Expansion plot
Gene family finder
Ks-graphs
Skyline plot
Synteny plot
WGDotplot
Functional clusters
WGMapping
BLAST
Workbench
Integrative Orthology Viewer:
AL4G34150
(Arabidopsis lyrata)
Inparalogs
| Organism | Source | Genes | #genes | Details |
|---|---|---|---|---|
| Arabidopsis lyrata | Orthologous gene family | AL4G34150 | 1 |  |
| Tree-based ortholog | AL4G34150 | 1 | ||
| Anchor point | AL5G32280 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | AL4G34150 | 1 |
Orthologs
| Organism | Source | Type | Genes | #genes | Details |
|---|---|---|---|---|---|
| Amborella trichopoda | Tree-based ortholog | 1-to-1 | ATR_00101G00920 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ATR_00075G00390 | 1 | ||
| Arabidopsis thaliana | Orthologous gene family | 1-to-1 | AT2G46160 | 1 | |
| Tree-based ortholog | 1-to-1 | AT2G46160 | 1 | ||
| Anchor point | 1-to-1 | AT2G46160 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AT2G46160 | 1 | ||
| Beta vulgaris | Tree-based ortholog | 1-to-1 | BV1G05910 | 1 | |
| Anchor point | 1-to-1 | BV1G05910 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BV1G05910 | 1 | ||
| Brassica rapa | Orthologous gene family | 1-to-1 | BR05G01550 | 1 | |
| Tree-based ortholog | 1-to-1 | BR04G27550 | 1 | ||
| Anchor point | 1-to-1 | BR04G27550 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BR05G01550 | 1 | ||
| Capsella rubella | Orthologous gene family | 1-to-1 | CRU_004G27810 | 1 | |
| Tree-based ortholog | 1-to-1 | CRU_005G26830 | 1 | ||
| Anchor point | 1-to-1 | CRU_005G26830 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CRU_004G27810 | 1 | ||
| Carica papaya | Tree-based ortholog | 1-to-1 | CP00011G00600 | 1 | |
| Anchor point | 1-to-1 | CP00011G00600 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CP00011G00600 | 1 | ||
| Citrullus lanatus | Tree-based ortholog | 1-to-1 | CL08G10420 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CL05G01450 | 1 | ||
| Citrus sinensis | Tree-based ortholog | 1-to-1 | CS00001G03700 | 1 | |
| Anchor point | 1-to-1 | CS00001G03700 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CS00001G03700 | 1 | ||
| Cucumis melo | Tree-based ortholog | 1-to-1 | CM00014G07610 | 1 | |
| Anchor point | 1-to-1 | CM00006G01050 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CM00006G01570 | 1 | ||
| Eucalyptus grandis | Tree-based ortholog | 1-to-many | EG0010G02620 EG0001G21600 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | EG0011G15810 | 1 | ||
| Fragaria vesca | Tree-based ortholog | 1-to-1 | FV7G06800 | 1 | |
| Anchor point | 1-to-1 | FV7G06800 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | FV7G06800 | 1 | ||
| Glycine max | Tree-based ortholog | 1-to-many | GM09G38880 GM18G47435 GM07G06850 | 3 | |
| Anchor point | 1-to-many | GM07G06850 GM09G38880 GM18G47435 | 3 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | GM07G06850 GM16G03430 | 2 | ||
| Gossypium raimondii | Tree-based ortholog | 1-to-1 | GR10G21570 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | GR04G15480 | 1 | ||
| Lotus japonicus | Tree-based ortholog | 1-to-1 | LJ3G011170 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | LJ1G034850 | 1 | ||
| Malus domestica | Tree-based ortholog | 1-to-1 | MD07G010280 | 1 | |
| Anchor point | 1-to-1 | MD07G010280 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | MD00G210570 MD07G010280 | 2 | ||
| Manihot esculenta | Tree-based ortholog | 1-to-1 | ME02658G00800 | 1 | |
| Anchor point | 1-to-1 | ME02658G00800 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | ME02658G00800 ME03581G01240 | 2 | ||
| Medicago truncatula | Tree-based ortholog | 1-to-many | MT7G079280 MT8G028465 | 2 | |
| Anchor point | 1-to-1 | MT8G028465 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | MT8G028465 | 1 | ||
| Oryza sativa ssp. japonica | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OS01G53500 | 1 | |
| Physcomitrella patens | Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PP00041G01300 PP00014G00810 | 2 | |
| Populus trichocarpa | Tree-based ortholog | 1-to-1 | PT02G16520 | 1 | |
| Anchor point | 1-to-1 | PT02G16520 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PT14G09100 PT02G16520 | 2 | ||
| Prunus persica | Tree-based ortholog | 1-to-1 | PPE_002G03140 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PPE_002G17330 | 1 | ||
| Ricinus communis | Tree-based ortholog | 1-to-1 | RC29686G00070 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | RC29686G00070 | 1 | ||
| Solanum lycopersicum | Tree-based ortholog | 1-to-many | SL10G081790 SL01G006910 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | SL01G095180 | 1 | ||
| Solanum tuberosum | Tree-based ortholog | 1-to-1 | ST10G026320 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ST01G032620 | 1 | ||
| Thellungiella parvula | Orthologous gene family | 1-to-1 | TP4G28220 | 1 | |
| Tree-based ortholog | 1-to-1 | TP4G28220 | 1 | ||
| Anchor point | 1-to-1 | TP4G28220 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TP4G28220 | 1 | ||
| Theobroma cacao | Tree-based ortholog | 1-to-1 | TC0001G34090 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TC0001G34870 | 1 | ||
| Vitis vinifera | Tree-based ortholog | 1-to-1 | VV13G12230 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | VV15G05380 | 1 | ||
| Zea mays | Best-Hits-and-Inparalogs(BHI)family | 1-to-many | ZM06G29060 ZM10G08260 | 2 | |