Integrative Orthology Viewer: AL5G16800 (Arabidopsis lyrata)
Inparalogs
Organism | Source | Genes | #genes | Details |
---|---|---|---|---|
Arabidopsis lyrata | Orthologous gene family | AL1G25620 AL3G27880 AL5G16800 | 3 | |
Tree-based ortholog | AL3G24150 AL7G22630 AL5G16800 | 3 | ||
Best-Hits-and-Inparalogs(BHI)family | AL5G16800 | 1 |
Orthologs
Organism | Source | Type | Genes | #genes | Details |
---|---|---|---|---|---|
Amborella trichopoda | Orthologous gene family | many-to-many | ATR_00006G03050 ATR_00078G01920 | 2 | |
Tree-based ortholog | many-to-1 | ATR_00006G03050 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ATR_00006G03050 | 1 | ||
Arabidopsis thaliana | Orthologous gene family | many-to-many | AT1G23800 AT3G24503 AT3G48000 | 3 | |
Tree-based ortholog | many-to-1 | AT3G48000 | 1 | ||
Anchor point | N/A | AT3G48000 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AT3G48000 | 1 | ||
Beta vulgaris | Orthologous gene family | many-to-many | BV5G02670 BV6G09990 BV6G10000 ... | 7 | |
Tree-based ortholog | many-to-1 | BV5G02670 | 1 | ||
Anchor point | N/A | BV5G02670 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BV5G02670 | 1 | ||
Brassica rapa | Orthologous gene family | many-to-many | BR03G37970 BR06G17330 BR06G20080 ... | 5 | |
Tree-based ortholog | many-to-1 | BR06G17330 | 1 | ||
Anchor point | N/A | BR06G20020 BR06G17330 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BR06G20080 | 1 | ||
Capsella rubella | Orthologous gene family | many-to-many | CRU_001G22380 CRU_003G23810 CRU_005G13220 | 3 | |
Tree-based ortholog | many-to-1 | CRU_005G13220 | 1 | ||
Anchor point | N/A | CRU_005G13220 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CRU_005G13220 | 1 | ||
Carica papaya | Orthologous gene family | many-to-many | CP00023G00970 CP00069G00120 CP00124G00310 | 3 | |
Tree-based ortholog | many-to-1 | CP00124G00310 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CP00124G00310 | 1 | ||
Chlamydomonas reinhardtii | Orthologous gene family | many-to-1 | CR12G05600 | 1 | |
Tree-based ortholog | many-to-1 | CR12G05600 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CR12G05600 | 1 | ||
Citrullus lanatus | Orthologous gene family | many-to-many | CL02G16900 CL06G10740 CL06G17480 | 3 | |
Tree-based ortholog | many-to-1 | CL06G17480 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CL06G17480 | 1 | ||
Citrus sinensis | Orthologous gene family | many-to-many | CS00003G02740 CS00020G01620 CS00128G00240 ... | 4 | |
Tree-based ortholog | many-to-1 | CS00020G01620 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CS00003G02740 | 1 | ||
Cucumis melo | Orthologous gene family | many-to-many | CM00003G05070 CM00030G00220 CM00077G00450 | 3 | |
Tree-based ortholog | many-to-1 | CM00030G00220 | 1 | ||
Anchor point | N/A | CM00030G00220 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CM00030G00220 | 1 | ||
Eucalyptus grandis | Orthologous gene family | many-to-many | EG0002G03020 EG0002G27680 EG0003G29860 ... | 12 | |
Tree-based ortholog | many-to-many | EG0011G23950 EG0002G03020 | 2 | ||
Anchor point | N/A | EG0011G23950 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | EG0002G03020 | 1 | ||
Fragaria vesca | Orthologous gene family | many-to-many | FV1G00860 FV1G00870 FV1G00880 ... | 7 | |
Tree-based ortholog | many-to-1 | FV5G05990 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | FV5G05990 | 1 | ||
Glycine max | Orthologous gene family | many-to-many | GM01G03820 GM02G03870 GM04G35220 ... | 18 | |
Tree-based ortholog | many-to-many | GM06G19560 GM04G35220 GM17G09860 | 3 | ||
Anchor point | N/A | GM17G09860 GM04G35220 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | GM06G19560 | 1 | ||
Gossypium raimondii | Orthologous gene family | many-to-many | GR01G00430 GR01G00440 GR01G26110 ... | 8 | |
Tree-based ortholog | many-to-1 | GR08G29430 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | GR08G29430 | 1 | ||
Lotus japonicus | Orthologous gene family | many-to-many | LJ2G011800 LJ2G011830 LJ2G015800 ... | 5 | |
Tree-based ortholog | many-to-1 | LJ4G027870 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | LJ4G027870 | 1 | ||
Malus domestica | Orthologous gene family | many-to-many | MD00G040650 MD00G042440 MD00G158770 ... | 13 | |
Tree-based ortholog | many-to-many | MD00G475090 MD00G040650 MD00G040660 ... | 4 | ||
Anchor point | N/A | MD06G014470 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | MD06G014470 MD00G475090 MD00G040650 | 3 | ||
Manihot esculenta | Orthologous gene family | many-to-many | ME00847G01150 ME00847G01160 ME04083G00220 ... | 6 | |
Tree-based ortholog | many-to-1 | ME04083G00220 | 1 | ||
Anchor point | N/A | ME04083G00220 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | ME09880G00080 ME06715G00260 | 2 | ||
Medicago truncatula | Orthologous gene family | many-to-many | MT3G078170 MT4G107040 MT6G086300 ... | 7 | |
Tree-based ortholog | many-to-many | MT4G107040 MT3G078170 | 2 | ||
Anchor point | N/A | MT3G078170 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | MT4G107040 | 1 | ||
Oryza sativa ssp. japonica | Orthologous gene family | many-to-many | OS01G40860 OS01G40870 OS02G49720 ... | 5 | |
Tree-based ortholog | many-to-many | OS02G49720 OS06G15990 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OS06G15990 | 1 | ||
Ostreococcus lucimarinus | Tree-based ortholog | many-to-many | OL08G00390 OL06G01940 OL07G01020 ... | 4 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OL10G02140 | 1 | ||
Physcomitrella patens | Orthologous gene family | many-to-many | PP00093G00430 PP00496G00010 | 2 | |
Tree-based ortholog | many-to-many | PP00496G00010 PP00218G00150 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PP00496G00010 | 1 | ||
Populus trichocarpa | Orthologous gene family | many-to-many | PT02G18990 PT12G07870 PT15G07410 ... | 4 | |
Tree-based ortholog | many-to-many | PT15G07410 PT12G07870 | 2 | ||
Anchor point | N/A | PT15G07410 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PT15G07410 PT12G07870 | 2 | ||
Prunus persica | Orthologous gene family | many-to-many | PPE_001G26630 PPE_005G18180 PPE_007G24800 | 3 | |
Tree-based ortholog | many-to-1 | PPE_005G18180 | 1 | ||
Anchor point | N/A | PPE_005G18180 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PPE_005G18180 | 1 | ||
Ricinus communis | Orthologous gene family | many-to-many | RC29631G00020 RC29912G02680 RC29912G02710 ... | 4 | |
Tree-based ortholog | many-to-1 | RC30147G06470 | 1 | ||
Anchor point | N/A | RC30147G06470 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | RC30147G06470 | 1 | ||
Solanum lycopersicum | Orthologous gene family | many-to-many | SL02G086970 SL03G114150 SL05G005700 ... | 5 | |
Tree-based ortholog | many-to-1 | SL03G114150 | 1 | ||
Anchor point | N/A | SL03G114150 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | SL03G114150 | 1 | ||
Solanum tuberosum | Orthologous gene family | many-to-many | ST02G035920 ST03G027530 ST05G012900 ... | 5 | |
Tree-based ortholog | many-to-1 | ST03G027530 | 1 | ||
Anchor point | N/A | ST03G027530 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ST03G027530 | 1 | ||
Thellungiella parvula | Orthologous gene family | many-to-many | TP1G21180 TP3G22290 TP5G13980 | 3 | |
Tree-based ortholog | many-to-1 | TP5G13980 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TP5G13980 | 1 | ||
Theobroma cacao | Orthologous gene family | many-to-many | TC0002G24400 TC0003G00890 TC0004G00750 ... | 4 | |
Tree-based ortholog | many-to-1 | TC0003G00890 | 1 | ||
Anchor point | N/A | TC0003G00890 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TC0003G00890 | 1 | ||
Vitis vinifera | Orthologous gene family | many-to-many | VV01G00590 VV01G13830 VV01G13850 ... | 5 | |
Tree-based ortholog | many-to-1 | VV17G02000 | 1 | ||
Anchor point | N/A | VV17G02000 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | VV17G02000 | 1 | ||
Zea mays | Orthologous gene family | many-to-many | ZM03G38660 ZM03G38670 ZM04G23840 ... | 6 | |
Tree-based ortholog | many-to-many | ZM04G23840 ZM09G07460 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ZM04G23840 | 1 |