Expansion plot
Gene family finder
Ks-graphs
Skyline plot
Synteny plot
WGDotplot
Functional clusters
WGMapping
BLAST
Workbench
Integrative Orthology Viewer:
AL7G18280
(Arabidopsis lyrata)
Inparalogs
| Organism | Source | Genes | #genes | Details |
|---|---|---|---|---|
| Arabidopsis lyrata | Orthologous gene family | AL7G18280 | 1 |  |
| Tree-based ortholog | AL7G18280 | 1 | ||
| Anchor point | AL6G33440 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | AL7G18280 | 1 |
Orthologs
| Organism | Source | Type | Genes | #genes | Details |
|---|---|---|---|---|---|
| Amborella trichopoda | Tree-based ortholog | 1-to-1 | ATR_00021G02660 | 1 | |
| Anchor point | 1-to-1 | ATR_00021G02660 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ATR_00021G02660 | 1 | ||
| Arabidopsis thaliana | Tree-based ortholog | 1-to-1 | AT4G23900 | 1 | |
| Anchor point | 1-to-many | AT4G11010 AT4G23900 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | AT4G23900 AT4G23895 | 2 | ||
| Beta vulgaris | Tree-based ortholog | 1-to-1 | BV5G05920 | 1 | |
| Anchor point | 1-to-1 | BV5G05920 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BV5G05920 | 1 | ||
| Brassica rapa | Tree-based ortholog | 1-to-1 | BR01G13870 | 1 | |
| Anchor point | 1-to-1 | BR01G13870 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BR01G13870 | 1 | ||
| Capsella rubella | Tree-based ortholog | 1-to-1 | CRU_007G16310 | 1 | |
| Anchor point | 1-to-many | CRU_006G28700 CRU_007G16310 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CRU_007G16310 | 1 | ||
| Carica papaya | Tree-based ortholog | 1-to-1 | CP00079G00260 | 1 | |
| Anchor point | 1-to-1 | CP00079G00260 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CP00079G00260 | 1 | ||
| Chlamydomonas reinhardtii | Tree-based ortholog | 1-to-many | CR07G03210 CR16G01940 CR12G13180 ... | 4 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CR16G01940 | 1 | ||
| Citrullus lanatus | Tree-based ortholog | 1-to-1 | CL07G14420 | 1 | |
| Anchor point | 1-to-1 | CL07G14420 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CL07G14420 | 1 | ||
| Citrus sinensis | Tree-based ortholog | 1-to-1 | CS00009G02280 | 1 | |
| Anchor point | 1-to-1 | CS00009G02280 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CS00009G02280 | 1 | ||
| Cucumis melo | Tree-based ortholog | 1-to-1 | CM00027G02420 | 1 | |
| Anchor point | 1-to-1 | CM00027G02420 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CM00027G02420 | 1 | ||
| Eucalyptus grandis | Tree-based ortholog | 1-to-1 | EG0005G07400 | 1 | |
| Anchor point | 1-to-1 | EG0005G07400 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | EG0005G07400 | 1 | ||
| Fragaria vesca | Tree-based ortholog | 1-to-1 | FV5G05350 | 1 | |
| Anchor point | 1-to-1 | FV5G05350 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | FV5G05350 | 1 | ||
| Glycine max | Tree-based ortholog | 1-to-many | GM05G36900 GM08G02630 | 2 | |
| Anchor point | 1-to-1 | GM05G36900 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | GM08G02630 GM05G36900 | 2 | ||
| Gossypium raimondii | Tree-based ortholog | 1-to-many | GR08G25480 GR06G20760 | 2 | |
| Anchor point | 1-to-many | GR06G20760 GR08G25480 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | GR08G25480 | 1 | ||
| Lotus japonicus | Tree-based ortholog | 1-to-many | LJ2G036470 LJ4G046800 | 2 | |
| Anchor point | 1-to-many | LJ4G046800 LJ2G036470 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | LJ2G036470 | 1 | ||
| Malus domestica | Tree-based ortholog | 1-to-many | MD06G009960 MD00G293340 MD00G363010 ... | 5 | |
| Anchor point | 1-to-1 | MD02G017070 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | MD06G009960 MD00G293340 | 2 | ||
| Manihot esculenta | Tree-based ortholog | 1-to-many | ME00148G00070 ME03175G00320 | 2 | |
| Anchor point | 1-to-1 | ME03175G00320 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | ME00148G00070 ME03175G00320 | 2 | ||
| Medicago truncatula | Tree-based ortholog | 1-to-1 | MT8G099450 | 1 | |
| Anchor point | 1-to-1 | MT8G099450 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | MT8G099450 | 1 | ||
| Oryza sativa ssp. japonica | Tree-based ortholog | 1-to-1 | OS05G51700 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OS05G51700 | 1 | ||
| Ostreococcus lucimarinus | Tree-based ortholog | 1-to-many | OL14G00050 OL11G03100 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OL14G00050 | 1 | ||
| Physcomitrella patens | Tree-based ortholog | 1-to-many | PP00276G00090 PP00015G00730 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PP00276G00090 PP00015G00730 | 2 | ||
| Populus trichocarpa | Tree-based ortholog | 1-to-1 | PT03G14060 | 1 | |
| Anchor point | 1-to-many | PT01G09100 PT03G14060 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PT03G14060 | 1 | ||
| Prunus persica | Tree-based ortholog | 1-to-1 | PPE_005G12890 | 1 | |
| Anchor point | 1-to-1 | PPE_005G12890 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PPE_005G12890 | 1 | ||
| Ricinus communis | Tree-based ortholog | 1-to-1 | RC30190G05510 | 1 | |
| Anchor point | 1-to-1 | RC30190G05510 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | RC30190G05510 | 1 | ||
| Solanum lycopersicum | Tree-based ortholog | 1-to-1 | SL08G008340 | 1 | |
| Anchor point | 1-to-many | SL08G008340 SL08G082430 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | SL08G008340 | 1 | ||
| Solanum tuberosum | Tree-based ortholog | 1-to-1 | ST08G009480 | 1 | |
| Anchor point | 1-to-many | ST08G027900 ST08G009480 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ST08G027900 | 1 | ||
| Thellungiella parvula | Tree-based ortholog | 1-to-1 | TP7G21870 | 1 | |
| Anchor point | 1-to-1 | TP7G21870 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TP7G21870 | 1 | ||
| Theobroma cacao | Tree-based ortholog | 1-to-1 | TC0003G29390 | 1 | |
| Anchor point | 1-to-1 | TC0003G29390 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TC0003G29390 | 1 | ||
| Vitis vinifera | Tree-based ortholog | 1-to-1 | VV02G04650 | 1 | |
| Anchor point | 1-to-1 | VV02G04650 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | VV02G04650 | 1 | ||
| Zea mays | Tree-based ortholog | 1-to-many | ZM02G22870 ZM02G14330 ZM10G09260 ... | 5 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ZM06G32810 | 1 |