Expansion plot
Gene family finder
Ks-graphs
Skyline plot
Synteny plot
WGDotplot
Functional clusters
WGMapping
BLAST
Workbench
Integrative Orthology Viewer:
AL6G15040
(Arabidopsis lyrata)
Inparalogs
| Organism | Source | Genes | #genes | Details |
|---|---|---|---|---|
| Arabidopsis lyrata | Orthologous gene family | AL6G15040 | 1 |  |
| Tree-based ortholog | AL6G15040 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | AL6G15040 | 1 |
Orthologs
| Organism | Source | Type | Genes | #genes | Details |
|---|---|---|---|---|---|
| Amborella trichopoda | Tree-based ortholog | 1-to-1 | ATR_00010G04510 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ATR_00010G04510 | 1 | ||
| Arabidopsis thaliana | Orthologous gene family | 1-to-1 | AT5G15210 | 1 | |
| Tree-based ortholog | 1-to-1 | AT5G15210 | 1 | ||
| Anchor point | N/A | AT5G39760 AT1G69600 AT5G15210 | 3 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AT5G15210 | 1 | ||
| Beta vulgaris | Tree-based ortholog | 1-to-1 | BV0G24260 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BV0G24260 | 1 | ||
| Brassica rapa | Orthologous gene family | 1-to-1 | BR10G19780 | 1 | |
| Tree-based ortholog | 1-to-1 | BR10G19780 | 1 | ||
| Anchor point | N/A | BR02G19910 BR10G19780 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BR10G19780 | 1 | ||
| Capsella rubella | Orthologous gene family | 1-to-1 | CRU_006G13070 | 1 | |
| Tree-based ortholog | 1-to-1 | CRU_006G13070 | 1 | ||
| Anchor point | N/A | CRU_007G34690 CRU_006G13070 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CRU_006G13070 | 1 | ||
| Carica papaya | Tree-based ortholog | 1-to-1 | CP00140G00530 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CP00140G00530 | 1 | ||
| Citrullus lanatus | Tree-based ortholog | 1-to-1 | CL10G13140 | 1 | |
| Anchor point | N/A | CL10G13140 CL09G18710 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CL10G13140 | 1 | ||
| Citrus sinensis | Tree-based ortholog | 1-to-1 | CS00003G04300 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CS00015G01680 | 1 | ||
| Cucumis melo | Tree-based ortholog | 1-to-1 | CM00011G08200 | 1 | |
| Anchor point | N/A | CM00016G04190 CM00011G08200 CM00051G00280 | 3 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CM00011G08200 | 1 | ||
| Eucalyptus grandis | Tree-based ortholog | 1-to-many | EG0007G00510 EG0009G00200 | 2 | |
| Anchor point | N/A | EG0011G20580 EG0009G16300 EG0010G11820 | 3 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | EG0009G20590 | 1 | ||
| Fragaria vesca | Tree-based ortholog | 1-to-1 | FV6G44540 | 1 | |
| Anchor point | N/A | FV6G44540 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | FV6G44540 | 1 | ||
| Glycine max | Tree-based ortholog | 1-to-many | GM18G49390 GM09G37300 GM13G05420 | 3 | |
| Anchor point | N/A | GM09G37300 GM13G05380 GM19G02610 | 3 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | GM13G05420 | 1 | ||
| Gossypium raimondii | Tree-based ortholog | 1-to-many | GR12G05430 GR06G01720 | 2 | |
| Anchor point | N/A | GR13G08550 GR12G05430 GR06G01720 | 3 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | GR06G01720 | 1 | ||
| Lotus japonicus | Tree-based ortholog | 1-to-1 | LJ2G017160 | 1 | |
| Anchor point | N/A | LJ2G017150 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | LJ2G017160 | 1 | ||
| Malus domestica | Tree-based ortholog | 1-to-1 | MD09G003660 | 1 | |
| Anchor point | N/A | MD09G003650 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | MD09G003660 | 1 | ||
| Manihot esculenta | Tree-based ortholog | 1-to-many | ME11495G00260 ME03834G00050 | 2 | |
| Anchor point | N/A | ME11341G00710 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ME11341G00720 | 1 | ||
| Medicago truncatula | Tree-based ortholog | 1-to-1 | MT7G010300 | 1 | |
| Anchor point | N/A | MT6G012220 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | MT7G010300 | 1 | ||
| Oryza sativa ssp. japonica | Tree-based ortholog | 1-to-1 | OS06G23030 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | OS08G37400 OS09G29130 | 2 | ||
| Physcomitrella patens | Tree-based ortholog | 1-to-many | PP00230G00360 PP00165G00520 PP00153G00520 ... | 7 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PP00165G00520 PP00003G02180 PP00235G00550 ... | 6 | ||
| Populus trichocarpa | Tree-based ortholog | 1-to-many | PT08G08600 PT10G16940 | 2 | |
| Anchor point | N/A | PT17G08270 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PT04G12650 PT17G08290 | 2 | ||
| Prunus persica | Tree-based ortholog | 1-to-1 | PPE_003G24670 | 1 | |
| Anchor point | N/A | PPE_003G24670 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PPE_001G28600 | 1 | ||
| Ricinus communis | Tree-based ortholog | 1-to-1 | RC29813G00370 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | RC27895G00010 | 1 | ||
| Solanum lycopersicum | Tree-based ortholog | 1-to-many | SL02G067320 SL02G067310 | 2 | |
| Anchor point | N/A | SL02G067310 SL02G087970 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | SL02G067320 | 1 | ||
| Solanum tuberosum | Tree-based ortholog | 1-to-many | ST02G013180 ST02G013170 | 2 | |
| Anchor point | N/A | ST02G034890 ST02G013170 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ST02G013180 | 1 | ||
| Thellungiella parvula | Orthologous gene family | 1-to-1 | TP6G28860 | 1 | |
| Tree-based ortholog | 1-to-1 | TP6G28860 | 1 | ||
| Anchor point | N/A | TP7G02270 TP6G28860 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TP6G28860 | 1 | ||
| Theobroma cacao | Tree-based ortholog | 1-to-1 | TC0004G08590 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TC0002G34470 | 1 | ||
| Vitis vinifera | Tree-based ortholog | 1-to-1 | VV14G02170 | 1 | |
| Anchor point | N/A | VV14G02170 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | VV14G02170 | 1 | ||
| Zea mays | Tree-based ortholog | 1-to-many | ZM01G38100 ZM04G14390 ZM02G30620 ... | 4 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | ZM06G31980 ZM08G11300 | 2 |