Integrative Orthology Viewer: AL8G06550 (Arabidopsis lyrata)
Inparalogs
Organism | Source | Genes | #genes | Details |
---|---|---|---|---|
Arabidopsis lyrata | Orthologous gene family | AL6G22380 AL8G06550 | 2 | |
Tree-based ortholog | AL8G06550 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | AL8G06550 | 1 |
Orthologs
Organism | Source | Type | Genes | #genes | Details |
---|---|---|---|---|---|
Amborella trichopoda | Orthologous gene family | many-to-many | ATR_00009G01090 ATR_00040G02650 | 2 | |
Tree-based ortholog | 1-to-1 | ATR_00009G01090 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ATR_00009G01090 | 1 | ||
Arabidopsis thaliana | Orthologous gene family | many-to-many | AT5G22750 AT5G43530 | 2 | |
Tree-based ortholog | 1-to-1 | AT5G43530 | 1 | ||
Anchor point | N/A | AT5G43530 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AT5G43530 | 1 | ||
Beta vulgaris | Orthologous gene family | many-to-1 | BV9G08390 | 1 | |
Tree-based ortholog | 1-to-1 | BV9G08390 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BV9G08390 | 1 | ||
Brassica rapa | Orthologous gene family | many-to-many | BR03G09700 BR06G38650 | 2 | |
Tree-based ortholog | 1-to-1 | BR06G38650 | 1 | ||
Anchor point | N/A | BR06G38650 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BR06G38650 | 1 | ||
Capsella rubella | Orthologous gene family | many-to-many | CRU_006G19860 CRU_008G05000 | 2 | |
Tree-based ortholog | 1-to-1 | CRU_008G05000 | 1 | ||
Anchor point | N/A | CRU_008G05000 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CRU_008G05000 | 1 | ||
Carica papaya | Orthologous gene family | many-to-many | CP00044G00830 CP00047G00560 | 2 | |
Tree-based ortholog | 1-to-1 | CP00044G00830 | 1 | ||
Anchor point | N/A | CP00044G00830 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CP00044G00830 | 1 | ||
Chlamydomonas reinhardtii | Tree-based ortholog | 1-to-many | CR11G04370 CR03G15730 CR10G08250 ... | 5 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CR14G01450 | 1 | ||
Citrullus lanatus | Orthologous gene family | many-to-1 | CL05G04910 | 1 | |
Tree-based ortholog | 1-to-1 | CL05G04910 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CL05G04910 | 1 | ||
Citrus sinensis | Orthologous gene family | many-to-1 | CS00371G00070 | 1 | |
Tree-based ortholog | 1-to-1 | CS00371G00070 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CS00371G00070 | 1 | ||
Cucumis melo | Tree-based ortholog | 1-to-many | CM00006G05480 CM00006G05490 | 2 | |
Anchor point | N/A | CM00006G05480 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CM00004G01440 | 1 | ||
Eucalyptus grandis | Orthologous gene family | many-to-many | EG0008G25440 EG0010G03670 | 2 | |
Tree-based ortholog | 1-to-1 | EG0008G25440 | 1 | ||
Anchor point | N/A | EG0008G25440 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | EG0008G25440 | 1 | ||
Fragaria vesca | Orthologous gene family | many-to-1 | FV4G07000 | 1 | |
Tree-based ortholog | 1-to-many | FV4G07040 FV4G07000 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | FV4G07040 | 1 | ||
Glycine max | Orthologous gene family | many-to-many | GM10G01091 GM17G05390 GM20G21940 | 3 | |
Tree-based ortholog | 1-to-many | GM10G01091 GM20G21940 | 2 | ||
Anchor point | N/A | GM10G01091 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | GM20G21940 | 1 | ||
Gossypium raimondii | Orthologous gene family | many-to-many | GR06G24880 GR13G25860 | 2 | |
Tree-based ortholog | 1-to-1 | GR06G24880 | 1 | ||
Anchor point | N/A | GR06G24880 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | GR06G24880 | 1 | ||
Lotus japonicus | Tree-based ortholog | 1-to-many | LJ3G041890 LJ1G057100 LJ1G057190 | 3 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | LJ4G008460 | 1 | ||
Malus domestica | Best-Hits-and-Inparalogs(BHI)family | 1-to-many | MD00G213100 MD00G174670 | 2 | |
Manihot esculenta | Orthologous gene family | many-to-1 | ME01551G01210 | 1 | |
Tree-based ortholog | 1-to-1 | ME01551G01210 | 1 | ||
Anchor point | N/A | ME01551G01210 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ME01551G01210 | 1 | ||
Medicago truncatula | Orthologous gene family | many-to-many | MT1G044120 MT2G084630 | 2 | |
Tree-based ortholog | 1-to-1 | MT1G044120 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | MT1G044120 | 1 | ||
Oryza sativa ssp. japonica | Orthologous gene family | many-to-many | OS02G32570 OS04G09800 | 2 | |
Tree-based ortholog | 1-to-1 | OS04G09800 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OS04G09800 | 1 | ||
Ostreococcus lucimarinus | Tree-based ortholog | 1-to-many | OL13G02650 OL21G00350 | 2 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | OL21G00350 OL13G02650 | 2 | ||
Physcomitrella patens | Tree-based ortholog | 1-to-1 | PP00041G00810 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PP00041G00810 | 1 | ||
Populus trichocarpa | Orthologous gene family | many-to-many | PT03G08340 PT04G18940 PT10G07380 | 3 | |
Tree-based ortholog | 1-to-1 | PT03G08340 | 1 | ||
Anchor point | N/A | PT10G07380 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PT03G08340 | 1 | ||
Prunus persica | Orthologous gene family | many-to-many | PPE_001G03360 PPE_003G27730 | 2 | |
Tree-based ortholog | 1-to-1 | PPE_001G03360 | 1 | ||
Anchor point | N/A | PPE_001G03360 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PPE_001G03360 | 1 | ||
Ricinus communis | Orthologous gene family | many-to-1 | RC29603G00210 | 1 | |
Tree-based ortholog | 1-to-1 | RC29603G00210 | 1 | ||
Anchor point | N/A | RC29603G00210 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | RC29603G00210 | 1 | ||
Solanum lycopersicum | Orthologous gene family | many-to-many | SL03G005460 SL11G066790 | 2 | |
Tree-based ortholog | 1-to-1 | SL03G005460 | 1 | ||
Anchor point | N/A | SL03G005460 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | SL03G005460 | 1 | ||
Solanum tuberosum | Orthologous gene family | many-to-many | ST03G005660 ST11G024610 | 2 | |
Tree-based ortholog | 1-to-1 | ST03G005660 | 1 | ||
Anchor point | N/A | ST03G005660 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ST03G005660 | 1 | ||
Thellungiella parvula | Orthologous gene family | many-to-1 | TP6G22670 | 1 | |
Tree-based ortholog | 1-to-1 | TP6G22670 | 1 | ||
Anchor point | N/A | TP2G08360 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TP6G22670 | 1 | ||
Theobroma cacao | Orthologous gene family | many-to-many | TC0004G25280 TC0009G28810 | 2 | |
Tree-based ortholog | 1-to-1 | TC0004G25280 | 1 | ||
Anchor point | N/A | TC0004G25280 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TC0004G25280 | 1 | ||
Vitis vinifera | Orthologous gene family | many-to-1 | VV05G07630 | 1 | |
Tree-based ortholog | 1-to-1 | VV05G07630 | 1 | ||
Anchor point | N/A | VV05G07630 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | VV05G07630 | 1 | ||
Zea mays | Orthologous gene family | many-to-many | ZM04G11430 ZM04G15680 | 2 | |
Tree-based ortholog | 1-to-1 | ZM04G11430 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ZM04G11430 | 1 |