Expansion plot
Gene family finder
Ks-graphs
Skyline plot
Synteny plot
WGDotplot
Functional clusters
WGMapping
BLAST
Workbench
Integrative Orthology Viewer:
AL6G02280
(Arabidopsis lyrata)
Inparalogs
| Organism | Source | Genes | #genes | Details |
|---|---|---|---|---|
| Arabidopsis lyrata | Orthologous gene family | AL6G02280 | 1 |  |
| Tree-based ortholog | AL6G02280 | 1 | ||
| Anchor point | AL3G09970 AL8G26720 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | AL6G02280 | 1 |
Orthologs
| Organism | Source | Type | Genes | #genes | Details |
|---|---|---|---|---|---|
| Amborella trichopoda | Tree-based ortholog | 1-to-1 | ATR_00175G00230 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ATR_00175G00230 | 1 | ||
| Arabidopsis thaliana | Tree-based ortholog | 1-to-1 | AT5G03180 | 1 | |
| Anchor point | many-to-many | AT3G09760 AT5G03180 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AT5G03180 | 1 | ||
| Beta vulgaris | Tree-based ortholog | 1-to-1 | BV7G14150 | 1 | |
| Anchor point | many-to-1 | BV7G14150 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BV7G14150 | 1 | ||
| Brassica rapa | Tree-based ortholog | 1-to-1 | BR02G03200 | 1 | |
| Anchor point | many-to-many | BR02G03200 BR05G32510 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BR05G32510 | 1 | ||
| Capsella rubella | Tree-based ortholog | 1-to-1 | CRU_006G01990 | 1 | |
| Anchor point | many-to-many | CRU_006G01990 CRU_008G20650 CRU_003G08470 | 3 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CRU_006G01990 | 1 | ||
| Carica papaya | Tree-based ortholog | 1-to-1 | CP00226G00050 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CP00226G00050 | 1 | ||
| Chlamydomonas reinhardtii | Tree-based ortholog | 1-to-1 | CR02G07720 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CR02G07720 | 1 | ||
| Citrullus lanatus | Tree-based ortholog | 1-to-1 | CL10G18370 | 1 | |
| Anchor point | many-to-many | CL10G18370 CL02G21250 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CL03G02230 | 1 | ||
| Citrus sinensis | Tree-based ortholog | 1-to-1 | CS00446G00030 | 1 | |
| Anchor point | many-to-1 | CS00014G02130 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CS00446G00030 | 1 | ||
| Cucumis melo | Tree-based ortholog | 1-to-1 | CM00011G02600 | 1 | |
| Anchor point | many-to-many | CM00011G02600 CM00004G04120 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CM00004G04120 | 1 | ||
| Eucalyptus grandis | Tree-based ortholog | 1-to-1 | EG0011G27290 | 1 | |
| Anchor point | many-to-many | EG0002G20090 EG0011G27290 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | EG0011G27290 | 1 | ||
| Fragaria vesca | Tree-based ortholog | 1-to-1 | FV6G48600 | 1 | |
| Anchor point | many-to-1 | FV6G48600 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | FV6G48600 | 1 | ||
| Glycine max | Tree-based ortholog | 1-to-many | GM19G36490 GM03G33750 GM13G20250 ... | 4 | |
| Anchor point | many-to-many | GM13G40150 GM10G05910 GM19G36490 ... | 5 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | GM10G05910 GM13G20250 | 2 | ||
| Gossypium raimondii | Tree-based ortholog | 1-to-1 | GR02G24860 | 1 | |
| Anchor point | many-to-1 | GR02G24860 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | GR02G24860 | 1 | ||
| Lotus japonicus | Tree-based ortholog | 1-to-1 | LJ5G010740 | 1 | |
| Anchor point | many-to-1 | LJ5G010740 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | LJ5G010740 | 1 | ||
| Malus domestica | Tree-based ortholog | 1-to-many | MD04G007380 MD04G007360 MD12G011090 | 3 | |
| Anchor point | many-to-many | MD12G011090 MD04G007360 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | MD04G007380 MD04G007360 | 2 | ||
| Manihot esculenta | Tree-based ortholog | 1-to-1 | ME02960G00630 | 1 | |
| Anchor point | many-to-1 | ME02960G00630 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ME02960G00630 | 1 | ||
| Medicago truncatula | Tree-based ortholog | 1-to-1 | MT1G064710 | 1 | |
| Anchor point | many-to-1 | MT1G064710 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | MT1G064710 | 1 | ||
| Oryza sativa ssp. japonica | Tree-based ortholog | 1-to-many | OS06G23274 OS04G01490 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OS06G46366 | 1 | ||
| Ostreococcus lucimarinus | Tree-based ortholog | 1-to-1 | OL05G00750 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OL05G00750 | 1 | ||
| Physcomitrella patens | Tree-based ortholog | 1-to-many | PP00003G02540 PP00085G00710 PP00024G00860 | 3 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PP00024G00860 | 1 | ||
| Populus trichocarpa | Tree-based ortholog | 1-to-1 | PT06G12900 | 1 | |
| Anchor point | many-to-1 | PT06G12900 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PT06G12900 | 1 | ||
| Prunus persica | Tree-based ortholog | 1-to-1 | PPE_006G24630 | 1 | |
| Anchor point | many-to-1 | PPE_006G24630 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PPE_006G24630 | 1 | ||
| Ricinus communis | Tree-based ortholog | 1-to-1 | RC30078G01340 | 1 | |
| Anchor point | many-to-1 | RC30078G01340 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | RC30078G01340 | 1 | ||
| Solanum lycopersicum | Tree-based ortholog | 1-to-1 | SL09G007680 | 1 | |
| Anchor point | many-to-1 | SL09G007680 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | SL11G069350 | 1 | ||
| Solanum tuberosum | Tree-based ortholog | 1-to-1 | ST09G007310 | 1 | |
| Anchor point | many-to-1 | ST09G007300 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ST11G026210 | 1 | ||
| Thellungiella parvula | Tree-based ortholog | 1-to-1 | TP6G39540 | 1 | |
| Anchor point | many-to-many | TP6G39540 TP6G22150 TP3G08100 | 3 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TP6G39540 | 1 | ||
| Theobroma cacao | Tree-based ortholog | 1-to-1 | TC0005G05550 | 1 | |
| Anchor point | many-to-1 | TC0005G05550 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TC0005G05550 | 1 | ||
| Vitis vinifera | Tree-based ortholog | 1-to-1 | VV08G02780 | 1 | |
| Anchor point | many-to-1 | VV08G02780 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | VV08G02780 | 1 | ||
| Zea mays | Tree-based ortholog | 1-to-many | ZM05G31240 ZM10G13190 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ZM05G12660 | 1 |