Expansion plot
Gene family finder
Ks-graphs
Skyline plot
Synteny plot
WGDotplot
Functional clusters
WGMapping
BLAST
Workbench
Integrative Orthology Viewer:
AL7G02730
(Arabidopsis lyrata)
Inparalogs
| Organism | Source | Genes | #genes | Details |
|---|---|---|---|---|
| Arabidopsis lyrata | Orthologous gene family | AL7G02730 | 1 |  |
| Best-Hits-and-Inparalogs(BHI)family | AL7G02730 AL7G03440 | 2 | ||
| Tree-based ortholog | AL7G02710 AL7G02730 | 2 |
Orthologs
| Organism | Source | Type | Genes | #genes | Details |
|---|---|---|---|---|---|
| Amborella trichopoda | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | ATR_00010G03180 | 1 | |
| Tree-based ortholog | many-to-1 | ATR_00010G03180 | 1 | ||
| Arabidopsis thaliana | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | AT5G49000 | 1 | |
| Tree-based ortholog | many-to-many | AT3G24610 AT4G36840 | 2 | ||
| Beta vulgaris | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | BV6G05790 | 1 | |
| Tree-based ortholog | many-to-1 | BV6G05790 | 1 | ||
| Brassica rapa | Orthologous gene family | 1-to-many | BR08G26300 BR10G08930 BR10G08950 | 3 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-many | BR10G08930 BR08G26300 BR10G08950 | 3 | ||
| Tree-based ortholog | many-to-many | BR08G19520 BR01G00930 | 2 | ||
| Capsella rubella | Orthologous gene family | 1-to-many | CRU_003G05150 CRU_008G06130 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CRU_008G06130 | 1 | ||
| Tree-based ortholog | many-to-1 | CRU_008G06130 | 1 | ||
| Carica papaya | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CP00191G00030 | 1 | |
| Tree-based ortholog | many-to-1 | CP00191G00030 | 1 | ||
| Citrullus lanatus | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CL09G16160 | 1 | |
| Citrus sinensis | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CS00004G01660 | 1 | |
| Cucumis melo | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CM00006G01960 | 1 | |
| Eucalyptus grandis | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | EG0009G02620 | 1 | |
| Tree-based ortholog | many-to-many | EG0009G02620 EG0005G24860 | 2 | ||
| Fragaria vesca | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | FV6G01530 | 1 | |
| Tree-based ortholog | many-to-1 | FV6G01530 | 1 | ||
| Glycine max | Best-Hits-and-Inparalogs(BHI)family | many-to-many | GM04G39720 GM06G15150 | 2 | |
| Tree-based ortholog | many-to-many | GM06G15150 GM04G39720 | 2 | ||
| Gossypium raimondii | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | GR07G06220 | 1 | |
| Tree-based ortholog | many-to-1 | GR07G06220 | 1 | ||
| Lotus japonicus | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | LJ1G017580 | 1 | |
| Tree-based ortholog | many-to-1 | LJ1G017580 | 1 | ||
| Malus domestica | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | MD17G017130 | 1 | |
| Tree-based ortholog | many-to-1 | MD17G017130 | 1 | ||
| Manihot esculenta | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | ME02473G00020 | 1 | |
| Tree-based ortholog | many-to-1 | ME02473G00020 | 1 | ||
| Medicago truncatula | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | MT3G094850 | 1 | |
| Tree-based ortholog | many-to-1 | MT3G094850 | 1 | ||
| Oryza sativa ssp. japonica | Best-Hits-and-Inparalogs(BHI)family | many-to-many | OS02G30210 OS04G31120 | 2 | |
| Tree-based ortholog | many-to-1 | OS07G47650 | 1 | ||
| Ostreococcus lucimarinus | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | OL03G05160 | 1 | |
| Physcomitrella patens | Best-Hits-and-Inparalogs(BHI)family | many-to-many | PP00030G00100 PP00059G01790 | 2 | |
| Populus trichocarpa | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | PT07G08110 | 1 | |
| Tree-based ortholog | many-to-1 | PT07G08110 | 1 | ||
| Prunus persica | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | PPE_006G17950 | 1 | |
| Tree-based ortholog | many-to-1 | PPE_006G17950 | 1 | ||
| Ricinus communis | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | RC28256G00060 | 1 | |
| Tree-based ortholog | many-to-1 | RC28256G00060 | 1 | ||
| Solanum lycopersicum | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | SL04G051870 | 1 | |
| Tree-based ortholog | many-to-1 | SL04G051870 | 1 | ||
| Solanum tuberosum | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | ST04G021110 | 1 | |
| Tree-based ortholog | many-to-1 | ST04G021110 | 1 | ||
| Thellungiella parvula | Orthologous gene family | 1-to-1 | TP7G31430 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | many-to-1 | TP7G31430 | 1 | ||
| Tree-based ortholog | many-to-many | TP6G32200 TP7G31430 | 2 | ||
| Theobroma cacao | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | TC0001G10840 | 1 | |
| Tree-based ortholog | many-to-1 | TC0001G10840 | 1 | ||
| Vitis vinifera | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | VV07G06330 | 1 | |
| Tree-based ortholog | many-to-1 | VV07G06330 | 1 | ||
| Zea mays | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | ZM04G17120 | 1 | |
| Tree-based ortholog | many-to-1 | ZM02G40810 | 1 |