Integrative Orthology Viewer: AL7G34640 (Arabidopsis lyrata)
Inparalogs
Organism | Source | Genes | #genes | Details |
---|---|---|---|---|
Arabidopsis lyrata | Orthologous gene family | AL1G42130 AL2G13170 AL3G19270 ... | 6 | |
Tree-based ortholog | AL7G34640 | 1 | ||
Anchor point | AL2G13170 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | AL7G34640 | 1 |
Orthologs
Organism | Source | Type | Genes | #genes | Details |
---|---|---|---|---|---|
Amborella trichopoda | Orthologous gene family | many-to-many | ATR_00006G01140 ATR_00025G01100 ATR_00060G00520 ... | 4 | |
Tree-based ortholog | 1-to-many | ATR_00006G01140 ATR_00060G00520 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ATR_00006G01140 | 1 | ||
Arabidopsis thaliana | Orthologous gene family | many-to-many | AT1G48470 AT1G66200 AT3G17820 ... | 6 | |
Tree-based ortholog | 1-to-1 | AT5G37600 | 1 | ||
Anchor point | 1-to-many | AT5G37600 AT1G66200 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AT5G37600 | 1 | ||
Beta vulgaris | Orthologous gene family | many-to-many | BV0G80720 BV9G10840 | 2 | |
Tree-based ortholog | 1-to-1 | BV9G10840 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BV9G10840 | 1 | ||
Brassica rapa | Orthologous gene family | many-to-many | BR00G09560 BR01G31680 BR02G08000 ... | 10 | |
Tree-based ortholog | 1-to-1 | BR04G07740 | 1 | ||
Anchor point | 1-to-1 | BR04G07740 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BR04G07740 | 1 | ||
Capsella rubella | Orthologous gene family | many-to-many | CRU_001G35640 CRU_002G11410 CRU_003G16760 ... | 6 | |
Tree-based ortholog | 1-to-1 | CRU_007G31380 | 1 | ||
Anchor point | 1-to-1 | CRU_007G31380 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CRU_007G31380 | 1 | ||
Carica papaya | Orthologous gene family | many-to-many | CP00003G03650 CP00016G00480 CP00298G00010 | 3 | |
Tree-based ortholog | 1-to-many | CP00298G00010 CP00116G00730 CP00003G03650 | 3 | ||
Anchor point | 1-to-1 | CP00116G00730 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CP00003G03650 | 1 | ||
Chlamydomonas reinhardtii | Orthologous gene family | many-to-1 | CR02G10060 | 1 | |
Tree-based ortholog | 1-to-many | CR02G10060 CR03G12780 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CR02G10060 | 1 | ||
Citrullus lanatus | Orthologous gene family | many-to-many | CL03G08520 CL05G06190 CL05G12680 ... | 4 | |
Tree-based ortholog | 1-to-1 | CL03G08520 | 1 | ||
Anchor point | 1-to-many | CL03G08520 CL05G12680 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CL03G08520 | 1 | ||
Citrus sinensis | Orthologous gene family | many-to-many | CS00011G01860 CS00157G00420 CS00197G00240 | 3 | |
Tree-based ortholog | 1-to-many | CS00157G00420 CS00197G00240 | 2 | ||
Anchor point | 1-to-1 | CS00197G00240 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CS00197G00240 | 1 | ||
Cucumis melo | Orthologous gene family | many-to-many | CM00006G06810 CM00042G00420 CM00055G00590 ... | 4 | |
Tree-based ortholog | 1-to-1 | CM00055G00590 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CM00042G00420 | 1 | ||
Eucalyptus grandis | Orthologous gene family | many-to-many | EG0002G09620 EG0006G23910 EG0007G19990 ... | 6 | |
Tree-based ortholog | 1-to-many | EG0010G14030 EG0010G14000 EG0007G19990 ... | 7 | ||
Anchor point | 1-to-many | EG0002G24350 EG0006G23910 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | EG0006G23910 | 1 | ||
Fragaria vesca | Orthologous gene family | many-to-many | FV1G29100 FV3G37990 FV4G15890 ... | 5 | |
Tree-based ortholog | 1-to-many | FV4G23570 FV1G29100 FV3G37990 ... | 4 | ||
Anchor point | 1-to-1 | FV1G29100 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | FV1G29100 | 1 | ||
Glycine max | Orthologous gene family | many-to-many | GM02G41120 GM07G11810 GM09G30370 ... | 8 | |
Tree-based ortholog | 1-to-many | GM14G39420 GM15G21061 GM02G41120 ... | 5 | ||
Anchor point | 1-to-many | GM11G33560 GM18G04650 GM02G41106 | 3 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | GM11G33560 GM18G04660 | 2 | ||
Gossypium raimondii | Orthologous gene family | many-to-many | GR01G20330 GR02G01590 GR05G03580 ... | 7 | |
Tree-based ortholog | 1-to-many | GR06G19110 GR02G01590 GR12G13340 ... | 6 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | GR01G20330 | 1 | ||
Lotus japonicus | Orthologous gene family | many-to-many | LJ2G010560 LJ6G003380 LJ6G023100 | 3 | |
Tree-based ortholog | 1-to-1 | LJ6G003380 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | LJ6G003380 | 1 | ||
Malus domestica | Orthologous gene family | many-to-many | MD00G289630 MD00G300110 | 2 | |
Tree-based ortholog | 1-to-many | MD00G300110 MD00G289630 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | MD00G300110 | 1 | ||
Manihot esculenta | Orthologous gene family | many-to-many | ME05019G00240 ME07520G00210 ME11714G00020 ... | 4 | |
Tree-based ortholog | 1-to-many | ME12270G00110 ME07520G00210 | 2 | ||
Anchor point | 1-to-1 | ME07520G00210 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | ME12270G00110 ME07520G00210 | 2 | ||
Medicago truncatula | Orthologous gene family | many-to-many | MT2G021242 MT2G021255 MT3G065250 ... | 5 | |
Tree-based ortholog | 1-to-many | MT5G077950 MT3G065250 | 2 | ||
Anchor point | 1-to-1 | MT5G077950 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | MT3G065250 | 1 | ||
Oryza sativa ssp. japonica | Orthologous gene family | many-to-many | OS02G50240 OS03G12290 OS03G50490 ... | 4 | |
Tree-based ortholog | 1-to-many | OS02G50240 OS03G50490 OS03G12290 | 3 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OS02G50240 | 1 | ||
Physcomitrella patens | Orthologous gene family | many-to-many | PP00019G01220 PP00019G01240 PP00345G00020 ... | 4 | |
Tree-based ortholog | 1-to-1 | PP00044G00020 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PP00345G00030 PP00019G01220 PP00019G01240 ... | 4 | ||
Populus trichocarpa | Orthologous gene family | many-to-many | PT04G08540 PT05G09320 PT07G06960 ... | 8 | |
Tree-based ortholog | 1-to-many | PT07G06960 PT05G09320 PT12G04390 ... | 7 | ||
Anchor point | 1-to-1 | PT04G08540 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PT12G04390 PT15G03470 | 2 | ||
Prunus persica | Orthologous gene family | many-to-many | PPE_001G14130 PPE_001G35510 PPE_003G14820 ... | 4 | |
Tree-based ortholog | 1-to-many | PPE_001G35510 PPE_005G23700 PPE_003G14820 | 3 | ||
Anchor point | 1-to-1 | PPE_003G14820 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PPE_003G14820 | 1 | ||
Ricinus communis | Orthologous gene family | many-to-many | RC29675G00050 RC29726G00330 | 2 | |
Tree-based ortholog | 1-to-1 | RC29675G00050 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | RC29675G00050 | 1 | ||
Solanum lycopersicum | Orthologous gene family | many-to-many | SL01G080280 SL04G014510 SL05G051250 ... | 5 | |
Tree-based ortholog | 1-to-many | SL05G051250 SL11G011380 | 2 | ||
Anchor point | 1-to-many | SL05G051250 SL11G011380 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | SL11G011380 | 1 | ||
Solanum tuberosum | Orthologous gene family | many-to-many | ST01G022730 ST04G011590 ST05G023590 ... | 5 | |
Tree-based ortholog | 1-to-many | ST05G023590 ST11G008040 | 2 | ||
Anchor point | 1-to-many | ST05G023590 ST11G008040 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ST11G008040 | 1 | ||
Thellungiella parvula | Orthologous gene family | many-to-many | TP1G35420 TP3G15940 TP5G21260 ... | 6 | |
Tree-based ortholog | 1-to-1 | TP7G04500 | 1 | ||
Anchor point | 1-to-many | TP5G21260 TP7G04500 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TP7G04500 | 1 | ||
Theobroma cacao | Orthologous gene family | many-to-many | TC0002G15490 TC0003G06220 TC0004G05350 ... | 4 | |
Tree-based ortholog | 1-to-many | TC0002G15490 TC0004G05350 TC0003G06220 | 3 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TC0004G05350 | 1 | ||
Vitis vinifera | Orthologous gene family | many-to-many | VV01G08900 VV05G04000 VV07G04450 ... | 5 | |
Tree-based ortholog | 1-to-many | VV01G08900 VV17G07610 VV14G06270 | 3 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | VV14G06270 | 1 | ||
Zea mays | Orthologous gene family | many-to-many | ZM01G08320 ZM01G50630 ZM04G24190 ... | 5 | |
Tree-based ortholog | 1-to-many | ZM05G39540 ZM04G24190 ZM01G50630 ... | 5 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | ZM05G39540 ZM04G24190 | 2 |