Expansion plot
Gene family finder
Ks-graphs
Skyline plot
Synteny plot
WGDotplot
Functional clusters
WGMapping
BLAST
Workbench
Integrative Orthology Viewer:
AL5G19620
(Arabidopsis lyrata)
Inparalogs
| Organism | Source | Genes | #genes | Details |
|---|---|---|---|---|
| Arabidopsis lyrata | Orthologous gene family | AL5G19620 | 1 |  |
| Best-Hits-and-Inparalogs(BHI)family | AL5G19620 | 1 | ||
| Tree-based ortholog | AL5G19620 | 1 |
Orthologs
| Organism | Source | Type | Genes | #genes | Details |
|---|---|---|---|---|---|
| Amborella trichopoda | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ATR_00051G00960 | 1 | |
| Tree-based ortholog | 1-to-1 | ATR_00051G00960 | 1 | ||
| Arabidopsis thaliana | Anchor point | N/A | AT3G50110 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AT3G50110 | 1 | ||
| Tree-based ortholog | 1-to-1 | AT3G50110 | 1 | ||
| Beta vulgaris | Anchor point | N/A | BV6G22780 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BV9G20010 | 1 | ||
| Tree-based ortholog | 1-to-1 | BV6G22780 | 1 | ||
| Brassica rapa | Anchor point | N/A | BR03G41460 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BR03G41460 | 1 | ||
| Tree-based ortholog | 1-to-1 | BR03G41460 | 1 | ||
| Capsella rubella | Anchor point | N/A | CRU_005G15400 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CRU_005G15400 | 1 | ||
| Tree-based ortholog | 1-to-1 | CRU_005G15400 | 1 | ||
| Carica papaya | Anchor point | N/A | CP00055G00960 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CP00200G00150 | 1 | ||
| Tree-based ortholog | 1-to-1 | CP00055G00960 | 1 | ||
| Chlamydomonas reinhardtii | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CR06G15190 | 1 | |
| Tree-based ortholog | 1-to-1 | CR06G15190 | 1 | ||
| Citrullus lanatus | Anchor point | N/A | CL01G17310 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CL02G06330 | 1 | ||
| Tree-based ortholog | 1-to-1 | CL02G06330 | 1 | ||
| Citrus sinensis | Anchor point | N/A | CS00006G01670 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CS00065G00530 | 1 | ||
| Tree-based ortholog | 1-to-1 | CS00065G00530 | 1 | ||
| Cucumis melo | Anchor point | N/A | CM00034G00790 CM00007G06080 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CM00007G06080 | 1 | ||
| Tree-based ortholog | 1-to-1 | CM00034G00790 | 1 | ||
| Eucalyptus grandis | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | EG0009G06440 | 1 | |
| Tree-based ortholog | 1-to-1 | EG0007G10060 | 1 | ||
| Fragaria vesca | Anchor point | N/A | FV1G17700 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | FV6G38410 | 1 | ||
| Tree-based ortholog | 1-to-1 | FV6G38410 | 1 | ||
| Glycine max | Anchor point | N/A | GM11G05610 GM01G39650 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | GM11G05610 GM01G39650 | 2 | ||
| Tree-based ortholog | 1-to-many | GM10G41000 GM20G26280 | 2 | ||
| Gossypium raimondii | Anchor point | N/A | GR05G23580 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | GR07G05550 | 1 | ||
| Tree-based ortholog | 1-to-many | GR08G02360 GR05G23580 GR02G00870 | 3 | ||
| Lotus japonicus | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | LJ5G037480 | 1 | |
| Tree-based ortholog | 1-to-1 | LJ5G037480 | 1 | ||
| Malus domestica | Anchor point | N/A | MD02G015940 MD15G022560 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | MD15G022560 MD00G213500 MD00G271440 | 3 | ||
| Tree-based ortholog | 1-to-1 | MD17G018630 | 1 | ||
| Manihot esculenta | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ME01624G00280 | 1 | |
| Tree-based ortholog | 1-to-1 | ME01046G00050 | 1 | ||
| Medicago truncatula | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | MT5G016550 | 1 | |
| Tree-based ortholog | 1-to-1 | MT1G107540 | 1 | ||
| Oryza sativa ssp. japonica | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OS12G21890 | 1 | |
| Tree-based ortholog | 1-to-1 | OS12G21890 | 1 | ||
| Physcomitrella patens | Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PP00172G00370 PP00121G00440 | 2 | |
| Tree-based ortholog | 1-to-many | PP00071G00950 PP00465G00070 PP00121G00440 ... | 4 | ||
| Populus trichocarpa | Anchor point | N/A | PT07G04790 PT09G09800 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PT07G04790 | 1 | ||
| Tree-based ortholog | 1-to-many | PT01G30200 PT09G09800 | 2 | ||
| Prunus persica | Anchor point | N/A | PPE_006G23880 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PPE_008G15080 | 1 | ||
| Tree-based ortholog | 1-to-1 | PPE_008G15080 | 1 | ||
| Ricinus communis | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | RC29970G00050 | 1 | |
| Tree-based ortholog | 1-to-1 | RC29801G00670 | 1 | ||
| Solanum lycopersicum | Anchor point | N/A | SL02G093000 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | SL01G107750 | 1 | ||
| Tree-based ortholog | 1-to-1 | SL01G107750 | 1 | ||
| Solanum tuberosum | Anchor point | N/A | ST02G031480 ST01G044870 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ST01G044870 | 1 | ||
| Tree-based ortholog | 1-to-1 | ST01G044870 | 1 | ||
| Thellungiella parvula | Anchor point | N/A | TP5G12010 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TP5G12010 | 1 | ||
| Tree-based ortholog | 1-to-1 | TP5G12010 | 1 | ||
| Theobroma cacao | Anchor point | N/A | TC0001G05970 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TC0001G05970 | 1 | ||
| Tree-based ortholog | 1-to-1 | TC0002G10160 | 1 | ||
| Vitis vinifera | Anchor point | N/A | VV07G04960 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | VV03G00680 | 1 | ||
| Tree-based ortholog | 1-to-1 | VV03G00680 | 1 | ||
| Zea mays | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ZM02G47080 | 1 | |
| Tree-based ortholog | 1-to-1 | ZM02G47080 | 1 |