Integrative Orthology Viewer: AL6G37010 (Arabidopsis lyrata)
Inparalogs
Organism | Source | Genes | #genes | Details |
---|---|---|---|---|
Arabidopsis lyrata | Orthologous gene family | AL3G10000 AL6G37010 | 2 | |
Tree-based ortholog | AL6G37240 AL6G37010 AL2G11060 ... | 10 | ||
Best-Hits-and-Inparalogs(BHI)family | AL6G37010 AL6G37280 | 2 |
Orthologs
Organism | Source | Type | Genes | #genes | Details |
---|---|---|---|---|---|
Amborella trichopoda | Tree-based ortholog | many-to-many | ATR_00017G00350 ATR_00095G01110 ATR_00040G00710 ... | 6 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | ATR_00017G00350 | 1 | ||
Arabidopsis thaliana | Orthologous gene family | many-to-many | AT3G09790 AT4G02890 | 2 | |
Tree-based ortholog | many-to-many | AT4G02890 AT4G05050 AT5G03240 ... | 5 | ||
Anchor point | N/A | AT4G05050 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-many | AT4G02890 AT4G05320 | 2 | ||
Beta vulgaris | Tree-based ortholog | many-to-many | BV0G35620 BV0G70270 | 2 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | BV0G70270 | 1 | ||
Brassica rapa | Tree-based ortholog | many-to-many | BR10G28070 BR09G23520 | 2 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | BR10G28070 | 1 | ||
Capsella rubella | Orthologous gene family | many-to-1 | CRU_006G21510 | 1 | |
Tree-based ortholog | many-to-many | CRU_006G21510 CRU_002G10370 CRU_006G32000 ... | 6 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-many | CRU_006G32000 CRU_006G06840 | 2 | ||
Carica papaya | Tree-based ortholog | many-to-many | CP00097G00560 CP00198G00110 | 2 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CP00198G00110 | 1 | ||
Chlamydomonas reinhardtii | Tree-based ortholog | many-to-many | CR09G02660 CR06G05590 CR01G01690 ... | 10 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CR11G00450 | 1 | ||
Citrullus lanatus | Tree-based ortholog | many-to-many | CL10G05340 CL10G05350 | 2 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-many | CL10G05350 CL10G05340 | 2 | ||
Citrus sinensis | Tree-based ortholog | many-to-many | CS00172G00150 CS00152G00160 CS00400G00020 ... | 5 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CS00152G00160 | 1 | ||
Cucumis melo | Tree-based ortholog | many-to-many | CM00032G00410 CM00001G05860 | 2 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CM00032G00410 | 1 | ||
Eucalyptus grandis | Tree-based ortholog | many-to-many | EG0006G38100 EG0005G27970 EG0001G11550 ... | 13 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | EG0006G38100 | 1 | ||
Fragaria vesca | Tree-based ortholog | many-to-many | FV6G48500 FV3G23860 FV3G23680 ... | 5 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | FV3G23860 | 1 | ||
Glycine max | Orthologous gene family | many-to-many | GM10G05830 GM10G39780 GM13G17830 ... | 4 | |
Tree-based ortholog | many-to-many | GM20G27950 GM17G04690 GM13G20197 ... | 10 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-many | GM10G39780 GM20G27950 GM13G17830 ... | 4 | ||
Gossypium raimondii | Orthologous gene family | many-to-many | GR02G14760 GR11G01660 | 2 | |
Tree-based ortholog | many-to-many | GR02G08300 GR06G16780 GR02G14760 ... | 9 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-many | GR11G01660 GR09G42700 GR13G16350 ... | 5 | ||
Lotus japonicus | Tree-based ortholog | many-to-many | LJ4G009680 LJ3G029420 LJ5G035600 ... | 4 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-many | LJ5G035600 LJ3G029420 | 2 | ||
Malus domestica | Orthologous gene family | many-to-many | MD00G088850 MD00G113950 MD04G007270 | 3 | |
Tree-based ortholog | many-to-many | MD00G412770 MD00G113950 MD00G113960 ... | 4 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | MD05G001920 | 1 | ||
Manihot esculenta | Orthologous gene family | many-to-1 | ME06805G00030 | 1 | |
Tree-based ortholog | many-to-many | ME12753G00210 ME06914G01040 ME12498G00050 ... | 5 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | ME06805G00030 | 1 | ||
Medicago truncatula | Tree-based ortholog | many-to-many | MT4G088495 MT8G081020 MT1G066390 ... | 7 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-many | MT8G018230 MT4G080797 MT4G088495 | 3 | ||
Oryza sativa ssp. japonica | Tree-based ortholog | many-to-many | OS04G53620 OS02G06640 OS06G46770 ... | 4 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-many | OS05G42424 OS02G06640 OS06G46770 | 3 | ||
Ostreococcus lucimarinus | Tree-based ortholog | many-to-1 | OL12G01210 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | OL12G01210 | 1 | ||
Physcomitrella patens | Orthologous gene family | many-to-many | PP00072G00400 PP00227G00500 | 2 | |
Tree-based ortholog | many-to-many | PP00227G00500 PP00017G01110 PP00351G00020 ... | 26 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | PP00227G00500 | 1 | ||
Populus trichocarpa | Orthologous gene family | many-to-many | PT04G02150 PT06G12960 PT17G13560 | 3 | |
Tree-based ortholog | many-to-many | PT17G03680 PT07G12330 PT06G12960 ... | 8 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-many | PT07G12330 PT17G03680 PT01G41850 ... | 5 | ||
Prunus persica | Tree-based ortholog | many-to-many | PPE_004G19620 PPE_004G19550 PPE_006G24710 ... | 4 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-many | PPE_004G19620 PPE_004G02410 | 2 | ||
Ricinus communis | Tree-based ortholog | many-to-many | RC28644G00110 RC30169G00940 RC30174G04370 ... | 8 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | RC30169G00940 | 1 | ||
Solanum lycopersicum | Tree-based ortholog | many-to-many | SL11G005670 SL10G006480 | 2 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | SL10G006480 | 1 | ||
Solanum tuberosum | Tree-based ortholog | many-to-many | ST07G026130 ST10G005070 ST11G005910 | 3 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | ST07G026130 | 1 | ||
Thellungiella parvula | Tree-based ortholog | many-to-many | TP6G03750 TP6G03730 TP6G39490 | 3 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | TP6G39490 | 1 | ||
Theobroma cacao | Tree-based ortholog | many-to-many | TC0007G04970 TC0006G20750 TC0007G04990 ... | 6 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-many | TC0006G20750 TC0007G04970 TC0007G04990 | 3 | ||
Vitis vinifera | Tree-based ortholog | many-to-many | VV14G05340 VV14G05390 VV19G00450 | 3 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | VV14G05390 | 1 | ||
Zea mays | Tree-based ortholog | many-to-many | ZM04G39560 ZM04G39590 ZM05G19960 ... | 4 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | ZM04G39560 | 1 |