Integrative Orthology Viewer: AL5G25100 (Arabidopsis lyrata)
Inparalogs
Organism | Source | Genes | #genes | Details |
---|---|---|---|---|
Arabidopsis lyrata | Orthologous gene family | AL5G25090 AL5G25100 | 2 | |
Tree-based ortholog | AL5G25100 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | AL5G25100 | 1 |
Orthologs
Organism | Source | Type | Genes | #genes | Details |
---|---|---|---|---|---|
Amborella trichopoda | Orthologous gene family | many-to-1 | ATR_00023G01610 | 1 | |
Tree-based ortholog | 1-to-1 | ATR_00023G01610 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ATR_00023G01610 | 1 | ||
Arabidopsis thaliana | Orthologous gene family | many-to-many | AT3G55000 AT3G55005 | 2 | |
Tree-based ortholog | 1-to-1 | AT3G55005 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AT3G55005 | 1 | ||
Beta vulgaris | Orthologous gene family | many-to-1 | BV0G68930 | 1 | |
Tree-based ortholog | 1-to-1 | BV0G68930 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BV0G68930 | 1 | ||
Brassica rapa | Orthologous gene family | many-to-1 | BR07G14440 | 1 | |
Tree-based ortholog | 1-to-many | BR07G14440 BR09G25460 BR09G35930 | 3 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BR07G14440 | 1 | ||
Capsella rubella | Orthologous gene family | many-to-many | CRU_005G20350 CRU_005G20360 | 2 | |
Tree-based ortholog | 1-to-1 | CRU_005G20360 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CRU_005G20360 | 1 | ||
Carica papaya | Orthologous gene family | many-to-1 | CP00001G02710 | 1 | |
Tree-based ortholog | 1-to-1 | CP00001G02710 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CP00001G02710 | 1 | ||
Citrullus lanatus | Orthologous gene family | many-to-1 | CL09G20670 | 1 | |
Tree-based ortholog | 1-to-1 | CL09G20670 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CL09G20670 | 1 | ||
Citrus sinensis | Orthologous gene family | many-to-1 | CS00024G01680 | 1 | |
Tree-based ortholog | 1-to-1 | CS00024G01680 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CS00024G01680 | 1 | ||
Cucumis melo | Orthologous gene family | many-to-1 | CM00079G00590 | 1 | |
Tree-based ortholog | 1-to-1 | CM00079G00590 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CM00079G00590 | 1 | ||
Eucalyptus grandis | Orthologous gene family | many-to-1 | EG0010G10050 | 1 | |
Tree-based ortholog | 1-to-1 | EG0010G10050 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | EG0010G10050 | 1 | ||
Fragaria vesca | Orthologous gene family | many-to-1 | FV7G24920 | 1 | |
Tree-based ortholog | 1-to-1 | FV7G24920 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | FV7G24920 | 1 | ||
Glycine max | Orthologous gene family | many-to-many | GM10G44070 GM20G38790 | 2 | |
Tree-based ortholog | 1-to-many | GM20G38790 GM10G44070 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | GM20G38790 GM10G44070 | 2 | ||
Gossypium raimondii | Orthologous gene family | many-to-many | GR11G24180 GR12G09270 | 2 | |
Tree-based ortholog | 1-to-many | GR12G09270 GR11G24180 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | GR12G09270 | 1 | ||
Malus domestica | Orthologous gene family | many-to-many | MD01G009780 MD10G028300 | 2 | |
Tree-based ortholog | 1-to-many | MD10G028300 MD01G009780 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | MD01G009780 MD10G028300 | 2 | ||
Manihot esculenta | Orthologous gene family | many-to-1 | ME04165G00230 | 1 | |
Tree-based ortholog | 1-to-many | ME12004G00470 ME04165G00230 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ME04165G00230 | 1 | ||
Medicago truncatula | Orthologous gene family | many-to-1 | MT1G116240 | 1 | |
Tree-based ortholog | 1-to-1 | MT1G116240 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | MT1G116240 | 1 | ||
Oryza sativa ssp. japonica | Orthologous gene family | many-to-many | OS11G01170 OS12G01170 | 2 | |
Tree-based ortholog | 1-to-many | OS11G01170 OS12G01170 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | OS11G01170 OS12G01170 | 2 | ||
Physcomitrella patens | Tree-based ortholog | 1-to-1 | PP00150G00280 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PP00150G00280 | 1 | ||
Populus trichocarpa | Orthologous gene family | many-to-many | PT08G04600 PT10G21550 | 2 | |
Tree-based ortholog | 1-to-many | PT08G04600 PT10G21550 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PT08G04600 | 1 | ||
Prunus persica | Orthologous gene family | many-to-1 | PPE_002G21340 | 1 | |
Tree-based ortholog | 1-to-1 | PPE_002G21340 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PPE_002G21340 | 1 | ||
Ricinus communis | Orthologous gene family | many-to-1 | RC29923G00530 | 1 | |
Tree-based ortholog | 1-to-1 | RC29923G00530 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | RC29923G00530 | 1 | ||
Solanum lycopersicum | Orthologous gene family | many-to-1 | SL04G049710 | 1 | |
Tree-based ortholog | 1-to-many | SL04G009550 SL04G049710 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | SL04G049710 | 1 | ||
Solanum tuberosum | Orthologous gene family | many-to-many | ST04G009490 ST04G013910 | 2 | |
Tree-based ortholog | 1-to-many | ST04G009490 ST04G013910 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ST04G009490 | 1 | ||
Thellungiella parvula | Orthologous gene family | many-to-1 | TP5G07420 | 1 | |
Tree-based ortholog | 1-to-many | TP5G07430 TP5G07420 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TP5G07420 | 1 | ||
Theobroma cacao | Orthologous gene family | many-to-1 | TC0010G06160 | 1 | |
Tree-based ortholog | 1-to-1 | TC0010G06160 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TC0010G06160 | 1 | ||
Vitis vinifera | Orthologous gene family | many-to-1 | VV13G08990 | 1 | |
Tree-based ortholog | 1-to-1 | VV13G08990 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | VV13G08990 | 1 | ||
Zea mays | Orthologous gene family | many-to-1 | ZM03G40870 | 1 | |
Tree-based ortholog | 1-to-many | ZM03G40870 ZM02G25980 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ZM03G40870 | 1 |