Expansion plot
Gene family finder
Ks-graphs
Skyline plot
Synteny plot
WGDotplot
Functional clusters
WGMapping
BLAST
Workbench
Integrative Orthology Viewer:
AL5G34660
(Arabidopsis lyrata)
Inparalogs
| Organism | Source | Genes | #genes | Details |
|---|---|---|---|---|
| Arabidopsis lyrata | Orthologous gene family | AL5G34660 | 1 |  |
| Tree-based ortholog | AL5G34660 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | AL5G34660 | 1 |
Orthologs
| Organism | Source | Type | Genes | #genes | Details |
|---|---|---|---|---|---|
| Amborella trichopoda | Orthologous gene family | 1-to-1 | ATR_00103G00700 | 1 | |
| Tree-based ortholog | 1-to-1 | ATR_00103G00700 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ATR_00103G00700 | 1 | ||
| Arabidopsis thaliana | Orthologous gene family | 1-to-1 | AT3G63510 | 1 | |
| Tree-based ortholog | 1-to-1 | AT3G63510 | 1 | ||
| Anchor point | N/A | AT3G63510 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AT3G63510 | 1 | ||
| Beta vulgaris | Orthologous gene family | 1-to-1 | BV2G09480 | 1 | |
| Tree-based ortholog | 1-to-many | BV2G09480 BV2G09450 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BV2G09480 | 1 | ||
| Brassica rapa | Orthologous gene family | 1-to-many | BR06G30400 BR07G27650 | 2 | |
| Tree-based ortholog | 1-to-1 | BR07G27650 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BR07G27650 | 1 | ||
| Capsella rubella | Orthologous gene family | 1-to-1 | CRU_008G07390 | 1 | |
| Tree-based ortholog | 1-to-1 | CRU_005G28620 | 1 | ||
| Anchor point | N/A | CRU_005G28620 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CRU_008G07390 | 1 | ||
| Carica papaya | Orthologous gene family | 1-to-1 | CP00125G00120 | 1 | |
| Tree-based ortholog | 1-to-many | CP00125G00120 CP00125G00170 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CP00125G00120 | 1 | ||
| Chlamydomonas reinhardtii | Orthologous gene family | 1-to-1 | CR15G00640 | 1 | |
| Tree-based ortholog | 1-to-1 | CR15G00640 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CR15G00640 | 1 | ||
| Citrullus lanatus | Orthologous gene family | 1-to-1 | CL10G10520 | 1 | |
| Tree-based ortholog | 1-to-many | CL10G10520 CL10G10500 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CL10G10520 | 1 | ||
| Citrus sinensis | Orthologous gene family | 1-to-1 | CS00003G06510 | 1 | |
| Tree-based ortholog | 1-to-many | CS00003G06570 CS00003G06510 | 2 | ||
| Anchor point | N/A | CS00003G06510 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CS00003G06510 | 1 | ||
| Cucumis melo | Orthologous gene family | 1-to-1 | CM00064G00670 | 1 | |
| Tree-based ortholog | 1-to-many | CM00064G00670 CM00064G00690 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CM00064G00670 | 1 | ||
| Eucalyptus grandis | Orthologous gene family | 1-to-1 | EG0010G10710 | 1 | |
| Tree-based ortholog | 1-to-many | EG0010G10710 EG0007G27130 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | EG0010G10710 | 1 | ||
| Fragaria vesca | Orthologous gene family | 1-to-1 | FV7G02620 | 1 | |
| Tree-based ortholog | 1-to-many | FV7G02620 FV7G19820 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | FV7G02620 | 1 | ||
| Glycine max | Orthologous gene family | 1-to-many | GM05G26560 GM08G09540 GM10G11572 | 3 | |
| Tree-based ortholog | 1-to-many | GM12G01080 GM09G36250 GM05G26560 ... | 5 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | GM08G09540 | 1 | ||
| Gossypium raimondii | Orthologous gene family | 1-to-1 | GR04G17170 | 1 | |
| Tree-based ortholog | 1-to-many | GR07G23990 GR09G40070 GR04G17170 ... | 4 | ||
| Anchor point | N/A | GR04G17170 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | GR04G17170 | 1 | ||
| Lotus japonicus | Orthologous gene family | 1-to-1 | LJ3G051220 | 1 | |
| Tree-based ortholog | 1-to-many | LJ3G051150 LJ3G051220 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | LJ3G051220 | 1 | ||
| Malus domestica | Orthologous gene family | 1-to-1 | MD00G459210 | 1 | |
| Tree-based ortholog | 1-to-many | MD00G459210 MD02G029250 MD07G001020 ... | 10 | ||
| Anchor point | N/A | MD07G001020 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | MD02G029250 | 1 | ||
| Manihot esculenta | Orthologous gene family | 1-to-1 | ME06659G00090 | 1 | |
| Tree-based ortholog | 1-to-many | ME06659G00090 ME11106G00620 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ME06659G00090 | 1 | ||
| Medicago truncatula | Orthologous gene family | 1-to-many | MT3G030890 MT4G037515 | 2 | |
| Tree-based ortholog | 1-to-many | MT4G039430 MT4G037515 MT3G030890 | 3 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | MT3G030890 | 1 | ||
| Oryza sativa ssp. japonica | Orthologous gene family | 1-to-1 | OS04G20990 | 1 | |
| Tree-based ortholog | 1-to-1 | OS04G20990 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OS04G20990 | 1 | ||
| Ostreococcus lucimarinus | Orthologous gene family | 1-to-1 | OL08G03530 | 1 | |
| Tree-based ortholog | 1-to-many | OL08G03530 OL10G03370 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OL08G03530 | 1 | ||
| Physcomitrella patens | Orthologous gene family | 1-to-many | PP00002G01280 PP00652G00010 | 2 | |
| Tree-based ortholog | 1-to-many | PP00652G00010 PP00002G01280 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PP00652G00010 PP00002G01280 | 2 | ||
| Populus trichocarpa | Orthologous gene family | 1-to-many | PT01G26490 PT09G05990 | 2 | |
| Tree-based ortholog | 1-to-many | PT01G26440 PT09G05920 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PT01G26490 PT09G05990 | 2 | ||
| Prunus persica | Orthologous gene family | 1-to-1 | PPE_002G06940 | 1 | |
| Tree-based ortholog | 1-to-many | PPE_002G06940 PPE_002G06740 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PPE_002G06940 | 1 | ||
| Ricinus communis | Orthologous gene family | 1-to-1 | RC29864G00670 | 1 | |
| Tree-based ortholog | 1-to-many | RC29864G00670 RC29864G00590 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | RC29864G00670 | 1 | ||
| Solanum lycopersicum | Orthologous gene family | 1-to-many | SL01G087290 SL01G087300 | 2 | |
| Tree-based ortholog | 1-to-many | SL01G087290 SL01G087300 SL01G087470 | 3 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | SL01G087290 | 1 | ||
| Solanum tuberosum | Orthologous gene family | 1-to-many | ST01G026120 ST01G026130 | 2 | |
| Tree-based ortholog | 1-to-many | ST01G026130 ST01G026120 ST01G026040 ... | 4 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ST01G026130 | 1 | ||
| Thellungiella parvula | Orthologous gene family | 1-to-many | TP2G18450 TP5G26390 | 2 | |
| Tree-based ortholog | 1-to-1 | TP5G26390 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TP5G26390 | 1 | ||
| Theobroma cacao | Orthologous gene family | 1-to-1 | TC0001G40420 | 1 | |
| Tree-based ortholog | 1-to-many | TC0001G40420 TC0001G40340 TC0009G33880 | 3 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TC0001G40420 | 1 | ||
| Vitis vinifera | Orthologous gene family | 1-to-1 | VV13G08030 | 1 | |
| Tree-based ortholog | 1-to-1 | VV13G08100 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | VV13G08030 | 1 | ||
| Zea mays | Orthologous gene family | 1-to-1 | ZM02G19280 | 1 | |
| Tree-based ortholog | 1-to-1 | ZM02G19280 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ZM02G19280 | 1 |