Integrative Orthology Viewer: AL5G30120 (Arabidopsis lyrata)
Inparalogs
Organism | Source | Genes | #genes | Details |
---|---|---|---|---|
Arabidopsis lyrata | Orthologous gene family | AL1G49470 AL5G30120 | 2 | |
Tree-based ortholog | AL5G30120 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | AL5G30120 | 1 |
Orthologs
Organism | Source | Type | Genes | #genes | Details |
---|---|---|---|---|---|
Amborella trichopoda | Orthologous gene family | many-to-1 | ATR_00070G00030 | 1 | |
Tree-based ortholog | 1-to-1 | ATR_00070G00030 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ATR_00070G00030 | 1 | ||
Arabidopsis thaliana | Orthologous gene family | many-to-many | AT1G54250 AT3G59600 | 2 | |
Tree-based ortholog | 1-to-1 | AT3G59600 | 1 | ||
Anchor point | N/A | AT3G59600 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AT3G59600 | 1 | ||
Beta vulgaris | Orthologous gene family | many-to-1 | BV4G11570 | 1 | |
Tree-based ortholog | 1-to-1 | BV4G11570 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BV4G11570 | 1 | ||
Brassica rapa | Orthologous gene family | many-to-1 | BR09G39300 | 1 | |
Tree-based ortholog | 1-to-1 | BR09G39300 | 1 | ||
Anchor point | N/A | BR09G39300 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BR09G39300 | 1 | ||
Capsella rubella | Orthologous gene family | many-to-many | CRU_001G41430 CRU_005G24920 | 2 | |
Tree-based ortholog | 1-to-1 | CRU_005G24920 | 1 | ||
Anchor point | N/A | CRU_005G24920 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CRU_005G24920 | 1 | ||
Carica papaya | Orthologous gene family | many-to-1 | CP00009G03260 | 1 | |
Tree-based ortholog | 1-to-1 | CP00009G03260 | 1 | ||
Anchor point | N/A | CP00009G03260 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CP00009G03260 | 1 | ||
Chlamydomonas reinhardtii | Orthologous gene family | many-to-1 | CR02G07770 | 1 | |
Tree-based ortholog | 1-to-1 | CR02G07770 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CR02G07770 | 1 | ||
Citrullus lanatus | Orthologous gene family | many-to-1 | CL07G18200 | 1 | |
Tree-based ortholog | 1-to-1 | CL07G18200 | 1 | ||
Anchor point | N/A | CL07G18200 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CL07G18200 | 1 | ||
Citrus sinensis | Orthologous gene family | many-to-1 | CS00162G00140 | 1 | |
Tree-based ortholog | 1-to-1 | CS00162G00140 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CS00162G00140 | 1 | ||
Cucumis melo | Orthologous gene family | many-to-1 | CM00031G02470 | 1 | |
Tree-based ortholog | 1-to-1 | CM00031G02470 | 1 | ||
Anchor point | N/A | CM00031G02470 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CM00031G02470 | 1 | ||
Eucalyptus grandis | Orthologous gene family | many-to-many | EG0001G00180 EG0381G00010 | 2 | |
Tree-based ortholog | 1-to-many | EG0001G00180 EG0381G00010 EG0001G00230 | 3 | ||
Anchor point | N/A | EG0001G00180 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | EG0001G00180 EG0381G00010 | 2 | ||
Fragaria vesca | Orthologous gene family | many-to-1 | FV7G15200 | 1 | |
Tree-based ortholog | 1-to-1 | FV7G15200 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | FV7G15200 | 1 | ||
Glycine max | Orthologous gene family | many-to-many | GM02G26791 GM09G15750 | 2 | |
Tree-based ortholog | 1-to-many | GM02G26791 GM09G15750 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | GM09G15750 GM02G26791 | 2 | ||
Gossypium raimondii | Orthologous gene family | many-to-many | GR02G03610 GR09G35360 | 2 | |
Tree-based ortholog | 1-to-many | GR02G03610 GR09G35360 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | GR09G35360 | 1 | ||
Lotus japonicus | Orthologous gene family | many-to-1 | LJ5G018040 | 1 | |
Tree-based ortholog | 1-to-1 | LJ5G018040 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | LJ5G018040 | 1 | ||
Malus domestica | Orthologous gene family | many-to-1 | MD02G021790 | 1 | |
Tree-based ortholog | 1-to-many | MD00G101910 MD02G021790 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | MD02G021790 | 1 | ||
Manihot esculenta | Orthologous gene family | many-to-many | ME05280G00050 ME08245G00050 | 2 | |
Tree-based ortholog | 1-to-many | ME08245G00050 ME05280G00050 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | ME08245G00050 ME05280G00050 | 2 | ||
Medicago truncatula | Orthologous gene family | many-to-1 | MT1G056890 | 1 | |
Tree-based ortholog | 1-to-1 | MT1G056890 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | MT1G056890 | 1 | ||
Oryza sativa ssp. japonica | Orthologous gene family | many-to-many | OS03G62870 OS06G48230 | 2 | |
Tree-based ortholog | 1-to-many | OS03G62870 OS06G48230 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OS06G48230 | 1 | ||
Ostreococcus lucimarinus | Orthologous gene family | many-to-1 | OL10G01290 | 1 | |
Tree-based ortholog | 1-to-1 | OL10G01290 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OL10G01290 | 1 | ||
Physcomitrella patens | Orthologous gene family | many-to-1 | PP00030G00810 | 1 | |
Tree-based ortholog | 1-to-1 | PP00030G00810 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PP00030G00810 | 1 | ||
Populus trichocarpa | Orthologous gene family | many-to-1 | PT13G12050 | 1 | |
Tree-based ortholog | 1-to-1 | PT13G12050 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PT13G12050 | 1 | ||
Prunus persica | Orthologous gene family | many-to-1 | PPE_004G25630 | 1 | |
Tree-based ortholog | 1-to-1 | PPE_004G25630 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PPE_004G25630 | 1 | ||
Ricinus communis | Orthologous gene family | many-to-1 | RC30000G00110 | 1 | |
Tree-based ortholog | 1-to-1 | RC30000G00110 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | RC30000G00110 | 1 | ||
Solanum lycopersicum | Orthologous gene family | many-to-1 | SL03G031690 | 1 | |
Tree-based ortholog | 1-to-many | SL01G081150 SL03G031690 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | SL03G031690 | 1 | ||
Solanum tuberosum | Orthologous gene family | many-to-1 | ST03G008160 | 1 | |
Tree-based ortholog | 1-to-many | ST01G027990 ST03G008160 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ST03G008160 | 1 | ||
Thellungiella parvula | Orthologous gene family | many-to-many | TP1G40680 TP5G03560 | 2 | |
Tree-based ortholog | 1-to-many | TP5G03560 TP1G40680 | 2 | ||
Anchor point | N/A | TP5G03560 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | TP1G40680 TP5G03560 | 2 | ||
Theobroma cacao | Orthologous gene family | many-to-1 | TC0007G14320 | 1 | |
Tree-based ortholog | 1-to-1 | TC0010G07730 | 1 | ||
Anchor point | N/A | TC0004G17580 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TC0007G14320 | 1 | ||
Vitis vinifera | Orthologous gene family | many-to-1 | VV05G12890 | 1 | |
Tree-based ortholog | 1-to-many | VV05G12890 VV05G12910 | 2 | ||
Anchor point | N/A | VV05G12890 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | VV05G12890 | 1 | ||
Zea mays | Orthologous gene family | many-to-1 | ZM05G00590 | 1 | |
Tree-based ortholog | 1-to-1 | ZM05G14380 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ZM05G00590 | 1 |