Integrative Orthology Viewer: AL7G06270 (Arabidopsis lyrata)
Inparalogs
Organism | Source | Genes | #genes | Details |
---|---|---|---|---|
Arabidopsis lyrata | Orthologous gene family | AL7G06270 AL7G06280 | 2 | |
Tree-based ortholog | AL7G06270 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | AL7G06270 | 1 |
Orthologs
Organism | Source | Type | Genes | #genes | Details |
---|---|---|---|---|---|
Amborella trichopoda | Orthologous gene family | many-to-1 | ATR_00003G02230 | 1 | |
Tree-based ortholog | 1-to-1 | ATR_00003G02230 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ATR_00003G02230 | 1 | ||
Arabidopsis thaliana | Orthologous gene family | many-to-many | AT4G34640 AT4G34650 | 2 | |
Tree-based ortholog | 1-to-1 | AT4G34650 | 1 | ||
Anchor point | N/A | AT4G34640 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AT4G34650 | 1 | ||
Beta vulgaris | Orthologous gene family | many-to-many | BV9G12630 BV9G12640 | 2 | |
Tree-based ortholog | 1-to-many | BV9G12640 BV9G12630 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | BV9G12640 BV9G12630 | 2 | ||
Brassica rapa | Orthologous gene family | many-to-many | BR01G03530 BR01G03540 BR03G54320 ... | 4 | |
Tree-based ortholog | 1-to-many | BR01G03530 BR03G54330 | 2 | ||
Anchor point | N/A | BR03G54320 BR08G13840 BR01G03530 | 3 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BR01G03530 | 1 | ||
Capsella rubella | Orthologous gene family | many-to-many | CRU_007G05310 CRU_007G05320 | 2 | |
Tree-based ortholog | 1-to-1 | CRU_007G05310 | 1 | ||
Anchor point | N/A | CRU_007G05310 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CRU_007G05310 | 1 | ||
Carica papaya | Orthologous gene family | many-to-1 | CP00150G00330 | 1 | |
Tree-based ortholog | 1-to-1 | CP00150G00330 | 1 | ||
Anchor point | N/A | CP00150G00330 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CP00150G00330 | 1 | ||
Chlamydomonas reinhardtii | Orthologous gene family | many-to-1 | CR03G07500 | 1 | |
Tree-based ortholog | 1-to-1 | CR03G07500 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CR03G07500 | 1 | ||
Citrullus lanatus | Orthologous gene family | many-to-1 | CL11G14940 | 1 | |
Tree-based ortholog | 1-to-1 | CL11G14940 | 1 | ||
Anchor point | N/A | CL11G14940 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CL11G14940 | 1 | ||
Citrus sinensis | Orthologous gene family | many-to-1 | CS00474G00030 | 1 | |
Tree-based ortholog | 1-to-1 | CS00474G00030 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CS00474G00030 | 1 | ||
Cucumis melo | Orthologous gene family | many-to-1 | CM00059G01660 | 1 | |
Tree-based ortholog | 1-to-1 | CM00059G01660 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CM00059G01660 | 1 | ||
Eucalyptus grandis | Orthologous gene family | many-to-1 | EG0007G12600 | 1 | |
Tree-based ortholog | 1-to-1 | EG0007G12600 | 1 | ||
Anchor point | N/A | EG0007G12600 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | EG0007G12600 | 1 | ||
Fragaria vesca | Orthologous gene family | many-to-1 | FV2G16920 | 1 | |
Tree-based ortholog | 1-to-1 | FV2G16920 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | FV2G16920 | 1 | ||
Glycine max | Orthologous gene family | many-to-many | GM11G11960 GM12G04220 | 2 | |
Tree-based ortholog | 1-to-many | GM12G04220 GM11G11960 | 2 | ||
Anchor point | N/A | GM12G04220 GM11G11960 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | GM12G04220 GM11G11960 | 2 | ||
Gossypium raimondii | Orthologous gene family | many-to-many | GR02G00440 GR05G24770 | 2 | |
Tree-based ortholog | 1-to-many | GR05G24770 GR02G00440 | 2 | ||
Anchor point | N/A | GR05G24770 GR02G00440 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | GR02G00440 | 1 | ||
Malus domestica | Orthologous gene family | many-to-many | MD00G472300 MD10G008050 | 2 | |
Tree-based ortholog | 1-to-many | MD00G472300 MD10G008050 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | MD10G008050 | 1 | ||
Manihot esculenta | Orthologous gene family | many-to-many | ME02994G00260 ME03116G00090 | 2 | |
Tree-based ortholog | 1-to-many | ME02994G00260 ME03116G00090 | 2 | ||
Anchor point | N/A | ME02994G00260 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ME03116G00090 | 1 | ||
Medicago truncatula | Orthologous gene family | many-to-1 | MT4G071520 | 1 | |
Tree-based ortholog | 1-to-1 | MT4G071520 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | MT4G071520 | 1 | ||
Oryza sativa ssp. japonica | Orthologous gene family | many-to-many | OS03G59040 OS07G10130 | 2 | |
Tree-based ortholog | 1-to-many | OS07G10130 OS03G59040 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OS03G59040 | 1 | ||
Ostreococcus lucimarinus | Orthologous gene family | many-to-1 | OL04G02090 | 1 | |
Tree-based ortholog | 1-to-1 | OL04G02090 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OL04G02090 | 1 | ||
Physcomitrella patens | Orthologous gene family | many-to-many | PP00160G00120 PP00198G00640 | 2 | |
Tree-based ortholog | 1-to-many | PP00198G00640 PP00160G00120 PP00023G00780 | 3 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PP00160G00120 PP00198G00640 | 2 | ||
Populus trichocarpa | Orthologous gene family | many-to-1 | PT09G12310 | 1 | |
Tree-based ortholog | 1-to-many | PT09G12310 PT04G16120 | 2 | ||
Anchor point | N/A | PT09G12310 PT04G16120 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PT09G12310 | 1 | ||
Prunus persica | Orthologous gene family | many-to-1 | PPE_008G10480 | 1 | |
Tree-based ortholog | 1-to-1 | PPE_008G10480 | 1 | ||
Anchor point | N/A | PPE_008G10480 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PPE_008G10480 | 1 | ||
Ricinus communis | Orthologous gene family | many-to-1 | RC30131G02640 | 1 | |
Tree-based ortholog | 1-to-1 | RC30131G02640 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | RC30131G02640 | 1 | ||
Solanum lycopersicum | Orthologous gene family | many-to-many | SL01G110290 SL10G054130 SL10G079040 ... | 4 | |
Tree-based ortholog | 1-to-many | SL10G054130 SL01G110290 SL10G079060 ... | 4 | ||
Anchor point | N/A | SL01G110290 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | SL01G110290 | 1 | ||
Solanum tuberosum | Orthologous gene family | many-to-many | ST01G047720 ST10G018070 ST10G020730 | 3 | |
Tree-based ortholog | 1-to-many | ST10G018070 ST01G047720 ST10G020730 ... | 4 | ||
Anchor point | N/A | ST01G047720 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ST01G047720 | 1 | ||
Thellungiella parvula | Orthologous gene family | many-to-many | TP7G32430 TP7G32440 | 2 | |
Tree-based ortholog | 1-to-1 | TP7G32440 | 1 | ||
Anchor point | N/A | TP7G32430 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TP7G32440 | 1 | ||
Theobroma cacao | Orthologous gene family | many-to-1 | TC0002G07330 | 1 | |
Tree-based ortholog | 1-to-1 | TC0002G07330 | 1 | ||
Anchor point | N/A | TC0002G07330 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TC0002G07330 | 1 | ||
Vitis vinifera | Orthologous gene family | many-to-1 | VV03G06090 | 1 | |
Tree-based ortholog | 1-to-1 | VV03G06090 | 1 | ||
Anchor point | N/A | VV03G06090 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | VV03G06090 | 1 | ||
Zea mays | Orthologous gene family | many-to-many | ZM01G56690 ZM05G02310 | 2 | |
Tree-based ortholog | 1-to-many | ZM01G56690 ZM05G02310 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | ZM05G02310 ZM01G56690 | 2 |