Integrative Orthology Viewer: AL6G33790 (Arabidopsis lyrata)
Inparalogs
Organism | Source | Genes | #genes | Details |
---|---|---|---|---|
Arabidopsis lyrata | Orthologous gene family | AL0G07350 AL1G08720 AL1G20180 ... | 11 | |
Tree-based ortholog | AL6G33790 | 1 | ||
Anchor point | AL2G00980 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | AL6G33790 | 1 |
Orthologs
Organism | Source | Type | Genes | #genes | Details |
---|---|---|---|---|---|
Amborella trichopoda | Orthologous gene family | many-to-many | ATR_00007G03310 ATR_00016G02960 ATR_00023G01150 ... | 4 | |
Tree-based ortholog | 1-to-1 | ATR_00007G03310 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ATR_00007G03310 | 1 | ||
Arabidopsis thaliana | Orthologous gene family | many-to-many | AT1G09090 AT1G19230 AT1G64060 ... | 10 | |
Tree-based ortholog | 1-to-1 | AT4G11230 | 1 | ||
Anchor point | 1-to-many | AT1G64060 AT4G11230 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AT4G11230 | 1 | ||
Beta vulgaris | Orthologous gene family | many-to-many | BV4G09350 BV5G06800 BV7G07390 ... | 4 | |
Tree-based ortholog | 1-to-1 | BV5G06800 | 1 | ||
Anchor point | 1-to-1 | BV5G06800 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BV5G06800 | 1 | ||
Brassica rapa | Orthologous gene family | many-to-many | BR02G11830 BR02G27150 BR02G34590 ... | 13 | |
Tree-based ortholog | 1-to-1 | BR02G27150 | 1 | ||
Anchor point | 1-to-many | BR02G27150 BR09G11590 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BR09G11590 | 1 | ||
Capsella rubella | Orthologous gene family | many-to-many | CRU_001G08000 CRU_001G18030 CRU_002G00800 ... | 10 | |
Tree-based ortholog | 1-to-1 | CRU_006G28960 | 1 | ||
Anchor point | 1-to-many | CRU_002G00800 CRU_006G28960 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CRU_006G28960 | 1 | ||
Carica papaya | Orthologous gene family | many-to-many | CP00013G01910 CP00038G00470 CP00048G00840 ... | 9 | |
Tree-based ortholog | 1-to-many | CP02279G00010 CP00201G00050 CP02196G00020 ... | 4 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CP00201G00010 | 1 | ||
Chlamydomonas reinhardtii | Tree-based ortholog | 1-to-many | CR03G10280 CR03G10260 | 2 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | CR03G10260 CR03G10280 | 2 | ||
Citrullus lanatus | Orthologous gene family | many-to-many | CL01G02130 CL02G20690 CL06G16210 ... | 5 | |
Tree-based ortholog | 1-to-many | CL01G02130 CL07G09070 | 2 | ||
Anchor point | 1-to-1 | CL01G02130 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CL01G02130 | 1 | ||
Citrus sinensis | Orthologous gene family | many-to-many | CS00009G01550 CS00013G01980 CS00014G01290 ... | 7 | |
Tree-based ortholog | 1-to-1 | CS00009G01550 | 1 | ||
Anchor point | 1-to-1 | CS00009G01550 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CS00009G01550 | 1 | ||
Cucumis melo | Orthologous gene family | many-to-many | CM00005G06920 CM00005G06930 CM00025G00920 ... | 7 | |
Tree-based ortholog | 1-to-many | CM00005G06920 CM00005G06930 CM00027G02790 | 3 | ||
Anchor point | 1-to-many | CM00005G06920 CM00027G02790 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CM00025G00920 | 1 | ||
Eucalyptus grandis | Orthologous gene family | many-to-many | EG0003G06280 EG0005G06630 EG0006G20400 ... | 7 | |
Tree-based ortholog | 1-to-1 | EG0005G06630 | 1 | ||
Anchor point | 1-to-1 | EG0005G06630 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | EG0005G06630 | 1 | ||
Fragaria vesca | Orthologous gene family | many-to-many | FV0G32610 FV1G10900 FV5G03740 ... | 6 | |
Tree-based ortholog | 1-to-1 | FV5G03740 | 1 | ||
Anchor point | 1-to-1 | FV5G03740 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | FV5G03740 | 1 | ||
Glycine max | Orthologous gene family | many-to-many | GM01G43190 GM03G39610 GM04G38040 ... | 19 | |
Tree-based ortholog | 1-to-many | GM11G02310 GM01G43190 GM08G02210 ... | 4 | ||
Anchor point | 1-to-many | GM11G02310 GM05G37330 GM01G43190 ... | 4 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | GM05G37330 GM08G02210 | 2 | ||
Gossypium raimondii | Orthologous gene family | many-to-many | GR01G01740 GR01G05330 GR01G10650 ... | 13 | |
Tree-based ortholog | 1-to-many | GR03G08510 GR04G13730 GR08G25050 | 3 | ||
Anchor point | 1-to-many | GR08G25050 GR04G13730 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | GR08G25050 | 1 | ||
Lotus japonicus | Orthologous gene family | many-to-many | LJ1G020110 LJ1G045790 LJ4G044660 ... | 9 | |
Tree-based ortholog | 1-to-1 | LJ6G015400 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | LJ6G015400 | 1 | ||
Malus domestica | Orthologous gene family | many-to-many | MD00G387530 MD01G008660 MD02G027650 ... | 13 | |
Tree-based ortholog | 1-to-many | MD01G008660 MD02G027660 MD02G027650 | 3 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | MD04G005460 | 1 | ||
Manihot esculenta | Orthologous gene family | many-to-many | ME00506G00270 ME00620G00120 ME01701G00960 ... | 9 | |
Tree-based ortholog | 1-to-many | ME11428G00010 ME05280G00800 | 2 | ||
Anchor point | 1-to-1 | ME05280G00800 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ME05280G00800 | 1 | ||
Medicago truncatula | Orthologous gene family | many-to-many | MT1G083290 MT2G043900 MT3G098320 ... | 10 | |
Tree-based ortholog | 1-to-many | MT8G099030 MT1G113980 | 2 | ||
Anchor point | 1-to-1 | MT8G099030 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | MT8G099030 | 1 | ||
Oryza sativa ssp. japonica | Orthologous gene family | many-to-many | OS01G25820 OS01G53294 OS01G61880 ... | 9 | |
Tree-based ortholog | 1-to-many | OS05G45210 OS01G53294 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OS05G45210 | 1 | ||
Ostreococcus lucimarinus | Orthologous gene family | many-to-1 | OL16G00340 | 1 | |
Tree-based ortholog | 1-to-1 | OL16G00340 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OL16G00340 | 1 | ||
Physcomitrella patens | Orthologous gene family | many-to-many | PP00010G00120 PP00018G00970 PP00032G00240 ... | 4 | |
Tree-based ortholog | 1-to-many | PP00032G00240 PP00241G00210 PP00010G00120 ... | 5 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PP00241G00210 PP00010G00120 PP00032G00240 ... | 4 | ||
Populus trichocarpa | Orthologous gene family | many-to-many | PT01G07090 PT01G09830 PT03G13330 ... | 10 | |
Tree-based ortholog | 1-to-many | PT01G09830 PT03G13330 | 2 | ||
Anchor point | 1-to-many | PT03G13330 PT01G09830 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PT03G13330 PT01G09830 | 2 | ||
Prunus persica | Orthologous gene family | many-to-many | PPE_001G21860 PPE_005G14600 PPE_005G20830 ... | 6 | |
Tree-based ortholog | 1-to-1 | PPE_005G11580 | 1 | ||
Anchor point | 1-to-1 | PPE_005G11580 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PPE_005G11580 | 1 | ||
Ricinus communis | Orthologous gene family | many-to-many | RC29739G01400 RC29941G00030 RC30039G00130 ... | 7 | |
Tree-based ortholog | 1-to-1 | RC30190G04530 | 1 | ||
Anchor point | 1-to-1 | RC30190G04530 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | RC30190G04530 | 1 | ||
Solanum lycopersicum | Orthologous gene family | many-to-many | SL01G099620 SL03G117980 SL05G025680 ... | 8 | |
Tree-based ortholog | 1-to-1 | SL08G081690 | 1 | ||
Anchor point | 1-to-1 | SL08G081690 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | SL08G081690 | 1 | ||
Solanum tuberosum | Orthologous gene family | many-to-many | ST01G037380 ST03G031420 ST05G016960 ... | 9 | |
Tree-based ortholog | 1-to-1 | ST08G028720 | 1 | ||
Anchor point | 1-to-1 | ST08G028720 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ST08G028720 | 1 | ||
Thellungiella parvula | Orthologous gene family | many-to-many | TP1G07690 TP1G17140 TP2G00650 ... | 10 | |
Tree-based ortholog | 1-to-1 | TP6G06210 | 1 | ||
Anchor point | 1-to-many | TP2G00650 TP6G06210 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TP6G06210 | 1 | ||
Theobroma cacao | Orthologous gene family | many-to-many | TC0003G10510 TC0003G14530 TC0003G28290 ... | 7 | |
Tree-based ortholog | 1-to-1 | TC0003G28290 | 1 | ||
Anchor point | 1-to-1 | TC0003G28290 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TC0003G28290 | 1 | ||
Vitis vinifera | Orthologous gene family | many-to-many | VV01G01480 VV01G01490 VV02G03780 ... | 7 | |
Tree-based ortholog | 1-to-many | VV03G07120 VV02G03780 | 2 | ||
Anchor point | 1-to-1 | VV02G03780 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | VV02G03780 | 1 | ||
Zea mays | Orthologous gene family | many-to-many | ZM01G20940 ZM01G37420 ZM02G42940 ... | 16 | |
Tree-based ortholog | 1-to-many | ZM06G29020 ZM03G32550 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ZM06G29020 | 1 |