Integrative Orthology Viewer: AL4G32000 (Arabidopsis lyrata)
Inparalogs
Organism | Source | Genes | #genes | Details |
---|---|---|---|---|
Arabidopsis lyrata | Orthologous gene family | AL4G32000 AL5G30680 | 2 | |
Tree-based ortholog | AL4G32000 | 1 | ||
Anchor point | AL5G30680 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | AL4G32000 | 1 |
Orthologs
Organism | Source | Type | Genes | #genes | Details |
---|---|---|---|---|---|
Amborella trichopoda | Orthologous gene family | many-to-1 | ATR_00133G00450 | 1 | |
Tree-based ortholog | 1-to-1 | ATR_00133G00450 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ATR_00133G00450 | 1 | ||
Arabidopsis thaliana | Orthologous gene family | many-to-many | AT2G44280 AT3G60070 | 2 | |
Tree-based ortholog | 1-to-1 | AT2G44280 | 1 | ||
Anchor point | 1-to-many | AT2G44280 AT3G60070 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AT2G44280 | 1 | ||
Beta vulgaris | Orthologous gene family | many-to-1 | BV0G61750 | 1 | |
Tree-based ortholog | 1-to-1 | BV0G61750 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BV0G61750 | 1 | ||
Brassica rapa | Orthologous gene family | many-to-many | BR04G01700 BR04G26470 BR05G04130 | 3 | |
Tree-based ortholog | 1-to-1 | BR05G04130 | 1 | ||
Anchor point | 1-to-many | BR04G01700 BR04G26470 BR05G04130 | 3 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BR05G04130 | 1 | ||
Capsella rubella | Orthologous gene family | many-to-many | CRU_004G25900 CRU_005G25400 | 2 | |
Tree-based ortholog | 1-to-1 | CRU_004G25900 | 1 | ||
Anchor point | 1-to-many | CRU_005G25400 CRU_004G25900 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CRU_004G25900 | 1 | ||
Carica papaya | Orthologous gene family | many-to-1 | CP29747G00010 | 1 | |
Tree-based ortholog | 1-to-1 | CP29747G00010 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CP29747G00010 | 1 | ||
Citrullus lanatus | Orthologous gene family | many-to-1 | CL09G03280 | 1 | |
Tree-based ortholog | 1-to-1 | CL09G03280 | 1 | ||
Anchor point | 1-to-1 | CL09G03280 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CL09G03280 | 1 | ||
Citrus sinensis | Orthologous gene family | many-to-1 | CS00356G00060 | 1 | |
Tree-based ortholog | 1-to-1 | CS00356G00060 | 1 | ||
Anchor point | 1-to-1 | CS00356G00060 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CS00356G00060 | 1 | ||
Cucumis melo | Orthologous gene family | many-to-many | CM00060G01480 CM32150G00010 | 2 | |
Tree-based ortholog | 1-to-many | CM00060G01480 CM32150G00010 | 2 | ||
Anchor point | 1-to-1 | CM00060G01480 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CM00060G01480 | 1 | ||
Eucalyptus grandis | Orthologous gene family | many-to-1 | EG0005G32860 | 1 | |
Tree-based ortholog | 1-to-1 | EG0005G32860 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | EG0005G32860 | 1 | ||
Fragaria vesca | Orthologous gene family | many-to-1 | FV7G01250 | 1 | |
Tree-based ortholog | 1-to-1 | FV7G01250 | 1 | ||
Anchor point | 1-to-1 | FV7G01250 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | FV7G01250 | 1 | ||
Glycine max | Orthologous gene family | many-to-many | GM08G16870 GM15G42210 | 2 | |
Tree-based ortholog | 1-to-1 | GM20G22351 | 1 | ||
Anchor point | 1-to-1 | GM15G42210 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | GM15G42210 GM08G16870 | 2 | ||
Gossypium raimondii | Orthologous gene family | many-to-1 | GR04G03500 | 1 | |
Tree-based ortholog | 1-to-1 | GR04G03500 | 1 | ||
Anchor point | 1-to-1 | GR04G03500 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | GR04G03500 | 1 | ||
Malus domestica | Orthologous gene family | many-to-1 | MD02G030080 | 1 | |
Tree-based ortholog | 1-to-many | MD02G030080 MD00G104610 | 2 | ||
Anchor point | 1-to-1 | MD02G030080 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | MD02G030080 | 1 | ||
Manihot esculenta | Orthologous gene family | many-to-1 | ME01508G00100 | 1 | |
Tree-based ortholog | 1-to-1 | ME01508G00100 | 1 | ||
Anchor point | 1-to-1 | ME01508G00100 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ME01508G00100 | 1 | ||
Medicago truncatula | Orthologous gene family | many-to-1 | MT2G062270 | 1 | |
Tree-based ortholog | 1-to-1 | MT2G062270 | 1 | ||
Anchor point | 1-to-1 | MT2G062270 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | MT2G062270 | 1 | ||
Oryza sativa ssp. japonica | Orthologous gene family | many-to-many | OS03G07170 OS07G39010 | 2 | |
Tree-based ortholog | 1-to-many | OS03G07170 OS07G39010 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OS07G39010 | 1 | ||
Physcomitrella patens | Orthologous gene family | many-to-1 | PP00105G00210 | 1 | |
Tree-based ortholog | 1-to-1 | PP00105G00210 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PP00105G00210 | 1 | ||
Populus trichocarpa | Orthologous gene family | many-to-many | PT01G23150 PT01G23210 PT09G02460 | 3 | |
Tree-based ortholog | 1-to-many | PT01G23210 PT01G23150 PT09G02460 | 3 | ||
Anchor point | 1-to-many | PT09G02460 PT01G23150 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PT09G02460 PT01G23210 PT01G23150 | 3 | ||
Prunus persica | Orthologous gene family | many-to-1 | PPE_002G08150 | 1 | |
Tree-based ortholog | 1-to-1 | PPE_002G08150 | 1 | ||
Anchor point | 1-to-1 | PPE_002G08150 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PPE_002G08150 | 1 | ||
Ricinus communis | Orthologous gene family | many-to-1 | RC30226G00640 | 1 | |
Tree-based ortholog | 1-to-1 | RC30226G00640 | 1 | ||
Anchor point | 1-to-1 | RC30226G00640 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | RC30226G00640 | 1 | ||
Solanum lycopersicum | Orthologous gene family | many-to-1 | SL01G073660 | 1 | |
Tree-based ortholog | 1-to-many | SL01G073670 SL01G073660 SL01G089990 | 3 | ||
Anchor point | 1-to-1 | SL01G073660 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | SL01G073660 | 1 | ||
Solanum tuberosum | Orthologous gene family | many-to-1 | ST01G027460 | 1 | |
Tree-based ortholog | 1-to-many | ST01G027450 ST10G013020 ST10G013170 ... | 4 | ||
Anchor point | 1-to-1 | ST01G027450 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ST01G027460 | 1 | ||
Thellungiella parvula | Orthologous gene family | many-to-many | TP4G26350 TP5G03140 | 2 | |
Tree-based ortholog | 1-to-1 | TP4G26350 | 1 | ||
Anchor point | 1-to-many | TP5G03140 TP4G26350 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TP4G26350 | 1 | ||
Theobroma cacao | Orthologous gene family | many-to-1 | TC0008G19370 | 1 | |
Tree-based ortholog | 1-to-1 | TC0008G19370 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TC0008G19370 | 1 | ||
Vitis vinifera | Orthologous gene family | many-to-1 | VV13G00540 | 1 | |
Tree-based ortholog | 1-to-1 | VV13G00540 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | VV13G00540 | 1 | ||
Zea mays | Orthologous gene family | many-to-many | ZM07G25330 ZM09G27930 | 2 | |
Tree-based ortholog | 1-to-many | ZM09G27930 ZM07G25330 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ZM07G25330 | 1 |