Integrative Orthology Viewer: AL4G25890 (Arabidopsis lyrata)
Inparalogs
Organism | Source | Genes | #genes | Details |
---|---|---|---|---|
Arabidopsis lyrata | Orthologous gene family | AL4G25890 AL5G25340 | 2 | |
Tree-based ortholog | AL4G25890 | 1 | ||
Anchor point | AL5G25340 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | AL4G25890 | 1 |
Orthologs
Organism | Source | Type | Genes | #genes | Details |
---|---|---|---|---|---|
Amborella trichopoda | Orthologous gene family | many-to-1 | ATR_00034G01230 | 1 | |
Tree-based ortholog | 1-to-many | ATR_00039G00060 ATR_00034G01200 ATR_00034G01220 ... | 4 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | ATR_00034G01200 ATR_00034G01230 | 2 | ||
Arabidopsis thaliana | Orthologous gene family | many-to-many | AT2G39430 AT3G55230 | 2 | |
Tree-based ortholog | 1-to-1 | AT2G39430 | 1 | ||
Anchor point | 1-to-many | AT2G39430 AT2G28670 AT1G07730 ... | 4 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AT2G39430 | 1 | ||
Beta vulgaris | Orthologous gene family | many-to-1 | BV0G07050 | 1 | |
Tree-based ortholog | 1-to-1 | BV0G07050 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BV0G07050 | 1 | ||
Brassica rapa | Orthologous gene family | many-to-many | BR03G19810 BR04G04220 BR04G23410 ... | 4 | |
Tree-based ortholog | 1-to-many | BR04G23410 BR03G19810 BR05G06310 | 3 | ||
Anchor point | 1-to-many | BR08G30040 BR04G23410 BR05G06310 ... | 5 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | BR05G06310 BR03G19810 | 2 | ||
Capsella rubella | Orthologous gene family | many-to-1 | CRU_004G20780 | 1 | |
Tree-based ortholog | 1-to-1 | CRU_004G20780 | 1 | ||
Anchor point | 1-to-1 | CRU_004G20780 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CRU_004G20780 | 1 | ||
Carica papaya | Orthologous gene family | many-to-1 | CP00001G03150 | 1 | |
Tree-based ortholog | 1-to-1 | CP00001G03150 | 1 | ||
Anchor point | 1-to-1 | CP00001G03130 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CP00001G03150 | 1 | ||
Citrullus lanatus | Orthologous gene family | many-to-1 | CL02G13820 | 1 | |
Tree-based ortholog | 1-to-many | CL03G04220 CL02G13820 | 2 | ||
Anchor point | 1-to-1 | CL02G13820 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CL02G13820 | 1 | ||
Citrus sinensis | Orthologous gene family | many-to-many | CS00014G01060 CS07183G00010 | 2 | |
Tree-based ortholog | 1-to-many | CS07183G00010 CS00014G01060 | 2 | ||
Anchor point | 1-to-many | CS00014G01050 CS00024G01300 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CS07183G00010 | 1 | ||
Cucumis melo | Orthologous gene family | many-to-1 | CM00063G00250 | 1 | |
Tree-based ortholog | 1-to-many | CM00001G05220 CM00063G00250 | 2 | ||
Anchor point | 1-to-1 | CM00063G00240 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CM00063G00250 | 1 | ||
Eucalyptus grandis | Orthologous gene family | many-to-many | EG0007G21720 EG0010G10290 | 2 | |
Tree-based ortholog | 1-to-many | EG0007G21720 EG0010G10290 | 2 | ||
Anchor point | 1-to-1 | EG0007G21720 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | EG0010G10290 | 1 | ||
Fragaria vesca | Orthologous gene family | many-to-1 | FV7G25450 | 1 | |
Tree-based ortholog | 1-to-1 | FV7G25450 | 1 | ||
Anchor point | 1-to-many | FV0G32270 FV7G25440 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | FV7G25450 | 1 | ||
Glycine max | Orthologous gene family | many-to-many | GM08G28974 GM18G51880 | 2 | |
Tree-based ortholog | 1-to-many | GM08G28974 GM18G51880 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | GM08G28974 GM18G51880 | 2 | ||
Gossypium raimondii | Orthologous gene family | many-to-1 | GR11G24590 | 1 | |
Tree-based ortholog | 1-to-1 | GR11G24590 | 1 | ||
Anchor point | 1-to-many | GR09G31680 GR11G24580 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | GR11G24590 | 1 | ||
Lotus japonicus | Orthologous gene family | many-to-1 | LJ5G040810 | 1 | |
Tree-based ortholog | 1-to-1 | LJ5G040810 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | LJ5G040810 | 1 | ||
Malus domestica | Orthologous gene family | many-to-many | MD00G119040 MD00G305540 | 2 | |
Tree-based ortholog | 1-to-many | MD00G119040 MD00G305540 MD00G477000 | 3 | ||
Anchor point | 1-to-1 | MD11G008730 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | MD00G119040 MD00G305540 | 2 | ||
Manihot esculenta | Orthologous gene family | many-to-1 | ME12004G00030 | 1 | |
Tree-based ortholog | 1-to-many | ME12004G00030 ME03606G00040 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | ME12004G00020 ME03606G00030 | 2 | ||
Medicago truncatula | Orthologous gene family | many-to-many | MT1G115510 MT7G021300 | 2 | |
Tree-based ortholog | 1-to-many | MT7G021300 MT1G115510 | 2 | ||
Anchor point | 1-to-1 | MT1G115510 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | MT1G115510 | 1 | ||
Oryza sativa ssp. japonica | Orthologous gene family | many-to-1 | OS03G17220 | 1 | |
Tree-based ortholog | 1-to-1 | OS03G17220 | 1 | ||
Anchor point | 1-to-1 | OS01G62030 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OS03G17220 | 1 | ||
Physcomitrella patens | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PP00005G00770 | 1 | |
Populus trichocarpa | Orthologous gene family | many-to-many | PT08G04910 PT10G21190 | 2 | |
Tree-based ortholog | 1-to-many | PT08G04910 PT10G21190 | 2 | ||
Anchor point | 1-to-many | PT10G21180 PT08G04910 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PT10G21190 PT08G04910 | 2 | ||
Prunus persica | Orthologous gene family | many-to-1 | PPE_002G21870 | 1 | |
Tree-based ortholog | 1-to-1 | PPE_002G21870 | 1 | ||
Anchor point | 1-to-1 | PPE_002G21860 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PPE_002G21870 | 1 | ||
Ricinus communis | Orthologous gene family | many-to-1 | RC29679G00020 | 1 | |
Tree-based ortholog | 1-to-1 | RC29679G00020 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | RC29679G00020 | 1 | ||
Solanum lycopersicum | Orthologous gene family | many-to-1 | SL04G010270 | 1 | |
Tree-based ortholog | 1-to-many | SL04G010270 SL05G054780 | 2 | ||
Anchor point | 1-to-1 | SL05G054780 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | SL04G010270 | 1 | ||
Solanum tuberosum | Orthologous gene family | many-to-1 | ST04G009680 | 1 | |
Tree-based ortholog | 1-to-many | ST04G009680 ST05G027840 | 2 | ||
Anchor point | 1-to-many | ST04G009680 ST05G027840 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ST04G009680 | 1 | ||
Thellungiella parvula | Orthologous gene family | many-to-1 | TP5G07230 | 1 | |
Tree-based ortholog | 1-to-1 | TP5G07230 | 1 | ||
Anchor point | 1-to-many | TP5G07230 TP1G06460 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TP5G07230 | 1 | ||
Theobroma cacao | Orthologous gene family | many-to-1 | TC0010G05570 | 1 | |
Tree-based ortholog | 1-to-1 | TC0010G05570 | 1 | ||
Anchor point | 1-to-1 | TC0010G05560 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TC0010G05570 | 1 | ||
Vitis vinifera | Orthologous gene family | many-to-1 | VV00G14830 | 1 | |
Tree-based ortholog | 1-to-1 | VV00G14830 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | VV00G14830 | 1 | ||
Zea mays | Orthologous gene family | many-to-1 | ZM09G23550 | 1 | |
Tree-based ortholog | 1-to-1 | ZM09G23550 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ZM09G23550 | 1 |