Integrative Orthology Viewer: AL7G06680 (Arabidopsis lyrata)
Inparalogs
Organism | Source | Genes | #genes | Details |
---|---|---|---|---|
Arabidopsis lyrata | Orthologous gene family | AL3G34570 AL7G06680 | 2 | |
Tree-based ortholog | AL7G06680 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | AL7G06680 | 1 |
Orthologs
Organism | Source | Type | Genes | #genes | Details |
---|---|---|---|---|---|
Amborella trichopoda | Orthologous gene family | many-to-many | ATR_00001G05250 ATR_00029G00170 | 2 | |
Tree-based ortholog | 1-to-many | ATR_00001G05250 ATR_00029G00170 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | ATR_00029G00170 ATR_00001G05250 | 2 | ||
Arabidopsis thaliana | Orthologous gene family | many-to-many | AT2G14880 AT4G34290 | 2 | |
Tree-based ortholog | 1-to-1 | AT4G34290 | 1 | ||
Anchor point | N/A | AT4G34290 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AT4G34290 | 1 | ||
Beta vulgaris | Orthologous gene family | many-to-1 | BV6G23100 | 1 | |
Tree-based ortholog | 1-to-1 | BV6G23100 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BV6G23100 | 1 | ||
Brassica rapa | Orthologous gene family | many-to-many | BR01G03830 BR03G54130 | 2 | |
Tree-based ortholog | 1-to-many | BR03G54130 BR01G03830 | 2 | ||
Anchor point | N/A | BR03G54130 BR01G03830 BR08G14080 | 3 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | BR03G54130 BR01G03830 | 2 | ||
Capsella rubella | Orthologous gene family | many-to-many | CRU_003G27890 CRU_007G05730 | 2 | |
Tree-based ortholog | 1-to-many | CRU_003G27890 CRU_007G05730 | 2 | ||
Anchor point | N/A | CRU_003G27890 CRU_007G05730 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CRU_007G05730 | 1 | ||
Carica papaya | Orthologous gene family | many-to-many | CP00200G00030 CP42255G00010 | 2 | |
Tree-based ortholog | 1-to-1 | CP00200G00030 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CP00200G00030 | 1 | ||
Chlamydomonas reinhardtii | Tree-based ortholog | 1-to-1 | CR02G11240 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CR02G11240 | 1 | ||
Citrullus lanatus | Orthologous gene family | many-to-1 | CL02G06750 | 1 | |
Tree-based ortholog | 1-to-1 | CL02G06750 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CL05G02720 | 1 | ||
Citrus sinensis | Orthologous gene family | many-to-1 | CS00084G00050 | 1 | |
Tree-based ortholog | 1-to-1 | CS00084G00050 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CS00084G00050 | 1 | ||
Cucumis melo | Orthologous gene family | many-to-1 | CM00034G01100 | 1 | |
Tree-based ortholog | 1-to-1 | CM00034G01100 | 1 | ||
Anchor point | N/A | CM00034G01100 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CM00034G01100 | 1 | ||
Eucalyptus grandis | Orthologous gene family | many-to-1 | EG0007G09430 | 1 | |
Tree-based ortholog | 1-to-1 | EG0007G09430 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | EG0007G09430 | 1 | ||
Fragaria vesca | Orthologous gene family | many-to-1 | FV2G03570 | 1 | |
Tree-based ortholog | 1-to-1 | FV2G03570 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | FV2G03570 | 1 | ||
Glycine max | Orthologous gene family | many-to-many | GM01G45430 GM11G00300 | 2 | |
Tree-based ortholog | 1-to-many | GM01G45430 GM11G00300 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | GM01G45430 GM11G00300 | 2 | ||
Gossypium raimondii | Orthologous gene family | many-to-many | GR05G23340 GR08G02120 | 2 | |
Tree-based ortholog | 1-to-many | GR05G23340 GR08G02120 | 2 | ||
Anchor point | N/A | GR05G23990 GR08G02120 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | GR08G02120 GR05G23340 | 2 | ||
Lotus japonicus | Orthologous gene family | many-to-1 | LJ1G000470 | 1 | |
Tree-based ortholog | 1-to-1 | LJ1G000470 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | LJ1G000470 | 1 | ||
Malus domestica | Orthologous gene family | many-to-many | MD00G222480 MD00G222500 | 2 | |
Tree-based ortholog | 1-to-many | MD00G222480 MD00G222490 MD00G222500 | 3 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | MD00G222500 MD00G222480 | 2 | ||
Manihot esculenta | Orthologous gene family | many-to-many | ME12742G00010 ME12742G00020 | 2 | |
Tree-based ortholog | 1-to-many | ME12742G00020 ME12742G00010 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ME12742G00010 | 1 | ||
Medicago truncatula | Orthologous gene family | many-to-1 | MT5G005200 | 1 | |
Tree-based ortholog | 1-to-1 | MT5G005200 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | MT5G005200 | 1 | ||
Oryza sativa ssp. japonica | Orthologous gene family | many-to-many | OS03G55310 OS12G32280 | 2 | |
Tree-based ortholog | 1-to-1 | OS12G32280 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OS03G55310 | 1 | ||
Ostreococcus lucimarinus | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OL16G00880 | 1 | |
Physcomitrella patens | Tree-based ortholog | 1-to-1 | PP00083G00090 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PP00083G00090 | 1 | ||
Populus trichocarpa | Orthologous gene family | many-to-many | PT01G29740 PT09G09220 | 2 | |
Tree-based ortholog | 1-to-many | PT09G09220 PT01G29740 | 2 | ||
Anchor point | N/A | PT09G09220 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PT09G09220 PT01G29740 | 2 | ||
Prunus persica | Orthologous gene family | many-to-1 | PPE_008G15720 | 1 | |
Tree-based ortholog | 1-to-1 | PPE_008G15720 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PPE_008G15720 | 1 | ||
Ricinus communis | Orthologous gene family | many-to-1 | RC29801G00130 | 1 | |
Tree-based ortholog | 1-to-1 | RC29801G00130 | 1 | ||
Anchor point | N/A | RC29801G00130 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | RC29801G00130 | 1 | ||
Solanum lycopersicum | Orthologous gene family | many-to-1 | SL01G107330 | 1 | |
Tree-based ortholog | 1-to-1 | SL01G107330 | 1 | ||
Anchor point | N/A | SL01G107330 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | SL01G107330 | 1 | ||
Solanum tuberosum | Orthologous gene family | many-to-many | ST01G044490 ST12G025210 | 2 | |
Tree-based ortholog | 1-to-many | ST01G044490 ST12G025210 | 2 | ||
Anchor point | N/A | ST01G044490 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ST01G044490 | 1 | ||
Thellungiella parvula | Orthologous gene family | many-to-many | TP3G28300 TP7G32090 | 2 | |
Tree-based ortholog | 1-to-1 | TP3G28300 | 1 | ||
Anchor point | N/A | TP7G32090 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TP7G32090 | 1 | ||
Theobroma cacao | Orthologous gene family | many-to-1 | TC0002G10820 | 1 | |
Tree-based ortholog | 1-to-1 | TC0002G10820 | 1 | ||
Anchor point | N/A | TC0002G10820 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TC0002G10820 | 1 | ||
Vitis vinifera | Orthologous gene family | many-to-1 | VV03G10240 | 1 | |
Tree-based ortholog | 1-to-many | VV15G02880 VV02G09170 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | VV03G10240 | 1 | ||
Zea mays | Orthologous gene family | many-to-many | ZM05G03840 ZM06G03350 | 2 | |
Tree-based ortholog | 1-to-1 | ZM06G03350 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ZM05G03840 | 1 |