Integrative Orthology Viewer: AL5G23910 (Arabidopsis lyrata)
Inparalogs
Organism | Source | Genes | #genes | Details |
---|---|---|---|---|
Arabidopsis lyrata | Orthologous gene family | AL5G23910 AL7G32490 | 2 | |
Tree-based ortholog | AL5G23910 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | AL7G32490 AL5G23910 | 2 |
Orthologs
Organism | Source | Type | Genes | #genes | Details |
---|---|---|---|---|---|
Amborella trichopoda | Orthologous gene family | many-to-many | ATR_00024G02080 ATR_00030G00970 | 2 | |
Tree-based ortholog | 1-to-many | ATR_00024G02080 ATR_00030G00970 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-many | ATR_00024G02080 ATR_00030G00970 | 2 | ||
Arabidopsis thaliana | Orthologous gene family | many-to-1 | AT5G35530 | 1 | |
Tree-based ortholog | 1-to-1 | AT5G35530 | 1 | ||
Anchor point | N/A | AT3G53870 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | AT2G31610 | 1 | ||
Beta vulgaris | Tree-based ortholog | 1-to-1 | BV2G02420 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | BV0G29950 | 1 | ||
Brassica rapa | Orthologous gene family | many-to-many | BR03G15840 BR03G15920 BR04G18600 ... | 5 | |
Tree-based ortholog | 1-to-many | BR03G15840 BR03G15920 BR05G12420 ... | 6 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-many | BR04G18600 BR04G18620 | 2 | ||
Capsella rubella | Orthologous gene family | many-to-1 | CRU_007G29970 | 1 | |
Tree-based ortholog | 1-to-many | CRU_007G29970 CRU_005G19220 CRU_004G12530 | 3 | ||
Anchor point | N/A | CRU_005G19220 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CRU_007G29970 | 1 | ||
Carica papaya | Orthologous gene family | many-to-1 | CP00126G00310 | 1 | |
Tree-based ortholog | 1-to-many | CP00126G00310 CP00028G00690 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CP00126G00310 | 1 | ||
Chlamydomonas reinhardtii | Orthologous gene family | many-to-1 | CR02G07640 | 1 | |
Tree-based ortholog | 1-to-1 | CR02G07640 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CR02G07640 | 1 | ||
Citrullus lanatus | Orthologous gene family | many-to-many | CL09G00640 CL11G17460 | 2 | |
Tree-based ortholog | 1-to-1 | CL07G12180 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CL09G00640 | 1 | ||
Citrus sinensis | Orthologous gene family | many-to-1 | CS00140G00080 | 1 | |
Tree-based ortholog | 1-to-1 | CS00013G01130 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CS00140G00080 | 1 | ||
Cucumis melo | Orthologous gene family | many-to-many | CM00003G07810 CM00067G01410 | 2 | |
Tree-based ortholog | 1-to-many | CM00003G07810 CM00067G01410 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CM00067G01410 | 1 | ||
Eucalyptus grandis | Orthologous gene family | many-to-many | EG0003G05790 EG0003G27610 | 2 | |
Tree-based ortholog | 1-to-many | EG0003G27610 EG0003G05790 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | EG0003G05790 | 1 | ||
Fragaria vesca | Orthologous gene family | many-to-many | FV1G09920 FV6G30210 | 2 | |
Tree-based ortholog | 1-to-many | FV6G30210 FV1G09920 FV7G38860 | 3 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | FV6G30210 | 1 | ||
Glycine max | Orthologous gene family | many-to-many | GM09G28440 GM10G26790 GM10G26890 ... | 6 | |
Tree-based ortholog | 1-to-many | GM14G15230 GM16G33240 GM16G33230 ... | 7 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-many | GM10G26790 GM16G33230 GM10G26890 ... | 5 | ||
Gossypium raimondii | Orthologous gene family | many-to-many | GR01G01470 GR09G03470 GR09G04120 | 3 | |
Tree-based ortholog | 1-to-1 | GR09G04120 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | GR09G03470 | 1 | ||
Lotus japonicus | Orthologous gene family | many-to-1 | LJ1G042020 | 1 | |
Tree-based ortholog | 1-to-1 | LJ1G042020 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | LJ1G042020 | 1 | ||
Malus domestica | Orthologous gene family | many-to-many | MD15G000440 MD15G015520 | 2 | |
Tree-based ortholog | 1-to-1 | MD00G030350 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | MD15G015520 | 1 | ||
Manihot esculenta | Orthologous gene family | many-to-many | ME00368G00030 ME07318G00020 ME07859G00380 ... | 4 | |
Tree-based ortholog | 1-to-many | ME00368G00030 ME07859G00380 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-many | ME00368G00030 ME07859G00380 | 2 | ||
Medicago truncatula | Orthologous gene family | many-to-many | MT1G023000 MT1G044660 | 2 | |
Tree-based ortholog | 1-to-many | MT1G044660 MT1G023000 MT6G052220 ... | 5 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-many | MT1G023000 MT1G044660 | 2 | ||
Oryza sativa ssp. japonica | Orthologous gene family | many-to-many | OS03G38000 OS07G41750 | 2 | |
Tree-based ortholog | 1-to-1 | OS07G41750 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | OS03G38000 | 1 | ||
Ostreococcus lucimarinus | Orthologous gene family | many-to-1 | OL04G01240 | 1 | |
Tree-based ortholog | 1-to-1 | OL04G01240 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | OL04G01240 | 1 | ||
Physcomitrella patens | Orthologous gene family | many-to-many | PP00029G01070 PP00031G01040 PP00041G00630 ... | 6 | |
Tree-based ortholog | 1-to-many | PP00031G01040 PP00127G00390 PP00029G01070 ... | 6 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-many | PP00041G00630 PP00454G00030 PP00127G00390 ... | 6 | ||
Populus trichocarpa | Orthologous gene family | many-to-many | PT06G22210 PT15G07170 PT18G04910 | 3 | |
Tree-based ortholog | 1-to-many | PT15G07170 PT12G07680 PT18G04910 ... | 4 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-many | PT18G04910 PT06G22210 | 2 | ||
Prunus persica | Orthologous gene family | many-to-many | PPE_001G41190 PPE_007G22210 | 2 | |
Tree-based ortholog | 1-to-1 | PPE_003G02910 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | PPE_001G41190 | 1 | ||
Ricinus communis | Orthologous gene family | many-to-many | RC29739G00410 RC29912G00020 | 2 | |
Tree-based ortholog | 1-to-1 | RC29739G00410 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | RC29739G00410 | 1 | ||
Solanum lycopersicum | Orthologous gene family | many-to-many | SL07G041310 SL08G061850 SL08G061960 | 3 | |
Tree-based ortholog | 1-to-many | SL08G061850 SL08G061960 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-many | SL08G061960 SL08G061850 | 2 | ||
Solanum tuberosum | Orthologous gene family | many-to-many | ST07G014640 ST08G013400 | 2 | |
Tree-based ortholog | 1-to-many | ST08G013400 ST08G013360 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | ST08G013400 | 1 | ||
Thellungiella parvula | Orthologous gene family | many-to-many | TP0G01630 TP7G06820 | 2 | |
Tree-based ortholog | 1-to-many | TP7G06820 TP0G01630 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | TP7G06820 | 1 | ||
Theobroma cacao | Orthologous gene family | many-to-many | TC0009G05840 TC0009G07620 | 2 | |
Tree-based ortholog | 1-to-1 | TC0009G05840 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | TC0009G05840 | 1 | ||
Vitis vinifera | Orthologous gene family | many-to-many | VV04G08800 VV09G02580 VV11G02800 | 3 | |
Tree-based ortholog | 1-to-1 | VV03G09600 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-many | VV11G02800 VV09G02580 | 2 | ||
Zea mays | Orthologous gene family | many-to-many | ZM04G07160 ZM07G26960 | 2 | |
Tree-based ortholog | 1-to-1 | ZM10G09840 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | ZM04G07160 | 1 |