Integrative Orthology Viewer: AL6G07560 (Arabidopsis lyrata)
Inparalogs
Organism | Source | Genes | #genes | Details |
---|---|---|---|---|
Arabidopsis lyrata | Orthologous gene family | AL6G07550 AL6G07560 AL8G07990 | 3 | |
Tree-based ortholog | AL6G07560 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | AL6G07560 | 1 |
Orthologs
Organism | Source | Type | Genes | #genes | Details |
---|---|---|---|---|---|
Amborella trichopoda | Orthologous gene family | many-to-many | ATR_00035G00400 ATR_00035G00470 | 2 | |
Tree-based ortholog | 1-to-many | ATR_00009G01680 ATR_00029G03400 ATR_00035G00260 ... | 9 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | ATR_00035G00470 ATR_00035G00260 | 2 | ||
Arabidopsis thaliana | Orthologous gene family | many-to-many | AT5G07850 AT5G07860 AT5G07870 ... | 4 | |
Tree-based ortholog | 1-to-1 | AT5G07870 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AT5G07870 | 1 | ||
Beta vulgaris | Orthologous gene family | many-to-many | BV0G34540 BV0G66560 BV5G17940 ... | 5 | |
Tree-based ortholog | 1-to-many | BV0G33190 BV0G33200 BV0G54980 ... | 16 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | BV5G17950 BV0G66560 BV5G17970 | 3 | ||
Brassica rapa | Orthologous gene family | many-to-many | BR00G10090 BR02G04840 BR02G04850 | 3 | |
Tree-based ortholog | 1-to-1 | BR02G04840 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BR02G04840 | 1 | ||
Capsella rubella | Orthologous gene family | many-to-many | CRU_006G06630 CRU_008G05980 | 2 | |
Tree-based ortholog | 1-to-1 | CRU_006G06630 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CRU_006G06630 | 1 | ||
Carica papaya | Orthologous gene family | many-to-1 | CP00021G01690 | 1 | |
Tree-based ortholog | 1-to-1 | CP00021G01690 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CP00021G01690 | 1 | ||
Citrullus lanatus | Orthologous gene family | many-to-many | CL05G21210 CL05G21220 CL05G21230 ... | 5 | |
Tree-based ortholog | 1-to-many | CL05G21260 CL05G21240 CL05G21230 ... | 4 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CL05G21240 | 1 | ||
Citrus sinensis | Orthologous gene family | many-to-1 | CS00002G02690 | 1 | |
Tree-based ortholog | 1-to-1 | CS00002G02690 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CS00002G02690 | 1 | ||
Cucumis melo | Orthologous gene family | many-to-many | CM00029G01430 CM00029G01440 CM00029G01450 ... | 6 | |
Tree-based ortholog | 1-to-many | CM00029G01460 CM00029G01480 CM00029G01450 ... | 4 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CM00029G01450 | 1 | ||
Eucalyptus grandis | Orthologous gene family | many-to-many | EG0006G01700 EG0006G01710 EG0006G01730 ... | 6 | |
Tree-based ortholog | 1-to-many | EG0006G01750 EG0006G01740 EG0006G01700 ... | 8 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | EG0006G01750 EG0006G01770 EG0006G01700 ... | 6 | ||
Fragaria vesca | Orthologous gene family | many-to-many | FV2G33520 FV2G33550 FV2G33560 | 3 | |
Tree-based ortholog | 1-to-many | FV2G33520 FV2G33550 FV2G33560 | 3 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | FV2G33560 FV2G33550 FV2G33520 | 3 | ||
Glycine max | Orthologous gene family | many-to-many | GM04G04230 GM04G04240 GM04G04250 ... | 10 | |
Tree-based ortholog | 1-to-many | GM08G00600 GM04G04250 GM04G04230 ... | 12 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | GM04G06150 GM04G04250 GM06G04430 ... | 8 | ||
Gossypium raimondii | Orthologous gene family | many-to-many | GR10G02100 GR10G02120 GR10G02130 ... | 5 | |
Tree-based ortholog | 1-to-many | GR10G02140 GR10G02130 GR10G02170 ... | 5 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | GR10G02170 GR10G02140 GR10G02130 | 3 | ||
Lotus japonicus | Orthologous gene family | many-to-1 | LJ6G003300 | 1 | |
Tree-based ortholog | 1-to-1 | LJ6G003300 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | LJ6G003300 | 1 | ||
Malus domestica | Orthologous gene family | many-to-many | MD00G192040 MD00G469460 MD08G010860 ... | 5 | |
Tree-based ortholog | 1-to-many | MD00G469460 MD08G010860 MD08G010900 ... | 7 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | MD15G002630 MD00G192040 | 2 | ||
Manihot esculenta | Orthologous gene family | many-to-1 | ME03484G00250 | 1 | |
Tree-based ortholog | 1-to-1 | ME03484G00250 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ME03484G00250 | 1 | ||
Medicago truncatula | Orthologous gene family | many-to-many | MT3G101900 MT3G101930 MT3G101960 ... | 7 | |
Tree-based ortholog | 1-to-many | MT3G101970 MT3G101960 MT3G102010 ... | 7 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | MT3G101960 MT3G102010 MT3G102020 ... | 4 | ||
Oryza sativa ssp. japonica | Orthologous gene family | many-to-many | OS06G01350 OS07G04970 OS11G13970 | 3 | |
Tree-based ortholog | 1-to-many | OS08G44840 OS01G63480 OS05G37660 ... | 13 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | OS11G13970 OS06G01350 | 2 | ||
Physcomitrella patens | Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PP00465G00160 PP00015G01970 | 2 | |
Populus trichocarpa | Orthologous gene family | many-to-many | PT00G12590 PT14G02550 PT14G02560 | 3 | |
Tree-based ortholog | 1-to-many | PT14G02560 PT00G12590 PT14G02550 | 3 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PT00G12590 PT14G02560 PT14G02550 | 3 | ||
Prunus persica | Orthologous gene family | many-to-many | PPE_001G43740 PPE_001G43750 PPE_001G43760 | 3 | |
Tree-based ortholog | 1-to-many | PPE_001G43760 PPE_001G43740 PPE_001G43750 | 3 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PPE_001G43750 PPE_001G43740 | 2 | ||
Ricinus communis | Orthologous gene family | many-to-1 | RC30170G01940 | 1 | |
Tree-based ortholog | 1-to-1 | RC30170G01940 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | RC30170G01940 | 1 | ||
Solanum lycopersicum | Orthologous gene family | many-to-1 | SL04G078660 | 1 | |
Tree-based ortholog | 1-to-many | SL04G078350 SL04G078660 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | SL04G078660 | 1 | ||
Solanum tuberosum | Orthologous gene family | many-to-1 | ST04G031310 | 1 | |
Tree-based ortholog | 1-to-many | ST04G031310 ST04G031600 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ST04G031310 | 1 | ||
Thellungiella parvula | Orthologous gene family | many-to-many | TP2G07540 TP6G35080 TP6G35090 | 3 | |
Tree-based ortholog | 1-to-1 | TP6G35080 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TP6G35080 | 1 | ||
Theobroma cacao | Orthologous gene family | many-to-1 | TC0008G00350 | 1 | |
Tree-based ortholog | 1-to-1 | TC0008G00360 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TC0008G00350 | 1 | ||
Vitis vinifera | Tree-based ortholog | 1-to-many | VV18G06870 VV18G06840 | 2 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | VV08G13230 | 1 | ||
Zea mays | Orthologous gene family | many-to-many | ZM06G00740 ZM06G06510 | 2 | |
Tree-based ortholog | 1-to-many | ZM08G31390 ZM03G26650 ZM08G14410 ... | 7 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ZM06G06510 | 1 |