 | 1 | ||
Anchor point | AL1G03710 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | AL0G02590 AL8G06770 | 2 |
Orthologs
Organism | Source | Type | Genes | #genes | Details |
---|---|---|---|---|---|
Amborella trichopoda | Orthologous gene family | many-to-many | ATR_00009G00720 ATR_00077G01280 ATR_00097G00440 | 3 | |
Tree-based ortholog | 1-to-1 | ATR_00009G00730 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | ATR_00009G00720 | 1 | ||
Arabidopsis thaliana | Orthologous gene family | many-to-many | AT1G20860 AT1G76430 AT2G32830 ... | 9 | |
Tree-based ortholog | 1-to-many | AT3G54700 AT2G38940 | 2 | ||
Anchor point | 1-to-1 | AT5G43340 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-many | AT5G43350 AT5G43360 AT5G43370 | 3 | ||
Beta vulgaris | Orthologous gene family | many-to-many | BV3G09510 BV3G09520 BV3G09530 ... | 9 | |
Tree-based ortholog | 1-to-1 | BV5G13720 | 1 | ||
Anchor point | 1-to-1 | BV3G09510 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | BV5G13720 | 1 | ||
Brassica rapa | Orthologous gene family | many-to-many | BR00G06810 BR00G06820 BR00G06830 ... | 28 | |
Tree-based ortholog | 1-to-1 | BR09G20190 | 1 | ||
Anchor point | 1-to-many | BR06G38710 BR09G20190 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-many | BR06G38720 BR00G06830 BR09G20240 ... | 4 | ||
Capsella rubella | Orthologous gene family | many-to-many | CRU_001G19490 CRU_002G22030 CRU_004G13810 ... | 11 | |
Tree-based ortholog | 1-to-many | CRU_005G20050 CRU_004G20280 | 2 | ||
Anchor point | 1-to-1 | CRU_008G05130 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-many | CRU_008G05150 CRU_008G05140 | 2 | ||
Carica papaya | Orthologous gene family | many-to-many | CP00003G00460 CP00026G00180 CP00050G00250 ... | 4 | |
Tree-based ortholog | 1-to-many | CP39890G00010 CP00050G00250 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CP00044G00640 | 1 | ||
Chlamydomonas reinhardtii | Orthologous gene family | many-to-many | CR02G00480 CR16G07840 CR16G07850 ... | 4 | |
Tree-based ortholog | 1-to-many | CR16G07850 CR16G07870 CR16G07840 ... | 4 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-many | CR16G07870 CR02G00480 CR16G07840 ... | 4 | ||
Citrullus lanatus | Orthologous gene family | many-to-many | CL05G04660 CL05G04670 CL05G09860 ... | 8 | |
Tree-based ortholog | 1-to-many | CL07G02020 CL07G01810 | 2 | ||
Anchor point | 1-to-1 | CL06G06770 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-many | CL07G01810 CL07G02020 | 2 | ||
Citrus sinensis | Orthologous gene family | many-to-many | CS00002G07080 CS00024G00230 CS00024G00240 ... | 7 | |
Tree-based ortholog | 1-to-1 | CS00060G00910 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CS00088G00370 | 1 | ||
Cucumis melo | Orthologous gene family | many-to-many | CM00006G05280 CM00006G05290 CM00006G11020 ... | 7 | |
Tree-based ortholog | 1-to-1 | CM00018G00840 | 1 | ||
Anchor point | 1-to-1 | CM00057G00260 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CM00006G05290 | 1 | ||
Eucalyptus grandis | Orthologous gene family | many-to-many | EG0001G22560 EG0002G12850 EG0006G14770 ... | 17 | |
Tree-based ortholog | 1-to-many | EG0011G27520 EG0002G12850 | 2 | ||
Anchor point | 1-to-1 | EG0008G24770 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | EG0002G12850 | 1 | ||
Fragaria vesca | Orthologous gene family | many-to-many | FV2G09090 FV2G28980 FV4G00300 ... | 8 | |
Tree-based ortholog | 1-to-many | FV2G09090 FV2G09080 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | FV4G00300 | 1 | ||
Glycine max | Orthologous gene family | many-to-many | GM02G00840 GM03G31950 GM07G34870 ... | 14 | |
Tree-based ortholog | 1-to-many | GM03G31950 GM19G34710 GM10G04230 | 3 | ||
Anchor point | 1-to-1 | GM10G00950 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-many | GM02G00840 GM10G00950 | 2 | ||
Gossypium raimondii | Orthologous gene family | many-to-many | GR00G01450 GR00G01460 GR01G20590 ... | 11 | |
Tree-based ortholog | 1-to-many | GR01G25320 GR07G14600 | 2 | ||
Anchor point | 1-to-many | GR06G07210 GR05G04990 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | GR01G25320 | 1 | ||
Lotus japonicus | Orthologous gene family | many-to-many | LJ1G012940 LJ1G061610 LJ5G021360 ... | 7 | |
Tree-based ortholog | 1-to-1 | LJ1G061610 | 1 | ||
Anchor point | 1-to-1 | LJ6G000340 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-many | LJ5G021360 LJ6G000340 | 2 | ||
Malus domestica | Orthologous gene family | many-to-many | MD00G054540 MD00G168210 MD00G255240 ... | 19 | |
Tree-based ortholog | 1-to-1 | MD00G354600 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | MD07G003210 | 1 | ||
Manihot esculenta | Orthologous gene family | many-to-many | ME01551G01010 ME02943G01240 ME03454G00070 ... | 6 | |
Tree-based ortholog | 1-to-many | ME09880G00240 ME06715G00090 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-many | ME06715G00090 ME09880G00240 | 2 | ||
Medicago truncatula | Orthologous gene family | many-to-many | MT1G028600 MT1G069930 MT4G083960 ... | 4 | |
Tree-based ortholog | 1-to-many | MT1G069935 MT1G069930 MT7G096870 ... | 4 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | MT1G074930 | 1 | ||
Oryza sativa ssp. japonica | Orthologous gene family | many-to-many | OS01G46860 OS03G04360 OS03G05610 ... | 12 | |
Tree-based ortholog | 1-to-many | OS02G39750 OS10G20500 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | OS08G45000 | 1 | ||
Physcomitrella patens | Orthologous gene family | many-to-many | PP00032G00410 PP00053G00190 PP00076G00440 ... | 6 | |
Tree-based ortholog | 1-to-many | PP00076G00440 PP00302G00320 PP00426G00040 ... | 6 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-many | PP00302G00320 PP00076G00440 PP00032G00410 ... | 4 | ||
Populus trichocarpa | Orthologous gene family | many-to-many | PT01G31850 PT02G00550 PT02G03890 ... | 14 | |
Tree-based ortholog | 1-to-1 | PT05G22370 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-many | PT05G22350 PT05G22360 | 2 | ||
Prunus persica | Orthologous gene family | many-to-many | PPE_001G03780 PPE_001G03790 PPE_001G50620 ... | 10 | |
Tree-based ortholog | 1-to-many | PPE_008G23830 PPE_008G23840 | 2 | ||
Anchor point | 1-to-1 | PPE_001G03780 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | PPE_008G23840 | 1 | ||
Ricinus communis | Orthologous gene family | many-to-many | RC29729G01230 RC29895G00070 RC29908G00430 ... | 5 | |
Tree-based ortholog | 1-to-1 | RC30005G00710 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | RC29895G00080 | 1 | ||
Solanum lycopersicum | Orthologous gene family | many-to-many | SL03G005530 SL03G005560 SL06G034200 ... | 7 | |
Tree-based ortholog | 1-to-many | SL09G073010 SL06G034200 SL09G066410 | 3 | ||
Anchor point | 1-to-many | SL09G090070 SL03G005530 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | SL09G090080 | 1 | ||
Solanum tuberosum | Orthologous gene family | many-to-many | ST04G036210 ST06G016200 ST06G016210 ... | 7 | |
Tree-based ortholog | 1-to-many | ST09G021550 ST09G021430 ST09G019430 ... | 5 | ||
Anchor point | 1-to-many | ST03G005760 ST09G025870 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | ST09G025870 | 1 | ||
Thellungiella parvula | Orthologous gene family | many-to-many | TP1G18560 TP4G21310 TP5G07750 ... | 4 | |
Tree-based ortholog | 1-to-many | TP5G07750 TP4G21310 | 2 | ||
Anchor point | 1-to-1 | TP2G08170 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | TP5G07750 | 1 | ||
Theobroma cacao | Orthologous gene family | many-to-many | TC0003G19280 TC0004G20280 TC0004G25690 ... | 7 | |
Tree-based ortholog | 1-to-1 | TC0001G25720 | 1 | ||
Anchor point | 1-to-1 | TC0004G25690 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | TC0001G25720 | 1 | ||
Vitis vinifera | Orthologous gene family | many-to-many | VV05G08160 VV07G10860 VV13G09020 ... | 5 | |
Tree-based ortholog | 1-to-many | VV05G08170 VV07G10860 | 2 | ||
Anchor point | 1-to-many | VV05G08150 VV07G10860 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | VV07G10860 | 1 | ||
Zea mays | Orthologous gene family | many-to-many | ZM01G02670 ZM01G03810 ZM01G35830 ... | 13 | |
Tree-based ortholog | 1-to-1 | ZM08G12300 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-many | ZM05G10740 ZM01G43560 | 2 |