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Integrative Orthology Viewer:
AL6G39120
(Arabidopsis lyrata)
Inparalogs
| Organism | Source | Genes | #genes | Details |
|---|---|---|---|---|
| Arabidopsis lyrata | Orthologous gene family | AL1G24490 AL1G25040 AL2G19290 ... | 8 |  |
| Tree-based ortholog | AL6G39120 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | AL6G39120 | 1 |
Orthologs
| Organism | Source | Type | Genes | #genes | Details |
|---|---|---|---|---|---|
| Amborella trichopoda | Orthologous gene family | many-to-many | ATR_00010G01270 ATR_00018G01670 ATR_00027G01540 ... | 5 | |
| Tree-based ortholog | 1-to-1 | ATR_00003G00840 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ATR_00010G01270 | 1 | ||
| Arabidopsis thaliana | Orthologous gene family | many-to-many | AT1G02800 AT1G22880 AT1G23210 ... | 9 | |
| Tree-based ortholog | 1-to-1 | AT4G02290 | 1 | ||
| Anchor point | N/A | AT4G02290 AT1G02800 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AT4G02290 | 1 | ||
| Beta vulgaris | Orthologous gene family | many-to-many | BV1G11440 BV3G06000 BV4G13960 ... | 6 | |
| Tree-based ortholog | 1-to-1 | BV7G12700 | 1 | ||
| Anchor point | N/A | BV7G12700 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BV7G12700 | 1 | ||
| Brassica rapa | Orthologous gene family | many-to-many | BR01G00200 BR01G00210 BR02G21040 ... | 14 | |
| Tree-based ortholog | 1-to-1 | BR05G15730 | 1 | ||
| Anchor point | N/A | BR05G15730 BR09G54260 BR09G00560 | 3 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BR05G15730 | 1 | ||
| Capsella rubella | Orthologous gene family | many-to-many | CRU_001G01720 CRU_001G21470 CRU_001G21870 ... | 9 | |
| Tree-based ortholog | 1-to-1 | CRU_006G33670 | 1 | ||
| Anchor point | N/A | CRU_001G01720 CRU_006G33670 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CRU_006G33670 | 1 | ||
| Carica papaya | Orthologous gene family | many-to-many | CP00002G02170 CP00003G03090 CP00003G03100 ... | 6 | |
| Tree-based ortholog | 1-to-1 | CP00151G00210 | 1 | ||
| Anchor point | N/A | CP00151G00210 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CP00151G00210 | 1 | ||
| Chlamydomonas reinhardtii | Tree-based ortholog | 1-to-many | CR17G07600 CR17G07580 CR06G04900 | 3 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | CR06G04900 CR17G07580 CR17G07600 | 3 | ||
| Citrullus lanatus | Orthologous gene family | many-to-many | CL01G05060 CL01G06210 CL08G00430 ... | 7 | |
| Tree-based ortholog | 1-to-many | CL10G09320 CL09G05150 | 2 | ||
| Anchor point | N/A | CL09G05150 CL10G09320 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CL09G05150 | 1 | ||
| Citrus sinensis | Orthologous gene family | many-to-many | CS00001G07240 CS00009G03010 CS00031G00770 ... | 7 | |
| Tree-based ortholog | 1-to-1 | CS00001G07240 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CS00001G07240 | 1 | ||
| Cucumis melo | Orthologous gene family | many-to-many | CM00005G02430 CM00005G04200 CM00021G00770 ... | 7 | |
| Tree-based ortholog | 1-to-many | CM00031G04220 CM00026G02890 | 2 | ||
| Anchor point | N/A | CM00031G04220 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CM00026G02890 | 1 | ||
| Eucalyptus grandis | Orthologous gene family | many-to-many | EG0001G24570 EG0001G24580 EG0002G24110 ... | 8 | |
| Tree-based ortholog | 1-to-1 | EG0008G09440 | 1 | ||
| Anchor point | N/A | EG0008G09440 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | EG0008G09440 | 1 | ||
| Fragaria vesca | Orthologous gene family | many-to-many | FV0G08240 FV0G41850 FV2G15960 ... | 11 | |
| Tree-based ortholog | 1-to-1 | FV2G28340 | 1 | ||
| Anchor point | N/A | FV2G28340 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | FV2G28340 | 1 | ||
| Glycine max | Orthologous gene family | many-to-many | GM02G01990 GM03G37420 GM04G01030 ... | 17 | |
| Tree-based ortholog | 1-to-many | GM02G01990 GM10G02130 GM03G37420 ... | 4 | ||
| Anchor point | N/A | GM02G01990 GM19G40030 GM10G02130 ... | 4 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | GM02G01990 GM10G02130 | 2 | ||
| Gossypium raimondii | Orthologous gene family | many-to-many | GR01G04810 GR02G17570 GR03G07730 ... | 8 | |
| Tree-based ortholog | 1-to-1 | GR07G12690 | 1 | ||
| Anchor point | N/A | GR07G12690 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | GR07G12690 | 1 | ||
| Lotus japonicus | Orthologous gene family | many-to-many | LJ1G042980 LJ1G071140 LJ3G028180 ... | 5 | |
| Tree-based ortholog | 1-to-1 | LJ1G071140 | 1 | ||
| Anchor point | N/A | LJ5G028050 LJ1G071140 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | LJ1G071140 | 1 | ||
| Malus domestica | Orthologous gene family | many-to-many | MD00G331500 MD02G020000 MD13G028530 | 3 | |
| Tree-based ortholog | 1-to-1 | MD00G371280 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | MD00G331500 | 1 | ||
| Manihot esculenta | Orthologous gene family | many-to-many | ME00977G00100 ME01127G00580 ME03116G00010 ... | 8 | |
| Tree-based ortholog | 1-to-1 | ME04457G00500 | 1 | ||
| Anchor point | N/A | ME04457G00500 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ME04457G00500 | 1 | ||
| Medicago truncatula | Orthologous gene family | many-to-many | MT1G088190 MT3G010330 MT3G080810 ... | 8 | |
| Tree-based ortholog | 1-to-many | MT1G088190 MT7G108925 | 2 | ||
| Anchor point | N/A | MT1G088190 MT7G108925 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | MT1G088190 | 1 | ||
| Oryza sativa ssp. japonica | Orthologous gene family | many-to-many | OS01G21070 OS02G03120 OS02G50040 ... | 7 | |
| Tree-based ortholog | 1-to-1 | OS01G21070 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OS01G21070 | 1 | ||
| Physcomitrella patens | Orthologous gene family | many-to-many | PP00019G00560 PP00080G00260 PP00100G00730 ... | 5 | |
| Tree-based ortholog | 1-to-many | PP00080G00260 PP00376G00130 PP00019G00560 ... | 6 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PP00080G00260 PP00019G00560 PP00100G00730 ... | 4 | ||
| Populus trichocarpa | Orthologous gene family | many-to-many | PT01G08320 PT02G20240 PT03G14760 ... | 11 | |
| Tree-based ortholog | 1-to-many | PT02G20240 PT14G12690 | 2 | ||
| Anchor point | N/A | PT14G12690 PT02G20240 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PT14G12690 PT02G20240 | 2 | ||
| Prunus persica | Orthologous gene family | many-to-many | PPE_001G33940 PPE_002G12580 PPE_002G26710 ... | 8 | |
| Tree-based ortholog | 1-to-1 | PPE_008G27620 | 1 | ||
| Anchor point | N/A | PPE_008G27620 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PPE_008G27620 | 1 | ||
| Ricinus communis | Orthologous gene family | many-to-many | RC29692G00080 RC29986G00610 RC30068G00740 ... | 6 | |
| Tree-based ortholog | 1-to-1 | RC29986G00610 | 1 | ||
| Anchor point | N/A | RC29986G00610 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | RC29986G00610 | 1 | ||
| Solanum lycopersicum | Orthologous gene family | many-to-many | SL01G110340 SL03G083820 SL08G083210 ... | 6 | |
| Tree-based ortholog | 1-to-1 | SL09G075360 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | SL09G075360 | 1 | ||
| Solanum tuberosum | Orthologous gene family | many-to-many | ST01G047780 ST08G027130 ST09G009770 ... | 5 | |
| Tree-based ortholog | 1-to-1 | ST09G022910 | 1 | ||
| Anchor point | N/A | ST09G022910 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ST09G022910 | 1 | ||
| Thellungiella parvula | Orthologous gene family | many-to-many | TP1G01770 TP1G20680 TP5G25890 ... | 8 | |
| Tree-based ortholog | 1-to-1 | TP6G02180 | 1 | ||
| Anchor point | N/A | TP1G01770 TP6G02180 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TP6G02180 | 1 | ||
| Theobroma cacao | Orthologous gene family | many-to-many | TC0001G30210 TC0002G07220 TC0002G28830 ... | 7 | |
| Tree-based ortholog | 1-to-1 | TC0001G30210 | 1 | ||
| Anchor point | N/A | TC0001G30210 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TC0001G30210 | 1 | ||
| Vitis vinifera | Orthologous gene family | many-to-many | VV02G05710 VV03G05940 VV07G08610 ... | 6 | |
| Tree-based ortholog | 1-to-1 | VV07G08610 | 1 | ||
| Anchor point | N/A | VV07G08610 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | VV07G08610 | 1 | ||
| Zea mays | Orthologous gene family | many-to-many | ZM05G18000 ZM05G39440 ZM06G00930 ... | 7 | |
| Tree-based ortholog | 1-to-1 | ZM08G07190 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ZM08G07190 | 1 |