Integrative Orthology Viewer: AL5G25150 (Arabidopsis lyrata)
Inparalogs
Organism | Source | Genes | #genes | Details |
---|---|---|---|---|
Arabidopsis lyrata | Orthologous gene family | AL3G13050 AL5G21030 AL5G25150 ... | 5 | |
Tree-based ortholog | AL5G25150 | 1 | ||
Anchor point | AL6G01860 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | AL5G25150 | 1 |
Orthologs
Organism | Source | Type | Genes | #genes | Details |
---|---|---|---|---|---|
Amborella trichopoda | Orthologous gene family | many-to-many | ATR_00001G01130 ATR_00023G01310 | 2 | |
Tree-based ortholog | 1-to-1 | ATR_00023G01310 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ATR_00023G01310 | 1 | ||
Arabidopsis thaliana | Orthologous gene family | many-to-many | AT3G12620 AT3G51370 AT3G55050 ... | 5 | |
Tree-based ortholog | 1-to-1 | AT3G55050 | 1 | ||
Anchor point | 1-to-many | AT3G55050 AT5G02760 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AT3G55050 | 1 | ||
Beta vulgaris | Orthologous gene family | many-to-many | BV2G18630 BV6G01440 BV9G01880 | 3 | |
Tree-based ortholog | 1-to-1 | BV2G18630 | 1 | ||
Anchor point | 1-to-1 | BV2G18630 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BV2G18630 | 1 | ||
Brassica rapa | Orthologous gene family | many-to-many | BR01G21580 BR01G36440 BR04G04310 ... | 8 | |
Tree-based ortholog | 1-to-many | BR09G35990 BR04G04310 | 2 | ||
Anchor point | 1-to-many | BR04G04310 BR09G35990 BR10G28340 | 3 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BR04G04310 | 1 | ||
Capsella rubella | Orthologous gene family | many-to-many | CRU_003G11440 CRU_005G16620 CRU_005G20410 ... | 4 | |
Tree-based ortholog | 1-to-1 | CRU_005G20410 | 1 | ||
Anchor point | 1-to-many | CRU_006G01490 CRU_005G20410 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CRU_005G20410 | 1 | ||
Carica papaya | Orthologous gene family | many-to-many | CP00001G02840 CP00020G01080 | 2 | |
Tree-based ortholog | 1-to-1 | CP00001G02840 | 1 | ||
Anchor point | 1-to-1 | CP00001G02840 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CP00020G01080 | 1 | ||
Chlamydomonas reinhardtii | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CR12G10110 | 1 | |
Citrullus lanatus | Orthologous gene family | many-to-many | CL01G20770 CL02G04060 CL02G12300 ... | 6 | |
Tree-based ortholog | 1-to-1 | CL02G14030 | 1 | ||
Anchor point | 1-to-many | CL10G18690 CL02G14030 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CL02G14030 | 1 | ||
Citrus sinensis | Orthologous gene family | many-to-many | CS00017G01730 CS00023G01060 CS00024G01590 ... | 4 | |
Tree-based ortholog | 1-to-1 | CS00024G01590 | 1 | ||
Anchor point | 1-to-1 | CS00024G01590 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CS00023G01060 | 1 | ||
Cucumis melo | Orthologous gene family | many-to-many | CM00007G09750 CM00011G02230 CM00016G00070 ... | 5 | |
Tree-based ortholog | 1-to-1 | CM00016G00070 | 1 | ||
Anchor point | 1-to-many | CM00011G02230 CM00016G00070 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CM00016G00070 | 1 | ||
Eucalyptus grandis | Orthologous gene family | many-to-many | EG0001G09780 EG0007G13200 EG0007G21900 ... | 5 | |
Tree-based ortholog | 1-to-1 | EG0007G21900 | 1 | ||
Anchor point | 1-to-1 | EG0007G21900 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | EG0007G21900 | 1 | ||
Fragaria vesca | Orthologous gene family | many-to-many | FV1G13010 FV2G27050 FV6G14330 ... | 4 | |
Tree-based ortholog | 1-to-1 | FV7G25030 | 1 | ||
Anchor point | 1-to-many | FV7G25030 FV6G14330 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | FV7G25030 | 1 | ||
Glycine max | Orthologous gene family | many-to-many | GM02G05030 GM03G33320 GM10G05460 ... | 10 | |
Tree-based ortholog | 1-to-many | GM20G38800 GM10G44080 | 2 | ||
Anchor point | 1-to-many | GM03G33320 GM10G44080 GM10G05460 ... | 4 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | GM10G44080 GM20G38800 | 2 | ||
Gossypium raimondii | Orthologous gene family | many-to-many | GR06G17740 GR07G04760 GR09G42160 ... | 7 | |
Tree-based ortholog | 1-to-many | GR11G24230 GR10G20350 GR12G09220 | 3 | ||
Anchor point | 1-to-many | GR11G24230 GR12G09220 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | GR10G20350 | 1 | ||
Lotus japonicus | Orthologous gene family | many-to-many | LJ1G010600 LJ1G036480 LJ1G063570 ... | 4 | |
Tree-based ortholog | 1-to-many | LJ5G009940 LJ1G063570 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | LJ5G009940 | 1 | ||
Malus domestica | Orthologous gene family | many-to-many | MD00G069960 MD00G167260 MD00G239980 ... | 10 | |
Tree-based ortholog | 1-to-many | MD00G167260 MD10G028390 MD01G009730 | 3 | ||
Anchor point | 1-to-many | MD10G028390 MD01G009730 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | MD10G028390 MD01G009730 | 2 | ||
Manihot esculenta | Orthologous gene family | many-to-many | ME02401G00040 ME03329G00070 ME04165G00280 ... | 8 | |
Tree-based ortholog | 1-to-many | ME04165G00280 ME12004G00370 | 2 | ||
Anchor point | 1-to-many | ME04165G00280 ME04651G00090 ME12004G00370 | 3 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | ME04165G00280 ME12004G00370 | 2 | ||
Medicago truncatula | Orthologous gene family | many-to-many | MT1G067210 MT1G112840 MT1G116260 ... | 6 | |
Tree-based ortholog | 1-to-1 | MT1G116260 | 1 | ||
Anchor point | 1-to-many | MT1G116260 MT1G067210 MT7G100240 | 3 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | MT1G116260 | 1 | ||
Oryza sativa ssp. japonica | Orthologous gene family | many-to-many | OS01G74530 OS03G04430 OS06G50380 ... | 4 | |
Tree-based ortholog | 1-to-1 | OS01G74530 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OS06G50380 | 1 | ||
Ostreococcus lucimarinus | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OL07G02020 | 1 | |
Physcomitrella patens | Orthologous gene family | many-to-many | PP00012G00220 PP00019G00420 PP00123G00430 ... | 5 | |
Tree-based ortholog | 1-to-many | PP00207G00420 PP00123G00430 PP00012G00220 ... | 5 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PP00012G00220 PP00123G00430 PP00272G00140 ... | 5 | ||
Populus trichocarpa | Orthologous gene family | many-to-many | PT04G17710 PT05G10850 PT07G06110 ... | 7 | |
Tree-based ortholog | 1-to-many | PT10G21470 PT08G04690 | 2 | ||
Anchor point | 1-to-many | PT08G04690 PT10G21470 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PT08G04690 PT10G21470 | 2 | ||
Prunus persica | Orthologous gene family | many-to-many | PPE_002G21410 PPE_006G25310 PPE_008G18520 | 3 | |
Tree-based ortholog | 1-to-1 | PPE_002G21410 | 1 | ||
Anchor point | 1-to-many | PPE_002G21410 PPE_006G25310 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PPE_002G21410 | 1 | ||
Ricinus communis | Orthologous gene family | many-to-many | RC29784G00010 RC29805G00430 RC29869G00380 | 3 | |
Tree-based ortholog | 1-to-1 | RC29758G00200 | 1 | ||
Anchor point | 1-to-many | RC29758G00200 RC29805G00430 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | RC29784G00010 | 1 | ||
Solanum lycopersicum | Orthologous gene family | many-to-many | SL01G111730 SL02G083420 SL03G033340 ... | 6 | |
Tree-based ortholog | 1-to-1 | SL05G055980 | 1 | ||
Anchor point | 1-to-many | SL09G007080 SL10G084410 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | SL09G007080 | 1 | ||
Solanum tuberosum | Orthologous gene family | many-to-many | ST02G026710 ST03G008980 ST09G006250 ... | 5 | |
Tree-based ortholog | 1-to-1 | ST05G029170 | 1 | ||
Anchor point | 1-to-many | ST09G006250 ST10G024550 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ST10G024550 | 1 | ||
Thellungiella parvula | Orthologous gene family | many-to-many | TP3G10760 TP5G07370 TP5G10850 ... | 4 | |
Tree-based ortholog | 1-to-1 | TP5G07370 | 1 | ||
Anchor point | 1-to-many | TP5G07370 TP6G39820 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TP5G07370 | 1 | ||
Theobroma cacao | Orthologous gene family | many-to-many | TC0005G04870 TC0010G06050 | 2 | |
Tree-based ortholog | 1-to-1 | TC0010G06050 | 1 | ||
Anchor point | 1-to-1 | TC0010G06050 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TC0010G06050 | 1 | ||
Vitis vinifera | Orthologous gene family | many-to-many | VV08G01950 VV13G08900 | 2 | |
Tree-based ortholog | 1-to-1 | VV13G08900 | 1 | ||
Anchor point | 1-to-many | VV08G01950 VV13G08900 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | VV13G08900 | 1 | ||
Zea mays | Orthologous gene family | many-to-many | ZM01G02810 ZM01G02820 ZM01G02830 ... | 7 | |
Tree-based ortholog | 1-to-many | ZM05G15850 ZM06G10020 ZM08G03120 ... | 8 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | ZM09G28170 ZM01G02830 ZM01G02820 | 3 |