Expansion plot
Gene family finder
Ks-graphs
Skyline plot
Synteny plot
WGDotplot
Functional clusters
WGMapping
BLAST
Workbench
Integrative Orthology Viewer:
AL7G00790
(Arabidopsis lyrata)
Inparalogs
| Organism | Source | Genes | #genes | Details |
|---|---|---|---|---|
| Arabidopsis lyrata | Orthologous gene family | AL7G00790 | 1 |  |
| Tree-based ortholog | AL7G00790 | 1 | ||
| Anchor point | AL4G00390 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | AL7G00790 | 1 |
Orthologs
| Organism | Source | Type | Genes | #genes | Details |
|---|---|---|---|---|---|
| Amborella trichopoda | Tree-based ortholog | 1-to-1 | ATR_00185G00220 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ATR_00006G01730 | 1 | ||
| Arabidopsis thaliana | Orthologous gene family | 1-to-1 | AT4G38910 | 1 | |
| Tree-based ortholog | 1-to-1 | AT4G38910 | 1 | ||
| Anchor point | 1-to-many | AT2G21240 AT4G38910 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AT4G38910 | 1 | ||
| Beta vulgaris | Tree-based ortholog | 1-to-1 | BV0G53250 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BV1G07050 | 1 | ||
| Brassica rapa | Tree-based ortholog | 1-to-many | BR01G00160 BR08G20190 | 2 | |
| Anchor point | 1-to-many | BR01G00160 BR08G20190 BR06G39610 ... | 5 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BR01G00160 | 1 | ||
| Capsella rubella | Tree-based ortholog | 1-to-1 | CRU_004G00290 | 1 | |
| Anchor point | 1-to-1 | CRU_004G00290 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CRU_004G00290 | 1 | ||
| Carica papaya | Tree-based ortholog | 1-to-1 | CP00150G00090 | 1 | |
| Anchor point | 1-to-1 | CP00150G00090 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CP00150G00090 | 1 | ||
| Citrullus lanatus | Tree-based ortholog | 1-to-1 | CL02G04710 | 1 | |
| Anchor point | 1-to-many | CL08G14210 CL02G04710 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CL02G04710 | 1 | ||
| Citrus sinensis | Tree-based ortholog | 1-to-1 | CS00623G00030 | 1 | |
| Anchor point | 1-to-1 | CS00002G05200 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CS00623G00030 | 1 | ||
| Cucumis melo | Tree-based ortholog | 1-to-1 | CM00019G03170 | 1 | |
| Anchor point | 1-to-many | CM00014G03580 CM00019G03170 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CM00019G03170 | 1 | ||
| Eucalyptus grandis | Tree-based ortholog | 1-to-1 | EG0009G10720 | 1 | |
| Anchor point | 1-to-1 | EG0009G10720 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | EG0009G10720 | 1 | ||
| Fragaria vesca | Tree-based ortholog | 1-to-1 | FV2G17510 | 1 | |
| Anchor point | 1-to-1 | FV2G17510 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | FV2G17510 | 1 | ||
| Glycine max | Tree-based ortholog | 1-to-many | GM08G01240 GM05G38430 | 2 | |
| Anchor point | 1-to-many | GM04G02860 GM06G02880 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | GM05G38430 GM08G01240 | 2 | ||
| Gossypium raimondii | Tree-based ortholog | 1-to-1 | GR01G24370 | 1 | |
| Anchor point | 1-to-1 | GR02G12490 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | GR01G24370 | 1 | ||
| Lotus japonicus | Tree-based ortholog | 1-to-1 | LJ4G045140 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | LJ4G045140 | 1 | ||
| Malus domestica | Tree-based ortholog | 1-to-many | MD00G435520 MD10G008450 MD00G076120 | 3 | |
| Anchor point | 1-to-many | MD08G001170 MD12G015010 MD10G008450 | 3 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | MD00G435520 MD00G076120 MD10G008450 | 3 | ||
| Manihot esculenta | Tree-based ortholog | 1-to-many | ME01579G00010 ME02994G00070 | 2 | |
| Anchor point | 1-to-1 | ME02994G00070 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ME01579G00010 | 1 | ||
| Medicago truncatula | Tree-based ortholog | 1-to-1 | MT8G099780 | 1 | |
| Anchor point | 1-to-1 | MT1G023660 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | MT8G099780 | 1 | ||
| Oryza sativa ssp. japonica | Tree-based ortholog | 1-to-1 | OS06G04010 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OS06G04010 | 1 | ||
| Physcomitrella patens | Tree-based ortholog | 1-to-1 | PP00056G00020 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PP00056G00020 | 1 | ||
| Populus trichocarpa | Tree-based ortholog | 1-to-many | PT04G16370 PT09G12530 | 2 | |
| Anchor point | 1-to-many | PT05G23590 PT02G02670 PT04G16370 ... | 4 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PT04G16370 PT09G12530 | 2 | ||
| Prunus persica | Tree-based ortholog | 1-to-1 | PPE_008G10070 | 1 | |
| Anchor point | 1-to-many | PPE_001G37770 PPE_008G10070 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PPE_008G10070 | 1 | ||
| Ricinus communis | Tree-based ortholog | 1-to-1 | RC30131G02900 | 1 | |
| Anchor point | 1-to-many | RC30170G05000 RC30131G02900 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | RC30131G02900 | 1 | ||
| Solanum lycopersicum | Tree-based ortholog | 1-to-1 | SL01G110470 | 1 | |
| Anchor point | 1-to-many | SL01G110470 SL02G084230 SL04G081170 | 3 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | SL01G110470 | 1 | ||
| Solanum tuberosum | Tree-based ortholog | 1-to-1 | ST01G047920 | 1 | |
| Anchor point | 1-to-many | ST02G027470 ST01G047920 ST04G034550 | 3 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ST01G047920 | 1 | ||
| Thellungiella parvula | Tree-based ortholog | 1-to-1 | TP7G36930 | 1 | |
| Anchor point | 1-to-many | TP7G36930 TP4G00440 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TP7G36930 | 1 | ||
| Theobroma cacao | Tree-based ortholog | 1-to-1 | TC0002G07050 | 1 | |
| Anchor point | 1-to-many | TC0002G07050 TC0008G03750 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TC0002G07050 | 1 | ||
| Vitis vinifera | Tree-based ortholog | 1-to-1 | VV03G05790 | 1 | |
| Anchor point | 1-to-many | VV03G05790 VV18G10050 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | VV03G05790 | 1 | ||
| Zea mays | Tree-based ortholog | 1-to-1 | ZM09G05720 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ZM09G05720 | 1 |