Integrative Orthology Viewer: AL7G17030 (Arabidopsis lyrata)
Inparalogs
Organism | Source | Genes | #genes | Details |
---|---|---|---|---|
Arabidopsis lyrata | Orthologous gene family | AL0G07350 AL1G08720 AL1G20180 ... | 11 | |
Tree-based ortholog | AL7G17030 | 1 | ||
Anchor point | AL8G15270 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | AL7G17030 | 1 |
Orthologs
Organism | Source | Type | Genes | #genes | Details |
---|---|---|---|---|---|
Amborella trichopoda | Orthologous gene family | many-to-many | ATR_00007G03310 ATR_00016G02960 ATR_00023G01150 ... | 4 | |
Tree-based ortholog | 1-to-1 | ATR_00016G02960 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ATR_00016G02960 | 1 | ||
Arabidopsis thaliana | Orthologous gene family | many-to-many | AT1G09090 AT1G19230 AT1G64060 ... | 10 | |
Tree-based ortholog | 1-to-1 | AT4G25090 | 1 | ||
Anchor point | 1-to-many | AT4G25090 AT5G51060 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AT4G25090 | 1 | ||
Beta vulgaris | Orthologous gene family | many-to-many | BV4G09350 BV5G06800 BV7G07390 ... | 4 | |
Tree-based ortholog | 1-to-1 | BV4G09350 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BV4G09350 | 1 | ||
Brassica rapa | Orthologous gene family | many-to-many | BR02G11830 BR02G27150 BR02G34590 ... | 13 | |
Tree-based ortholog | 1-to-many | BR03G48270 BR03G48290 | 2 | ||
Anchor point | 1-to-many | BR03G48270 BR03G14780 BR01G15060 | 3 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BR03G14780 | 1 | ||
Capsella rubella | Orthologous gene family | many-to-many | CRU_001G08000 CRU_001G18030 CRU_002G00800 ... | 10 | |
Tree-based ortholog | 1-to-1 | CRU_007G15090 | 1 | ||
Anchor point | 1-to-many | CRU_008G10860 CRU_007G15080 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CRU_007G15090 | 1 | ||
Carica papaya | Orthologous gene family | many-to-many | CP00013G01910 CP00038G00470 CP00048G00840 ... | 9 | |
Tree-based ortholog | 1-to-1 | CP00013G01910 | 1 | ||
Anchor point | 1-to-1 | CP00013G01910 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CP00013G01910 | 1 | ||
Chlamydomonas reinhardtii | Tree-based ortholog | 1-to-many | CR03G10280 CR03G10260 | 2 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | CR03G10260 CR03G10280 | 2 | ||
Citrullus lanatus | Orthologous gene family | many-to-many | CL01G02130 CL02G20690 CL06G16210 ... | 5 | |
Tree-based ortholog | 1-to-1 | CL10G11290 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CL10G11290 | 1 | ||
Citrus sinensis | Orthologous gene family | many-to-many | CS00009G01550 CS00013G01980 CS00014G01290 ... | 7 | |
Tree-based ortholog | 1-to-1 | CS00087G00240 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CS00401G00020 | 1 | ||
Cucumis melo | Orthologous gene family | many-to-many | CM00005G06920 CM00005G06930 CM00025G00920 ... | 7 | |
Tree-based ortholog | 1-to-1 | CM00104G00250 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CM00104G00250 | 1 | ||
Eucalyptus grandis | Orthologous gene family | many-to-many | EG0003G06280 EG0005G06630 EG0006G20400 ... | 7 | |
Tree-based ortholog | 1-to-1 | EG0010G14500 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | EG0010G14500 | 1 | ||
Fragaria vesca | Orthologous gene family | many-to-many | FV0G32610 FV1G10900 FV5G03740 ... | 6 | |
Tree-based ortholog | 1-to-1 | FV0G41080 | 1 | ||
Anchor point | 1-to-1 | FV5G09870 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | FV0G41080 | 1 | ||
Glycine max | Orthologous gene family | many-to-many | GM01G43190 GM03G39610 GM04G38040 ... | 19 | |
Tree-based ortholog | 1-to-many | GM05G33280 GM08G00880 GM04G38040 ... | 4 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | GM19G42220 GM03G39610 | 2 | ||
Gossypium raimondii | Orthologous gene family | many-to-many | GR01G01740 GR01G05330 GR01G10650 ... | 13 | |
Tree-based ortholog | 1-to-many | GR01G05330 GR03G11790 GR08G21210 | 3 | ||
Anchor point | 1-to-1 | GR01G05330 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | GR09G20250 | 1 | ||
Lotus japonicus | Orthologous gene family | many-to-many | LJ1G020110 LJ1G045790 LJ4G044660 ... | 9 | |
Tree-based ortholog | 1-to-many | LJ4G044660 LJ4G044670 LJ1G020110 | 3 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | LJ1G020110 | 1 | ||
Malus domestica | Orthologous gene family | many-to-many | MD00G387530 MD01G008660 MD02G027650 ... | 13 | |
Tree-based ortholog | 1-to-1 | MD07G004420 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | MD04G005460 | 1 | ||
Manihot esculenta | Orthologous gene family | many-to-many | ME00506G00270 ME00620G00120 ME01701G00960 ... | 9 | |
Tree-based ortholog | 1-to-many | ME01701G00960 ME09876G01070 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ME00620G00120 | 1 | ||
Medicago truncatula | Orthologous gene family | many-to-many | MT1G083290 MT2G043900 MT3G098320 ... | 10 | |
Tree-based ortholog | 1-to-many | MT8G095520 MT3G098320 MT3G098350 ... | 4 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | MT1G083290 | 1 | ||
Oryza sativa ssp. japonica | Orthologous gene family | many-to-many | OS01G25820 OS01G53294 OS01G61880 ... | 9 | |
Tree-based ortholog | 1-to-1 | OS11G33120 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OS11G33120 | 1 | ||
Ostreococcus lucimarinus | Orthologous gene family | many-to-1 | OL16G00340 | 1 | |
Tree-based ortholog | 1-to-1 | OL16G00340 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OL16G00340 | 1 | ||
Physcomitrella patens | Orthologous gene family | many-to-many | PP00010G00120 PP00018G00970 PP00032G00240 ... | 4 | |
Tree-based ortholog | 1-to-many | PP00032G00240 PP00241G00210 PP00010G00120 ... | 5 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PP00241G00210 PP00010G00120 PP00032G00240 ... | 4 | ||
Populus trichocarpa | Orthologous gene family | many-to-many | PT01G07090 PT01G09830 PT03G13330 ... | 10 | |
Tree-based ortholog | 1-to-many | PT12G11160 PT15G10980 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PT15G10980 PT12G11160 | 2 | ||
Prunus persica | Orthologous gene family | many-to-many | PPE_001G21860 PPE_005G14600 PPE_005G20830 ... | 6 | |
Tree-based ortholog | 1-to-1 | PPE_005G14600 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PPE_001G21860 | 1 | ||
Ricinus communis | Orthologous gene family | many-to-many | RC29739G01400 RC29941G00030 RC30039G00130 ... | 7 | |
Tree-based ortholog | 1-to-1 | RC30147G02820 | 1 | ||
Anchor point | 1-to-1 | RC30147G02820 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | RC30147G02820 | 1 | ||
Solanum lycopersicum | Orthologous gene family | many-to-many | SL01G099620 SL03G117980 SL05G025680 ... | 8 | |
Tree-based ortholog | 1-to-many | SL03G117980 SL06G068680 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | SL03G117980 | 1 | ||
Solanum tuberosum | Orthologous gene family | many-to-many | ST01G037380 ST03G031420 ST05G016960 ... | 9 | |
Tree-based ortholog | 1-to-many | ST03G031420 ST06G025550 ST06G025580 | 3 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ST03G031420 | 1 | ||
Thellungiella parvula | Orthologous gene family | many-to-many | TP1G07690 TP1G17140 TP2G00650 ... | 10 | |
Tree-based ortholog | 1-to-1 | TP7G23080 | 1 | ||
Anchor point | 1-to-many | TP7G23080 TP6G13240 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TP7G23080 | 1 | ||
Theobroma cacao | Orthologous gene family | many-to-many | TC0003G10510 TC0003G14530 TC0003G28290 ... | 7 | |
Tree-based ortholog | 1-to-1 | TC0003G14530 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TC0008G02490 | 1 | ||
Vitis vinifera | Orthologous gene family | many-to-many | VV01G01480 VV01G01490 VV02G03780 ... | 7 | |
Tree-based ortholog | 1-to-1 | VV19G03030 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | VV01G01490 VV01G01480 | 2 | ||
Zea mays | Orthologous gene family | many-to-many | ZM01G20940 ZM01G37420 ZM02G42940 ... | 16 | |
Tree-based ortholog | 1-to-many | ZM02G42960 ZM02G42940 ZM02G42980 ... | 4 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | ZM02G42940 ZM02G42960 | 2 |