Integrative Orthology Viewer: AL6G17670 (Arabidopsis lyrata)
Inparalogs
Organism | Source | Genes | #genes | Details |
---|---|---|---|---|
Arabidopsis lyrata | Orthologous gene family | AL6G17670 AL6G17690 | 2 | |
Tree-based ortholog | AL6G17690 AL6G17670 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | AL6G17670 | 1 |
Orthologs
Organism | Source | Type | Genes | #genes | Details |
---|---|---|---|---|---|
Amborella trichopoda | Tree-based ortholog | many-to-many | ATR_00006G02930 ATR_00019G03690 ATR_00019G03660 ... | 9 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | ATR_00014G00400 ATR_00036G00850 ATR_00014G01090 | 3 | ||
Arabidopsis thaliana | Orthologous gene family | many-to-many | AT5G17730 AT5G17740 AT5G17760 | 3 | |
Tree-based ortholog | many-to-1 | AT5G17760 | 1 | ||
Anchor point | N/A | AT5G17730 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AT5G17730 | 1 | ||
Beta vulgaris | Tree-based ortholog | many-to-1 | BV6G16030 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BV6G16030 | 1 | ||
Brassica rapa | Orthologous gene family | many-to-many | BR02G08610 BR03G07570 BR10G16780 | 3 | |
Tree-based ortholog | many-to-many | BR10G16780 BR03G07570 | 2 | ||
Anchor point | N/A | BR02G08610 BR10G16780 BR03G07570 | 3 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BR10G16780 | 1 | ||
Capsella rubella | Orthologous gene family | many-to-many | CRU_006G15600 CRU_006G15610 CRU_006G15620 | 3 | |
Tree-based ortholog | many-to-1 | CRU_006G15620 | 1 | ||
Anchor point | N/A | CRU_006G15590 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CRU_006G15600 | 1 | ||
Carica papaya | Tree-based ortholog | many-to-1 | CP00006G01650 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CP00006G01650 | 1 | ||
Chlamydomonas reinhardtii | Tree-based ortholog | many-to-1 | CR05G02940 | 1 | |
Citrullus lanatus | Tree-based ortholog | many-to-1 | CL07G10040 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CL07G10040 | 1 | ||
Citrus sinensis | Tree-based ortholog | many-to-1 | CS00017G00260 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CS00017G00260 | 1 | ||
Cucumis melo | Tree-based ortholog | many-to-1 | CM00027G03450 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CM00027G03450 | 1 | ||
Eucalyptus grandis | Tree-based ortholog | many-to-1 | EG0006G12880 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | EG0417G00010 EG0009G20290 EG0009G20300 | 3 | ||
Fragaria vesca | Tree-based ortholog | many-to-1 | FV1G14910 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | FV1G14010 FV1G14760 FV1G14890 ... | 4 | ||
Glycine max | Tree-based ortholog | many-to-many | GM16G24690 GM02G06010 GM01G37670 ... | 4 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | GM11G07620 GM01G37670 | 2 | ||
Gossypium raimondii | Tree-based ortholog | many-to-1 | GR03G01310 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | GR03G01310 | 1 | ||
Lotus japonicus | Tree-based ortholog | many-to-1 | LJ2G030240 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | LJ2G030240 | 1 | ||
Malus domestica | Tree-based ortholog | many-to-1 | MD00G122330 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | MD00G122330 | 1 | ||
Manihot esculenta | Tree-based ortholog | many-to-1 | ME07520G01980 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ME07520G01980 | 1 | ||
Medicago truncatula | Tree-based ortholog | many-to-1 | MT5G020980 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | MT5G020980 | 1 | ||
Oryza sativa ssp. japonica | Tree-based ortholog | many-to-1 | OS07G33380 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | OS01G42030 OS05G51130 | 2 | ||
Ostreococcus lucimarinus | Tree-based ortholog | many-to-1 | OL07G00550 | 1 | |
Physcomitrella patens | Tree-based ortholog | many-to-many | PP00059G01890 PP00150G00440 PP00286G00310 ... | 8 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PP00300G00140 | 1 | ||
Populus trichocarpa | Tree-based ortholog | many-to-many | PT07G02080 PT05G11990 | 2 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PT07G02080 PT05G11990 | 2 | ||
Prunus persica | Tree-based ortholog | many-to-1 | PPE_007G17970 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PPE_007G17970 | 1 | ||
Ricinus communis | Tree-based ortholog | many-to-many | RC29634G00360 RC29634G00350 RC29634G00320 ... | 4 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | RC29929G01820 | 1 | ||
Solanum lycopersicum | Tree-based ortholog | many-to-1 | SL02G084910 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | SL02G084910 | 1 | ||
Solanum tuberosum | Tree-based ortholog | many-to-1 | ST02G028050 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ST02G028030 | 1 | ||
Thellungiella parvula | Orthologous gene family | many-to-1 | TP6G26490 | 1 | |
Tree-based ortholog | many-to-1 | TP6G26490 | 1 | ||
Anchor point | N/A | TP6G26490 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TP6G26490 | 1 | ||
Theobroma cacao | Tree-based ortholog | many-to-1 | TC0001G02760 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TC0001G02760 | 1 | ||
Vitis vinifera | Tree-based ortholog | many-to-many | VV01G04080 VV01G04070 VV01G04060 ... | 6 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | VV01G03930 VV01G04080 VV01G04070 | 3 | ||
Zea mays | Tree-based ortholog | many-to-many | ZM05G14420 ZM05G14400 ZM02G45950 ... | 16 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ZM03G39330 | 1 |