Integrative Orthology Viewer: AL4G35030 (Arabidopsis lyrata)
Inparalogs
Organism | Source | Genes | #genes | Details |
---|---|---|---|---|
Arabidopsis lyrata | Orthologous gene family | AL0G06060 AL4G35030 | 2 | |
Tree-based ortholog | AL4G35030 | 1 | ||
Anchor point | AL1G01340 AL5G32920 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | AL0G06060 AL4G35030 | 2 |
Orthologs
Organism | Source | Type | Genes | #genes | Details |
---|---|---|---|---|---|
Amborella trichopoda | Tree-based ortholog | 1-to-1 | ATR_00018G00090 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | ATR_00018G00090 | 1 | ||
Arabidopsis thaliana | Orthologous gene family | many-to-1 | AT2G46870 | 1 | |
Tree-based ortholog | 1-to-1 | AT2G46870 | 1 | ||
Anchor point | many-to-many | AT3G61970 AT1G01030 AT2G46870 | 3 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | AT2G46870 | 1 | ||
Beta vulgaris | Tree-based ortholog | 1-to-1 | BV5G11190 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | BV5G11190 | 1 | ||
Brassica rapa | Orthologous gene family | many-to-many | BR03G22820 BR05G00930 | 2 | |
Tree-based ortholog | 1-to-1 | BR05G00930 | 1 | ||
Anchor point | many-to-many | BR09G01050 BR03G22820 BR04G00710 ... | 8 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | BR03G22820 | 1 | ||
Capsella rubella | Orthologous gene family | many-to-1 | CRU_004G28480 | 1 | |
Tree-based ortholog | 1-to-1 | CRU_004G28480 | 1 | ||
Anchor point | many-to-many | CRU_004G28480 CRU_005G27310 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CRU_004G28480 | 1 | ||
Carica papaya | Orthologous gene family | many-to-1 | CP00057G00700 | 1 | |
Tree-based ortholog | 1-to-1 | CP00037G01060 | 1 | ||
Anchor point | many-to-1 | CP00057G00700 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CP00057G00700 | 1 | ||
Chlamydomonas reinhardtii | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CR13G00150 | 1 | |
Citrullus lanatus | Orthologous gene family | many-to-1 | CL06G03350 | 1 | |
Tree-based ortholog | 1-to-1 | CL07G09510 | 1 | ||
Anchor point | many-to-1 | CL06G03350 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CL06G03350 | 1 | ||
Citrus sinensis | Orthologous gene family | many-to-1 | CS00001G05220 | 1 | |
Tree-based ortholog | 1-to-many | CS00001G05220 CS00009G03230 | 2 | ||
Anchor point | many-to-1 | CS00001G05220 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CS00001G05220 | 1 | ||
Cucumis melo | Orthologous gene family | many-to-1 | CM00052G00750 | 1 | |
Tree-based ortholog | 1-to-1 | CM00027G03030 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CM00005G07850 | 1 | ||
Eucalyptus grandis | Orthologous gene family | many-to-1 | EG0005G09210 | 1 | |
Tree-based ortholog | 1-to-1 | EG0005G09210 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | EG0005G09210 | 1 | ||
Fragaria vesca | Orthologous gene family | many-to-1 | FV7G04070 | 1 | |
Tree-based ortholog | 1-to-1 | FV0G41490 | 1 | ||
Anchor point | many-to-1 | FV7G04070 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | FV7G04070 | 1 | ||
Glycine max | Orthologous gene family | many-to-many | GM03G42301 GM19G45090 | 2 | |
Tree-based ortholog | 1-to-many | GM03G42301 GM19G45090 | 2 | ||
Anchor point | many-to-many | GM07G05381 GM19G45090 GM16G01951 ... | 4 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-many | GM07G05381 GM19G45090 GM03G42301 | 3 | ||
Gossypium raimondii | Orthologous gene family | many-to-1 | GR01G15020 | 1 | |
Tree-based ortholog | 1-to-1 | GR04G12820 | 1 | ||
Anchor point | many-to-many | GR03G07360 GR07G11420 GR08G13240 ... | 4 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | GR01G15020 | 1 | ||
Lotus japonicus | Orthologous gene family | many-to-1 | LJ1G075270 | 1 | |
Tree-based ortholog | 1-to-1 | LJ1G075270 | 1 | ||
Anchor point | many-to-many | LJ3G035390 LJ1G075270 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | LJ1G075270 | 1 | ||
Malus domestica | Orthologous gene family | many-to-many | MD01G007630 MD07G014710 | 2 | |
Tree-based ortholog | 1-to-many | MD07G014710 MD01G007630 | 2 | ||
Anchor point | many-to-many | MD07G014710 MD01G007630 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-many | MD07G014710 MD01G007630 | 2 | ||
Manihot esculenta | Orthologous gene family | many-to-many | ME03581G00040 ME07571G00200 | 2 | |
Tree-based ortholog | 1-to-1 | ME10712G00010 | 1 | ||
Anchor point | many-to-many | ME03581G00040 ME07571G00200 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-many | ME03581G00040 ME07571G00200 | 2 | ||
Medicago truncatula | Tree-based ortholog | 1-to-many | MT8G023990 MT7G117455 | 2 | |
Anchor point | many-to-1 | MT8G023990 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | MT8G023990 | 1 | ||
Oryza sativa ssp. japonica | Orthologous gene family | many-to-1 | OS03G02900 | 1 | |
Tree-based ortholog | 1-to-many | OS08G06120 OS04G49230 OS02G45850 ... | 5 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | OS03G02900 | 1 | ||
Physcomitrella patens | Tree-based ortholog | 1-to-many | PP00135G00390 PP00063G00290 | 2 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-many | PP00135G00390 PP00063G00290 | 2 | ||
Populus trichocarpa | Orthologous gene family | many-to-many | PT02G18160 PT14G10720 | 2 | |
Tree-based ortholog | 1-to-many | PT11G14970 PT01G45220 | 2 | ||
Anchor point | many-to-many | PT02G18160 PT14G10720 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-many | PT02G18160 PT14G10720 | 2 | ||
Prunus persica | Orthologous gene family | many-to-1 | PPE_002G19420 | 1 | |
Tree-based ortholog | 1-to-1 | PPE_005G14280 | 1 | ||
Anchor point | many-to-1 | PPE_002G19420 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | PPE_005G14280 | 1 | ||
Ricinus communis | Tree-based ortholog | 1-to-1 | RC30068G01040 | 1 | |
Anchor point | many-to-1 | RC30076G00350 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | RC30068G01040 | 1 | ||
Solanum lycopersicum | Tree-based ortholog | 1-to-1 | SL08G083400 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | SL08G013700 | 1 | ||
Solanum tuberosum | Tree-based ortholog | 1-to-1 | ST08G026920 | 1 | |
Anchor point | many-to-1 | ST08G009150 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | ST08G026920 | 1 | ||
Thellungiella parvula | Orthologous gene family | many-to-1 | TP4G28890 | 1 | |
Tree-based ortholog | 1-to-1 | TP4G28890 | 1 | ||
Anchor point | many-to-many | TP5G01380 TP4G28890 TP6G01440 | 3 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | TP4G28890 | 1 | ||
Theobroma cacao | Orthologous gene family | many-to-1 | TC0001G32940 | 1 | |
Tree-based ortholog | 1-to-1 | TC0003G21520 | 1 | ||
Anchor point | many-to-1 | TC0001G32940 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | TC0001G32940 | 1 | ||
Vitis vinifera | Orthologous gene family | many-to-1 | VV15G07630 | 1 | |
Tree-based ortholog | 1-to-1 | VV02G06020 | 1 | ||
Anchor point | many-to-many | VV02G06020 VV15G07630 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | VV02G06020 | 1 | ||
Zea mays | Tree-based ortholog | 1-to-many | ZM10G06600 ZM06G06750 ZM10G10140 ... | 10 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-many | ZM10G21460 ZM02G06440 | 2 |