Integrative Orthology Viewer: AL7G38540 (Arabidopsis lyrata)
Inparalogs
Organism | Source | Genes | #genes | Details |
---|---|---|---|---|
Arabidopsis lyrata | Orthologous gene family | AL7G38540 | 1 | |
Tree-based ortholog | AL7G38540 | 1 | ||
Anchor point | AL5G08360 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | AL7G38540 | 1 |
Orthologs
Organism | Source | Type | Genes | #genes | Details |
---|---|---|---|---|---|
Amborella trichopoda | Tree-based ortholog | 1-to-1 | ATR_00010G04510 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ATR_00010G04510 | 1 | ||
Arabidopsis thaliana | Orthologous gene family | 1-to-1 | AT5G39760 | 1 | |
Tree-based ortholog | 1-to-1 | AT5G39760 | 1 | ||
Anchor point | 1-to-1 | AT5G39760 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AT5G39760 | 1 | ||
Beta vulgaris | Tree-based ortholog | 1-to-1 | BV0G24260 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BV0G24260 | 1 | ||
Brassica rapa | Orthologous gene family | 1-to-1 | BR04G09150 | 1 | |
Tree-based ortholog | 1-to-1 | BR04G09150 | 1 | ||
Anchor point | 1-to-many | BR06G32010 BR04G09150 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BR04G09150 | 1 | ||
Capsella rubella | Orthologous gene family | 1-to-1 | CRU_007G34690 | 1 | |
Tree-based ortholog | 1-to-1 | CRU_007G34690 | 1 | ||
Anchor point | 1-to-1 | CRU_007G34690 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CRU_007G34690 | 1 | ||
Carica papaya | Tree-based ortholog | 1-to-1 | CP00140G00530 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CP00140G00530 | 1 | ||
Citrullus lanatus | Tree-based ortholog | 1-to-1 | CL10G13140 | 1 | |
Anchor point | 1-to-1 | CL10G13140 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CL09G18710 | 1 | ||
Citrus sinensis | Tree-based ortholog | 1-to-1 | CS00003G04300 | 1 | |
Anchor point | 1-to-1 | CS00015G01670 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CS00015G01680 | 1 | ||
Cucumis melo | Tree-based ortholog | 1-to-1 | CM00011G08200 | 1 | |
Anchor point | 1-to-many | CM00011G08200 CM00051G00280 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CM00011G08200 | 1 | ||
Eucalyptus grandis | Tree-based ortholog | 1-to-many | EG0007G00510 EG0009G00200 | 2 | |
Anchor point | 1-to-many | EG0009G16300 EG0010G11820 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | EG0006G03490 | 1 | ||
Fragaria vesca | Tree-based ortholog | 1-to-1 | FV6G44540 | 1 | |
Anchor point | 1-to-1 | FV0G05550 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | FV6G44540 | 1 | ||
Glycine max | Tree-based ortholog | 1-to-many | GM18G49390 GM09G37300 GM13G05420 | 3 | |
Anchor point | 1-to-many | GM06G20810 GM18G49177 GM07G35760 ... | 5 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | GM13G05420 | 1 | ||
Gossypium raimondii | Tree-based ortholog | 1-to-many | GR12G05430 GR06G01720 | 2 | |
Anchor point | 1-to-many | GR12G05430 GR06G01720 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | GR06G01720 | 1 | ||
Lotus japonicus | Tree-based ortholog | 1-to-1 | LJ2G017160 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | LJ2G017160 | 1 | ||
Malus domestica | Tree-based ortholog | 1-to-1 | MD09G003660 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | MD13G004730 MD00G335690 MD16G003850 ... | 4 | ||
Manihot esculenta | Tree-based ortholog | 1-to-many | ME11495G00260 ME03834G00050 | 2 | |
Anchor point | 1-to-many | ME11581G01500 ME12794G02160 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ME11341G00720 | 1 | ||
Medicago truncatula | Tree-based ortholog | 1-to-1 | MT7G010300 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | MT7G010300 | 1 | ||
Oryza sativa ssp. japonica | Tree-based ortholog | 1-to-1 | OS06G23030 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | OS08G37400 OS09G29130 | 2 | ||
Physcomitrella patens | Tree-based ortholog | 1-to-many | PP00230G00360 PP00165G00520 PP00153G00520 ... | 7 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PP00165G00520 PP00003G02180 PP00235G00550 ... | 6 | ||
Populus trichocarpa | Tree-based ortholog | 1-to-many | PT08G08600 PT10G16940 | 2 | |
Anchor point | 1-to-1 | PT17G08270 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PT04G12650 PT17G08290 | 2 | ||
Prunus persica | Tree-based ortholog | 1-to-1 | PPE_003G24670 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PPE_001G28600 | 1 | ||
Ricinus communis | Tree-based ortholog | 1-to-1 | RC29813G00370 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | RC27895G00010 | 1 | ||
Solanum lycopersicum | Tree-based ortholog | 1-to-many | SL02G067320 SL02G067310 | 2 | |
Anchor point | 1-to-many | SL02G067310 SL02G087970 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | SL02G067320 | 1 | ||
Solanum tuberosum | Tree-based ortholog | 1-to-many | ST02G013180 ST02G013170 | 2 | |
Anchor point | 1-to-many | ST02G034890 ST02G013170 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | ST02G013170 ST02G013180 | 2 | ||
Thellungiella parvula | Orthologous gene family | 1-to-1 | TP7G02270 | 1 | |
Tree-based ortholog | 1-to-1 | TP7G02270 | 1 | ||
Anchor point | 1-to-many | TP7G02270 TP2G17540 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TP7G02270 | 1 | ||
Theobroma cacao | Tree-based ortholog | 1-to-1 | TC0004G08590 | 1 | |
Anchor point | 1-to-1 | TC0004G08560 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TC0004G08590 | 1 | ||
Vitis vinifera | Tree-based ortholog | 1-to-1 | VV14G02170 | 1 | |
Anchor point | 1-to-1 | VV14G02170 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | VV14G02170 | 1 | ||
Zea mays | Tree-based ortholog | 1-to-many | ZM01G38100 ZM04G14390 ZM02G30620 ... | 4 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ZM03G18600 | 1 |