Integrative Orthology Viewer: AL7G35520 (Arabidopsis lyrata)
Inparalogs
Organism | Source | Genes | #genes | Details |
---|---|---|---|---|
Arabidopsis lyrata | Orthologous gene family | AL2G00260 AL7G35520 | 2 | |
Tree-based ortholog | AL7G35520 AL2G00260 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | AL7G35520 | 1 |
Orthologs
Organism | Source | Type | Genes | #genes | Details |
---|---|---|---|---|---|
Amborella trichopoda | Orthologous gene family | many-to-1 | ATR_00002G00540 | 1 | |
Tree-based ortholog | many-to-1 | ATR_00009G03600 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ATR_00009G03600 | 1 | ||
Arabidopsis thaliana | Orthologous gene family | many-to-many | AT5G28540 AT5G42020 | 2 | |
Tree-based ortholog | many-to-many | AT5G02490 AT5G42020 AT5G28540 | 3 | ||
Anchor point | N/A | AT5G42020 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AT5G42020 | 1 | ||
Beta vulgaris | Orthologous gene family | many-to-1 | BV4G09310 | 1 | |
Tree-based ortholog | many-to-many | BV2G07680 BV3G01690 BV4G09310 ... | 7 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BV3G01690 | 1 | ||
Brassica rapa | Orthologous gene family | many-to-many | BR02G01360 BR03G15520 BR07G04140 | 3 | |
Tree-based ortholog | many-to-many | BR02G01360 BR07G04140 BR03G18420 ... | 6 | ||
Anchor point | N/A | BR10G13220 BR02G01360 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | BR07G04140 BR03G15520 | 2 | ||
Capsella rubella | Tree-based ortholog | many-to-many | CRU_007G31930 CRU_003G08170 CRU_001G15140 | 3 | |
Anchor point | N/A | CRU_007G31920 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CRU_007G31930 | 1 | ||
Carica papaya | Orthologous gene family | many-to-1 | CP00015G00100 | 1 | |
Tree-based ortholog | many-to-many | CP34651G00020 CP00015G00100 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CP00015G00100 | 1 | ||
Chlamydomonas reinhardtii | Orthologous gene family | many-to-many | CR02G01770 CR02G01790 | 2 | |
Tree-based ortholog | many-to-1 | CR09G03290 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | CR02G01770 CR02G01790 | 2 | ||
Citrullus lanatus | Orthologous gene family | many-to-1 | CL01G01670 | 1 | |
Tree-based ortholog | many-to-1 | CL01G01670 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CL01G01670 | 1 | ||
Citrus sinensis | Orthologous gene family | many-to-many | CS00009G02630 CS00103G00220 | 2 | |
Tree-based ortholog | many-to-many | CS00009G02630 CS00024G00550 | 2 | ||
Anchor point | N/A | CS00009G02630 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CS00009G02630 | 1 | ||
Cucumis melo | Orthologous gene family | many-to-1 | CM00005G07350 | 1 | |
Tree-based ortholog | many-to-1 | CM00005G07350 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CM00005G07350 | 1 | ||
Eucalyptus grandis | Tree-based ortholog | many-to-many | EG0362G00010 EG0008G36600 EG0005G08580 | 3 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | EG0005G08580 | 1 | ||
Fragaria vesca | Tree-based ortholog | many-to-many | FV1G07610 FV7G26580 FV7G26480 ... | 12 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | FV1G01930 | 1 | ||
Glycine max | Orthologous gene family | many-to-many | GM05G36600 GM05G36620 GM08G02940 | 3 | |
Tree-based ortholog | many-to-many | GM05G36600 GM13G29580 GM03G32850 ... | 13 | ||
Anchor point | N/A | GM08G02940 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | GM08G02940 GM05G36620 | 2 | ||
Gossypium raimondii | Orthologous gene family | many-to-many | GR03G07460 GR07G02030 GR07G02060 ... | 4 | |
Tree-based ortholog | many-to-many | GR03G07460 GR07G02030 GR04G13140 ... | 4 | ||
Anchor point | N/A | GR04G13140 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | GR03G07460 | 1 | ||
Lotus japonicus | Tree-based ortholog | many-to-1 | LJ1G025730 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | LJ3G030160 | 1 | ||
Malus domestica | Tree-based ortholog | many-to-many | MD00G180640 MD00G454720 MD00G335990 | 3 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | MD00G009230 | 1 | ||
Manihot esculenta | Orthologous gene family | many-to-many | ME04274G00300 ME11994G00040 | 2 | |
Tree-based ortholog | many-to-many | ME04274G00300 ME11994G00040 | 2 | ||
Anchor point | N/A | ME04274G00300 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ME04274G00300 | 1 | ||
Medicago truncatula | Tree-based ortholog | many-to-many | MT8G099945 MT4G130540 MT7G021430 ... | 7 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | MT8G099795 | 1 | ||
Oryza sativa ssp. japonica | Orthologous gene family | many-to-1 | OS02G02410 | 1 | |
Tree-based ortholog | many-to-many | OS08G09770 OS03G50250 OS11G08445 ... | 9 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OS02G02410 | 1 | ||
Ostreococcus lucimarinus | Orthologous gene family | many-to-1 | OL02G03650 | 1 | |
Tree-based ortholog | many-to-many | OL06G00760 OL02G03650 OL16G02240 ... | 4 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OL02G03650 | 1 | ||
Physcomitrella patens | Orthologous gene family | many-to-1 | PP00181G00010 | 1 | |
Tree-based ortholog | many-to-many | PP00181G00010 PP00298G00110 PP00091G00570 ... | 4 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PP00181G00010 PP00288G00120 | 2 | ||
Populus trichocarpa | Orthologous gene family | many-to-many | PT01G08750 PT03G14360 | 2 | |
Tree-based ortholog | many-to-many | PT12G01760 PT10G20580 PT01G08750 ... | 5 | ||
Anchor point | N/A | PT03G14360 PT01G08750 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PT03G14360 | 1 | ||
Prunus persica | Orthologous gene family | many-to-many | PPE_005G13440 PPE_006G32720 | 2 | |
Tree-based ortholog | many-to-many | PPE_002G22510 PPE_007G13100 PPE_006G07820 ... | 5 | ||
Anchor point | N/A | PPE_005G13440 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PPE_005G13440 | 1 | ||
Ricinus communis | Orthologous gene family | many-to-1 | RC30068G00210 | 1 | |
Tree-based ortholog | many-to-1 | RC30068G00210 | 1 | ||
Anchor point | N/A | RC30068G00210 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | RC30068G00210 | 1 | ||
Solanum lycopersicum | Orthologous gene family | many-to-many | SL03G082920 SL08G082820 | 2 | |
Tree-based ortholog | many-to-many | SL06G052050 SL06G076020 SL03G082920 ... | 4 | ||
Anchor point | N/A | SL08G082820 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | SL08G082820 | 1 | ||
Solanum tuberosum | Orthologous gene family | many-to-many | ST03G012990 ST08G027450 | 2 | |
Tree-based ortholog | many-to-many | ST08G027450 ST06G031900 ST03G012990 ... | 4 | ||
Anchor point | N/A | ST03G012990 ST08G027450 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ST03G012990 | 1 | ||
Thellungiella parvula | Orthologous gene family | many-to-many | TP2G00210 TP7G00100 | 2 | |
Tree-based ortholog | many-to-many | TP2G00210 TP7G00100 | 2 | ||
Anchor point | N/A | TP7G00100 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TP7G00100 | 1 | ||
Theobroma cacao | Orthologous gene family | many-to-many | TC0003G29800 TC0005G30950 | 2 | |
Tree-based ortholog | many-to-many | TC0009G31880 TC0003G29800 | 2 | ||
Anchor point | N/A | TC0003G29800 TC0003G20210 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TC0003G29800 | 1 | ||
Vitis vinifera | Tree-based ortholog | many-to-many | VV07G13140 VV16G09270 VV02G05230 | 3 | |
Anchor point | N/A | VV02G05230 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | VV16G09270 | 1 | ||
Zea mays | Orthologous gene family | many-to-many | ZM04G41380 ZM05G17320 | 2 | |
Tree-based ortholog | many-to-many | ZM05G17320 ZM07G02420 ZM05G12480 ... | 5 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | ZM04G41380 ZM05G17320 | 2 |