Expansion plot
Gene family finder
Ks-graphs
Skyline plot
Synteny plot
WGDotplot
Functional clusters
WGMapping
BLAST
Workbench
Integrative Orthology Viewer:
AL7G17480
(Arabidopsis lyrata)
Inparalogs
| Organism | Source | Genes | #genes | Details |
|---|---|---|---|---|
| Arabidopsis lyrata | Orthologous gene family | AL7G17480 | 1 |  |
| Tree-based ortholog | AL7G17480 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | AL7G17480 | 1 |
Orthologs
| Organism | Source | Type | Genes | #genes | Details |
|---|---|---|---|---|---|
| Amborella trichopoda | Tree-based ortholog | 1-to-many | ATR_00135G00420 ATR_00038G00070 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ATR_00038G00070 | 1 | ||
| Arabidopsis thaliana | Orthologous gene family | 1-to-1 | AT4G24660 | 1 | |
| Tree-based ortholog | 1-to-1 | AT4G24660 | 1 | ||
| Anchor point | N/A | AT4G24660 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AT4G24660 | 1 | ||
| Beta vulgaris | Orthologous gene family | 1-to-1 | BV1G10020 | 1 | |
| Tree-based ortholog | 1-to-many | BV6G05430 BV1G10020 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BV6G05430 | 1 | ||
| Brassica rapa | Orthologous gene family | 1-to-1 | BR01G14660 | 1 | |
| Tree-based ortholog | 1-to-1 | BR08G17880 | 1 | ||
| Anchor point | N/A | BR08G17880 BR01G14660 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BR01G14660 | 1 | ||
| Capsella rubella | Orthologous gene family | 1-to-1 | CRU_007G15520 | 1 | |
| Tree-based ortholog | 1-to-1 | CRU_007G15520 | 1 | ||
| Anchor point | N/A | CRU_007G15520 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CRU_007G15520 | 1 | ||
| Carica papaya | Orthologous gene family | 1-to-1 | CP01076G00010 | 1 | |
| Tree-based ortholog | 1-to-many | CP01076G00010 CP00055G00520 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CP00055G00520 | 1 | ||
| Citrullus lanatus | Orthologous gene family | 1-to-1 | CL08G11200 | 1 | |
| Tree-based ortholog | 1-to-many | CL08G11200 CL01G18760 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CL08G11200 | 1 | ||
| Citrus sinensis | Orthologous gene family | 1-to-1 | CS00004G02700 | 1 | |
| Tree-based ortholog | 1-to-many | CS00004G02700 CS00059G00450 | 2 | ||
| Anchor point | N/A | CS00059G00450 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CS00004G02700 | 1 | ||
| Cucumis melo | Orthologous gene family | 1-to-1 | CM00014G04280 | 1 | |
| Tree-based ortholog | 1-to-many | CM00014G04280 CM00007G07560 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CM00014G04280 | 1 | ||
| Eucalyptus grandis | Orthologous gene family | 1-to-1 | EG0006G03490 | 1 | |
| Tree-based ortholog | 1-to-1 | EG0006G03490 | 1 | ||
| Anchor point | N/A | EG0006G03490 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | EG0006G03490 | 1 | ||
| Fragaria vesca | Orthologous gene family | 1-to-1 | FV5G20620 | 1 | |
| Tree-based ortholog | 1-to-many | FV5G20620 FV1G24790 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | FV5G20620 | 1 | ||
| Glycine max | Orthologous gene family | 1-to-many | GM02G37481 GM04G09910 GM06G09970 ... | 4 | |
| Tree-based ortholog | 1-to-many | GM06G09970 GM04G09910 GM14G35770 ... | 18 | ||
| Anchor point | N/A | GM02G04550 GM06G09970 GM14G35770 | 3 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | GM02G37481 GM06G09970 GM14G35770 ... | 4 | ||
| Gossypium raimondii | Orthologous gene family | 1-to-1 | GR10G03630 | 1 | |
| Tree-based ortholog | 1-to-many | GR10G03630 GR09G23180 GR07G23380 ... | 5 | ||
| Anchor point | N/A | GR09G23180 GR10G03630 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | GR10G03630 | 1 | ||
| Lotus japonicus | Orthologous gene family | 1-to-1 | LJ1G022810 | 1 | |
| Tree-based ortholog | 1-to-many | LJ1G022810 LJ1G002680 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | LJ1G022810 | 1 | ||
| Malus domestica | Orthologous gene family | 1-to-many | MD08G018260 MD15G029950 | 2 | |
| Tree-based ortholog | 1-to-many | MD08G018260 MD00G085320 MD15G029950 ... | 5 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | MD08G018260 | 1 | ||
| Manihot esculenta | Orthologous gene family | 1-to-many | ME04059G00120 ME06916G02050 | 2 | |
| Tree-based ortholog | 1-to-many | ME04059G00120 ME06916G02050 ME08261G00020 ... | 4 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | ME06916G02050 ME04059G00120 | 2 | ||
| Medicago truncatula | Orthologous gene family | 1-to-many | MT3G100650 MT5G065440 | 2 | |
| Tree-based ortholog | 1-to-many | MT6G080300 MT7G070643 MT5G065440 ... | 8 | ||
| Anchor point | N/A | MT3G100650 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | MT3G100650 | 1 | ||
| Oryza sativa ssp. japonica | Tree-based ortholog | 1-to-many | OS08G37400 OS09G29130 | 2 | |
| Anchor point | N/A | OS08G37400 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | OS08G37400 OS09G29130 | 2 | ||
| Physcomitrella patens | Tree-based ortholog | 1-to-many | PP00230G00360 PP00165G00520 PP00153G00520 ... | 8 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PP00165G00520 PP00003G02180 PP00235G00550 ... | 6 | ||
| Populus trichocarpa | Orthologous gene family | 1-to-many | PT02G10290 PT05G15880 | 2 | |
| Tree-based ortholog | 1-to-many | PT02G10290 PT05G15880 | 2 | ||
| Anchor point | N/A | PT05G15880 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PT02G10290 PT05G15880 | 2 | ||
| Prunus persica | Orthologous gene family | 1-to-1 | PPE_001G58800 | 1 | |
| Tree-based ortholog | 1-to-many | PPE_001G58800 PPE_006G20330 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PPE_006G20330 | 1 | ||
| Ricinus communis | Orthologous gene family | 1-to-1 | RC29908G02690 | 1 | |
| Tree-based ortholog | 1-to-1 | RC29908G02690 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | RC29908G02690 | 1 | ||
| Solanum lycopersicum | Tree-based ortholog | 1-to-many | SL04G074990 SL04G014260 SL05G051420 | 3 | |
| Anchor point | N/A | SL04G074990 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | SL04G014260 | 1 | ||
| Solanum tuberosum | Tree-based ortholog | 1-to-many | ST04G029680 ST04G011310 ST05G023870 | 3 | |
| Anchor point | N/A | ST04G029680 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ST04G011310 | 1 | ||
| Thellungiella parvula | Orthologous gene family | 1-to-1 | TP7G22650 | 1 | |
| Tree-based ortholog | 1-to-1 | TP7G22650 | 1 | ||
| Anchor point | N/A | TP2G28490 TP7G22650 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TP7G22650 | 1 | ||
| Theobroma cacao | Orthologous gene family | 1-to-1 | TC0008G06500 | 1 | |
| Tree-based ortholog | 1-to-many | TC0008G06500 TC0001G08900 | 2 | ||
| Anchor point | N/A | TC0001G08900 TC0008G06500 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TC0008G06500 | 1 | ||
| Vitis vinifera | Tree-based ortholog | 1-to-many | VV18G04260 VV00G06890 | 2 | |
| Anchor point | N/A | VV00G06890 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | VV18G04260 | 1 | ||
| Zea mays | Tree-based ortholog | 1-to-many | ZM01G35530 ZM02G31990 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | ZM02G31990 ZM01G35530 | 2 |