Integrative Orthology Viewer: AL7G34130 (Arabidopsis lyrata)
Inparalogs
Organism | Source | Genes | #genes | Details |
---|---|---|---|---|
Arabidopsis lyrata | Orthologous gene family | AL5G01100 AL7G34130 | 2 | |
Tree-based ortholog | AL7G34130 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | AL7G34130 | 1 |
Orthologs
Organism | Source | Type | Genes | #genes | Details |
---|---|---|---|---|---|
Amborella trichopoda | Tree-based ortholog | 1-to-1 | ATR_00024G00630 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ATR_00048G00940 | 1 | ||
Arabidopsis thaliana | Orthologous gene family | many-to-many | AT1G14670 AT2G01970 AT5G37310 | 3 | |
Tree-based ortholog | 1-to-1 | AT5G37310 | 1 | ||
Anchor point | N/A | AT5G37310 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AT5G37310 | 1 | ||
Beta vulgaris | Orthologous gene family | many-to-many | BV9G19870 BV9G19890 | 2 | |
Tree-based ortholog | 1-to-many | BV9G19890 BV9G19870 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | BV9G19870 BV9G19890 | 2 | ||
Brassica rapa | Orthologous gene family | many-to-many | BR08G09200 BR08G27350 BR08G27370 | 3 | |
Tree-based ortholog | 1-to-1 | BR08G09200 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BR08G09200 | 1 | ||
Capsella rubella | Orthologous gene family | many-to-many | CRU_001G13800 CRU_005G00910 CRU_007G31040 | 3 | |
Tree-based ortholog | 1-to-1 | CRU_007G31040 | 1 | ||
Anchor point | N/A | CRU_007G31040 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CRU_007G31040 | 1 | ||
Carica papaya | Tree-based ortholog | 1-to-1 | CP00178G00110 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CP00178G00110 | 1 | ||
Chlamydomonas reinhardtii | Tree-based ortholog | 1-to-many | CR16G05670 CR01G05380 | 2 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CR01G05380 | 1 | ||
Citrullus lanatus | Orthologous gene family | many-to-many | CL01G06640 CL04G12560 | 2 | |
Tree-based ortholog | 1-to-1 | CL04G12560 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CL04G12560 | 1 | ||
Citrus sinensis | Tree-based ortholog | 1-to-1 | CS00082G00230 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CS00082G00230 | 1 | ||
Cucumis melo | Orthologous gene family | many-to-1 | CM00004G00560 | 1 | |
Tree-based ortholog | 1-to-1 | CM00001G00200 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CM00001G00200 | 1 | ||
Eucalyptus grandis | Orthologous gene family | many-to-many | EG0007G15530 EG0008G05070 EG0011G19060 | 3 | |
Tree-based ortholog | 1-to-many | EG0007G15520 EG0003G09470 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | EG0008G05070 | 1 | ||
Fragaria vesca | Orthologous gene family | many-to-1 | FV2G44000 | 1 | |
Tree-based ortholog | 1-to-1 | FV5G15980 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | FV4G24680 | 1 | ||
Glycine max | Orthologous gene family | many-to-many | GM05G26750 GM08G09740 GM16G34500 | 3 | |
Tree-based ortholog | 1-to-many | GM09G29960 GM16G34500 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | GM08G09740 GM05G26750 | 2 | ||
Gossypium raimondii | Orthologous gene family | many-to-many | GR01G08310 GR02G17050 GR09G32930 | 3 | |
Tree-based ortholog | 1-to-many | GR01G19800 GR01G08310 GR07G18820 | 3 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | GR01G08310 | 1 | ||
Lotus japonicus | Tree-based ortholog | 1-to-1 | LJ2G009070 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | LJ4G039560 | 1 | ||
Malus domestica | Orthologous gene family | many-to-many | MD06G020180 MD13G000870 MD14G022480 ... | 4 | |
Tree-based ortholog | 1-to-many | MD00G073150 MD06G020200 MD06G020180 ... | 4 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | MD06G020180 MD14G022480 | 2 | ||
Manihot esculenta | Orthologous gene family | many-to-many | ME08799G00800 ME08799G00810 ME08799G00820 ... | 5 | |
Tree-based ortholog | 1-to-many | ME08799G00800 ME10173G00380 ME08799G00810 ... | 6 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | ME10173G00380 ME08799G00820 ME08799G00810 ... | 5 | ||
Medicago truncatula | Orthologous gene family | many-to-many | MT5G077170 MT6G074910 | 2 | |
Tree-based ortholog | 1-to-1 | MT6G074910 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | MT6G074910 | 1 | ||
Oryza sativa ssp. japonica | Tree-based ortholog | 1-to-many | OS03G13380 OS10G02350 | 2 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OS03G13380 | 1 | ||
Ostreococcus lucimarinus | Tree-based ortholog | 1-to-1 | OL20G02940 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OL20G02940 | 1 | ||
Physcomitrella patens | Tree-based ortholog | 1-to-many | PP00373G00050 PP00019G00570 PP00193G00210 ... | 4 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PP00128G00180 PP00193G00210 | 2 | ||
Populus trichocarpa | Orthologous gene family | many-to-many | PT00G04500 PT00G04510 PT00G16290 ... | 5 | |
Tree-based ortholog | 1-to-many | PT04G07550 PT00G04510 PT00G04500 ... | 5 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PT00G16300 PT00G04510 PT00G16290 ... | 5 | ||
Prunus persica | Orthologous gene family | many-to-many | PPE_001G34750 PPE_005G24040 | 2 | |
Tree-based ortholog | 1-to-1 | PPE_005G24040 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PPE_001G34750 | 1 | ||
Ricinus communis | Orthologous gene family | many-to-1 | RC30055G00220 | 1 | |
Tree-based ortholog | 1-to-many | RC29780G00680 RC29780G00670 RC29780G00690 | 3 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | RC29780G00680 | 1 | ||
Solanum lycopersicum | Orthologous gene family | many-to-many | SL04G014570 SL05G054040 SL11G011910 | 3 | |
Tree-based ortholog | 1-to-many | SL04G014570 SL05G054040 SL11G011910 | 3 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | SL05G054040 | 1 | ||
Solanum tuberosum | Orthologous gene family | many-to-many | ST04G011650 ST05G026970 ST11G007330 | 3 | |
Tree-based ortholog | 1-to-many | ST04G011650 ST05G026970 ST11G007330 | 3 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ST05G026970 | 1 | ||
Thellungiella parvula | Orthologous gene family | many-to-1 | TP1G13050 | 1 | |
Tree-based ortholog | 1-to-1 | TP5G21060 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TP1G13050 | 1 | ||
Theobroma cacao | Orthologous gene family | many-to-many | TC0002G30100 TC0004G00180 | 2 | |
Tree-based ortholog | 1-to-1 | TC0004G00180 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TC0002G30100 | 1 | ||
Vitis vinifera | Orthologous gene family | many-to-1 | VV01G05180 | 1 | |
Tree-based ortholog | 1-to-1 | VV01G05180 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | VV01G05180 | 1 | ||
Zea mays | Tree-based ortholog | 1-to-many | ZM01G09160 ZM09G25140 | 2 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | ZM09G25140 ZM01G09160 | 2 |