Integrative Orthology Viewer: AL6G14200 (Arabidopsis lyrata)
Inparalogs
Organism | Source | Genes | #genes | Details |
---|---|---|---|---|
Arabidopsis lyrata | Orthologous gene family | AL1G28090 AL2G15850 AL3G00460 ... | 4 | |
Tree-based ortholog | AL6G14200 | 1 | ||
Anchor point | AL3G00460 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | AL6G14200 | 1 |
Orthologs
Organism | Source | Type | Genes | #genes | Details |
---|---|---|---|---|---|
Amborella trichopoda | Orthologous gene family | many-to-1 | ATR_00166G00420 | 1 | |
Tree-based ortholog | 1-to-many | ATR_00061G01340 ATR_00061G01330 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ATR_00166G00420 | 1 | ||
Arabidopsis thaliana | Orthologous gene family | many-to-many | AT1G67800 AT3G01650 AT5G14420 | 3 | |
Tree-based ortholog | 1-to-1 | AT5G14420 | 1 | ||
Anchor point | 1-to-many | AT5G14420 AT3G01650 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AT5G14420 | 1 | ||
Beta vulgaris | Orthologous gene family | many-to-many | BV6G00680 BV6G19660 | 2 | |
Tree-based ortholog | 1-to-1 | BV6G00680 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BV6G00680 | 1 | ||
Brassica rapa | Orthologous gene family | many-to-many | BR02G06920 BR03G05920 BR03G28440 ... | 7 | |
Tree-based ortholog | 1-to-many | BR03G05920 BR10G20240 | 2 | ||
Anchor point | 1-to-many | BR03G05920 BR03G28440 BR02G06920 ... | 4 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BR03G05920 | 1 | ||
Capsella rubella | Orthologous gene family | many-to-many | CRU_001G24540 CRU_002G13370 CRU_003G00390 ... | 4 | |
Tree-based ortholog | 1-to-1 | CRU_006G12310 | 1 | ||
Anchor point | 1-to-many | CRU_003G00390 CRU_006G12310 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CRU_006G12310 | 1 | ||
Carica papaya | Orthologous gene family | many-to-many | CP00004G00190 CP00033G00580 CP00130G00700 | 3 | |
Tree-based ortholog | 1-to-1 | CP00130G00700 | 1 | ||
Anchor point | 1-to-1 | CP00130G00700 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CP00130G00700 | 1 | ||
Chlamydomonas reinhardtii | Orthologous gene family | many-to-1 | CR09G01910 | 1 | |
Tree-based ortholog | 1-to-many | CR09G07310 CR09G01910 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CR09G01910 | 1 | ||
Citrullus lanatus | Orthologous gene family | many-to-many | CL00G00190 CL05G26940 CL09G19860 ... | 4 | |
Tree-based ortholog | 1-to-1 | CL10G11880 | 1 | ||
Anchor point | 1-to-many | CL09G19860 CL10G11880 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CL09G19860 | 1 | ||
Citrus sinensis | Orthologous gene family | many-to-many | CS00003G01580 CS00020G00540 CS00252G00130 | 3 | |
Tree-based ortholog | 1-to-1 | CS00252G00130 | 1 | ||
Anchor point | 1-to-1 | CS00252G00130 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CS00020G00540 | 1 | ||
Cucumis melo | Orthologous gene family | many-to-many | CM00016G02400 CM00048G01290 CM00089G01040 ... | 4 | |
Tree-based ortholog | 1-to-1 | CM00098G00180 | 1 | ||
Anchor point | 1-to-many | CM00098G00180 CM00048G01290 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CM00048G01290 | 1 | ||
Eucalyptus grandis | Orthologous gene family | many-to-many | EG0002G01460 EG0002G26770 EG0004G07580 ... | 6 | |
Tree-based ortholog | 1-to-1 | EG0009G14420 | 1 | ||
Anchor point | 1-to-many | EG0010G19640 EG0009G14420 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | EG0008G19770 | 1 | ||
Fragaria vesca | Orthologous gene family | many-to-many | FV0G11050 FV0G40170 FV5G08950 | 3 | |
Tree-based ortholog | 1-to-1 | FV0G40170 | 1 | ||
Anchor point | 1-to-1 | FV0G40170 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | FV5G08950 | 1 | ||
Glycine max | Orthologous gene family | many-to-many | GM04G36400 GM05G24230 GM05G30701 ... | 10 | |
Tree-based ortholog | 1-to-many | GM19G07140 GM05G24230 GM19G30421 ... | 5 | ||
Anchor point | 1-to-many | GM06G18500 GM16G07400 GM19G22800 | 3 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | GM19G07140 GM05G24230 | 2 | ||
Gossypium raimondii | Orthologous gene family | many-to-many | GR01G26680 GR05G17570 GR06G03490 ... | 6 | |
Tree-based ortholog | 1-to-many | GR01G26680 GR06G03490 GR12G06570 | 3 | ||
Anchor point | 1-to-many | GR06G03490 GR12G06570 GR01G26680 | 3 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | GR12G06570 | 1 | ||
Lotus japonicus | Orthologous gene family | many-to-1 | LJ3G013330 | 1 | |
Tree-based ortholog | 1-to-1 | LJ3G013330 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | LJ3G013330 | 1 | ||
Malus domestica | Orthologous gene family | many-to-many | MD00G270220 MD00G376510 MD06G013430 ... | 6 | |
Tree-based ortholog | 1-to-many | MD09G001530 MD00G270220 MD17G001390 | 3 | ||
Anchor point | 1-to-many | MD17G001390 MD09G001530 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | MD17G001390 MD09G001530 | 2 | ||
Manihot esculenta | Orthologous gene family | many-to-many | ME04137G00400 ME04175G00460 ME05335G00110 ... | 4 | |
Tree-based ortholog | 1-to-many | ME05335G00110 ME04137G00400 | 2 | ||
Anchor point | 1-to-many | ME05335G00110 ME04137G00400 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | ME05335G00110 ME04137G00400 | 2 | ||
Medicago truncatula | Orthologous gene family | many-to-many | MT3G075530 MT3G086520 MT6G021730 ... | 5 | |
Tree-based ortholog | 1-to-many | MT6G021730 MT7G033100 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | MT6G021730 | 1 | ||
Oryza sativa ssp. japonica | Orthologous gene family | many-to-many | OS01G68060 OS06G40650 OS08G38600 ... | 4 | |
Tree-based ortholog | 1-to-many | OS01G68060 OS12G19030 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OS12G19030 | 1 | ||
Physcomitrella patens | Orthologous gene family | many-to-many | PP00030G00480 PP00049G01060 PP00423G00120 | 3 | |
Tree-based ortholog | 1-to-many | PP00388G00050 PP00423G00120 PP00049G01060 ... | 4 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PP00423G00120 PP00030G00480 | 2 | ||
Populus trichocarpa | Orthologous gene family | many-to-many | PT01G34220 PT06G00260 PT08G18360 ... | 7 | |
Tree-based ortholog | 1-to-1 | PT01G34220 | 1 | ||
Anchor point | 1-to-1 | PT01G34220 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PT01G34220 | 1 | ||
Prunus persica | Orthologous gene family | many-to-many | PPE_001G25240 PPE_003G27200 PPE_005G16960 | 3 | |
Tree-based ortholog | 1-to-1 | PPE_003G27200 | 1 | ||
Anchor point | 1-to-1 | PPE_003G27200 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PPE_005G16960 | 1 | ||
Ricinus communis | Orthologous gene family | many-to-many | RC29633G00530 RC29836G00220 RC29929G02950 ... | 4 | |
Tree-based ortholog | 1-to-1 | RC29633G00530 | 1 | ||
Anchor point | 1-to-1 | RC29633G00530 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | RC29633G00530 | 1 | ||
Solanum lycopersicum | Orthologous gene family | many-to-many | SL02G093520 SL03G111870 | 2 | |
Tree-based ortholog | 1-to-1 | SL02G093520 | 1 | ||
Anchor point | 1-to-1 | SL02G093520 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | SL02G093520 | 1 | ||
Solanum tuberosum | Orthologous gene family | many-to-many | ST02G036690 ST03G023140 | 2 | |
Tree-based ortholog | 1-to-1 | ST02G036690 | 1 | ||
Anchor point | 1-to-1 | ST02G036690 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ST03G023140 | 1 | ||
Thellungiella parvula | Orthologous gene family | many-to-many | TP1G23240 TP3G00400 TP5G22810 ... | 4 | |
Tree-based ortholog | 1-to-1 | TP6G29600 | 1 | ||
Anchor point | 1-to-many | TP3G00400 TP6G29600 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TP6G29600 | 1 | ||
Theobroma cacao | Orthologous gene family | many-to-many | TC0002G26520 TC0003G12070 TC0004G02080 | 3 | |
Tree-based ortholog | 1-to-1 | TC0004G02080 | 1 | ||
Anchor point | 1-to-1 | TC0004G02080 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TC0004G02080 | 1 | ||
Vitis vinifera | Orthologous gene family | many-to-many | VV00G03430 VV01G00310 VV14G10820 ... | 4 | |
Tree-based ortholog | 1-to-1 | VV14G10820 | 1 | ||
Anchor point | 1-to-1 | VV14G10820 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | VV14G10820 | 1 | ||
Zea mays | Orthologous gene family | many-to-many | ZM03G15160 ZM03G23550 ZM06G13630 ... | 5 | |
Tree-based ortholog | 1-to-many | ZM03G23550 ZM08G29600 ZM04G01680 ... | 4 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ZM03G15160 | 1 |