Integrative Orthology Viewer: AL6G36970 (Arabidopsis lyrata)
Inparalogs
Organism | Source | Genes | #genes | Details |
---|---|---|---|---|
Arabidopsis lyrata | Orthologous gene family | AL3G41730 AL6G36970 AL7G13620 ... | 4 | |
Tree-based ortholog | AL6G36970 | 1 | ||
Anchor point | AL7G21180 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | AL6G36970 | 1 |
Orthologs
Organism | Source | Type | Genes | #genes | Details |
---|---|---|---|---|---|
Amborella trichopoda | Orthologous gene family | many-to-many | ATR_00003G04130 ATR_00003G04150 | 2 | |
Tree-based ortholog | 1-to-many | ATR_00003G04130 ATR_00003G04150 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ATR_00003G04150 | 1 | ||
Arabidopsis thaliana | Orthologous gene family | many-to-many | AT2G20800 AT4G05020 AT4G21490 ... | 4 | |
Tree-based ortholog | 1-to-1 | AT4G05020 | 1 | ||
Anchor point | 1-to-many | AT4G21490 AT4G05020 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AT4G05020 | 1 | ||
Beta vulgaris | Orthologous gene family | many-to-many | BV8G10830 BV9G00360 | 2 | |
Tree-based ortholog | 1-to-many | BV8G10830 BV7G15600 | 2 | ||
Anchor point | 1-to-1 | BV8G10830 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BV8G10830 | 1 | ||
Brassica rapa | Orthologous gene family | many-to-many | BR02G08130 BR03G07130 BR03G50190 ... | 4 | |
Tree-based ortholog | 1-to-1 | BR09G23720 | 1 | ||
Anchor point | 1-to-1 | BR09G23720 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BR09G23720 | 1 | ||
Capsella rubella | Orthologous gene family | many-to-many | CRU_003G33970 CRU_006G31780 CRU_007G11810 ... | 4 | |
Tree-based ortholog | 1-to-1 | CRU_006G31780 | 1 | ||
Anchor point | 1-to-many | CRU_007G18990 CRU_006G31780 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CRU_006G31780 | 1 | ||
Carica papaya | Orthologous gene family | many-to-many | CP00027G01280 CP00034G00850 CP00034G00860 | 3 | |
Tree-based ortholog | 1-to-1 | CP00027G01280 | 1 | ||
Anchor point | 1-to-1 | CP00034G00850 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CP00027G01280 | 1 | ||
Chlamydomonas reinhardtii | Orthologous gene family | many-to-1 | CR00G00720 | 1 | |
Tree-based ortholog | 1-to-1 | CR00G00720 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CR00G00720 | 1 | ||
Citrullus lanatus | Orthologous gene family | many-to-many | CL02G00800 CL02G17500 CL03G05320 | 3 | |
Tree-based ortholog | 1-to-1 | CL03G05320 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CL03G05320 | 1 | ||
Citrus sinensis | Orthologous gene family | many-to-many | CS00010G02270 CS00108G00010 CS00108G00020 | 3 | |
Tree-based ortholog | 1-to-1 | CS00010G02270 | 1 | ||
Anchor point | 1-to-1 | CS00010G02270 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CS00010G02270 | 1 | ||
Cucumis melo | Orthologous gene family | many-to-many | CM00001G06630 CM00020G00820 CM00034G03920 | 3 | |
Tree-based ortholog | 1-to-1 | CM00001G06630 | 1 | ||
Anchor point | 1-to-1 | CM00007G03400 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CM00001G06630 | 1 | ||
Eucalyptus grandis | Orthologous gene family | many-to-many | EG0005G28530 EG0011G07700 EG0011G07740 ... | 5 | |
Tree-based ortholog | 1-to-1 | EG0005G28530 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | EG0005G28530 | 1 | ||
Fragaria vesca | Orthologous gene family | many-to-many | FV3G07180 FV6G40200 | 2 | |
Tree-based ortholog | 1-to-1 | FV3G07180 | 1 | ||
Anchor point | 1-to-1 | FV3G07180 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | FV3G07180 | 1 | ||
Glycine max | Orthologous gene family | many-to-many | GM06G45340 GM07G30920 GM08G06376 ... | 7 | |
Tree-based ortholog | 1-to-many | GM13G32030 GM15G07290 GM07G30920 ... | 4 | ||
Anchor point | 1-to-many | GM06G45331 GM07G30920 GM15G07290 | 3 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | GM08G06376 GM07G30920 | 2 | ||
Gossypium raimondii | Orthologous gene family | many-to-many | GR10G15000 GR11G02300 GR12G13170 | 3 | |
Tree-based ortholog | 1-to-many | GR10G15000 GR11G02300 | 2 | ||
Anchor point | 1-to-many | GR11G02300 GR10G15000 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | GR10G15000 | 1 | ||
Lotus japonicus | Orthologous gene family | many-to-many | LJ3G040680 LJ4G007850 | 2 | |
Tree-based ortholog | 1-to-1 | LJ4G007850 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | LJ4G007850 | 1 | ||
Malus domestica | Orthologous gene family | many-to-1 | MD00G107790 | 1 | |
Tree-based ortholog | 1-to-1 | MD00G107790 | 1 | ||
Anchor point | 1-to-1 | MD10G024220 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | MD10G024390 MD00G102460 | 2 | ||
Manihot esculenta | Orthologous gene family | many-to-many | ME10648G00040 ME11689G00080 ME11689G00090 | 3 | |
Tree-based ortholog | 1-to-1 | ME10648G00040 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ME10648G00040 | 1 | ||
Medicago truncatula | Orthologous gene family | many-to-many | MT2G011730 MT4G045993 MT4G045997 ... | 4 | |
Tree-based ortholog | 1-to-many | MT2G011730 MT4G091240 | 2 | ||
Anchor point | 1-to-1 | MT2G011730 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | MT4G091240 | 1 | ||
Oryza sativa ssp. japonica | Orthologous gene family | many-to-many | OS05G26660 OS06G47000 | 2 | |
Tree-based ortholog | 1-to-many | OS05G26660 OS08G04630 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OS06G47000 | 1 | ||
Ostreococcus lucimarinus | Orthologous gene family | many-to-1 | OL02G01250 | 1 | |
Tree-based ortholog | 1-to-1 | OL02G01250 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OL02G01250 | 1 | ||
Physcomitrella patens | Orthologous gene family | many-to-many | PP00036G01060 PP00065G01030 PP00082G00550 | 3 | |
Tree-based ortholog | 1-to-many | PP00065G01030 PP00036G01060 PP00082G00550 | 3 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PP00065G01030 PP00036G01060 PP00082G00550 | 3 | ||
Populus trichocarpa | Orthologous gene family | many-to-many | PT04G03410 PT11G04250 PT13G14720 ... | 5 | |
Tree-based ortholog | 1-to-many | PT11G04250 PT04G03410 | 2 | ||
Anchor point | 1-to-many | PT04G03410 PT13G14720 PT11G04250 | 3 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PT04G03410 PT11G04250 | 2 | ||
Prunus persica | Orthologous gene family | many-to-many | PPE_003G21080 PPE_003G21090 PPE_004G03550 | 3 | |
Tree-based ortholog | 1-to-1 | PPE_004G03550 | 1 | ||
Anchor point | 1-to-1 | PPE_004G03550 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PPE_004G03550 | 1 | ||
Ricinus communis | Orthologous gene family | many-to-many | RC29933G00470 RC29983G01640 RC29983G01650 | 3 | |
Tree-based ortholog | 1-to-1 | RC29933G00470 | 1 | ||
Anchor point | 1-to-1 | RC29933G00470 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | RC29933G00470 | 1 | ||
Solanum lycopersicum | Orthologous gene family | many-to-many | SL02G079170 SL07G054640 SL07G054670 ... | 4 | |
Tree-based ortholog | 1-to-1 | SL02G079170 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | SL02G079170 | 1 | ||
Solanum tuberosum | Orthologous gene family | many-to-many | ST02G022150 ST07G020210 ST07G020240 ... | 4 | |
Tree-based ortholog | 1-to-1 | ST02G022150 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ST02G022150 | 1 | ||
Thellungiella parvula | Orthologous gene family | many-to-many | TP6G03920 TP6G27250 TP7G19610 ... | 4 | |
Tree-based ortholog | 1-to-1 | TP6G03920 | 1 | ||
Anchor point | 1-to-many | TP7G19610 TP6G03920 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TP6G03920 | 1 | ||
Theobroma cacao | Orthologous gene family | many-to-many | TC0002G16670 TC0002G16700 TC0006G19430 | 3 | |
Tree-based ortholog | 1-to-1 | TC0006G19430 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TC0006G19430 | 1 | ||
Vitis vinifera | Orthologous gene family | many-to-many | VV12G09070 VV12G09080 | 2 | |
Tree-based ortholog | 1-to-many | VV00G17340 VV00G15470 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | VV12G09070 | 1 | ||
Zea mays | Orthologous gene family | many-to-many | ZM03G30150 ZM04G07900 | 2 | |
Tree-based ortholog | 1-to-many | ZM08G33800 ZM03G30150 ZM04G07900 | 3 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ZM04G07900 | 1 |