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Integrative Orthology Viewer:
AL4G20880
(Arabidopsis lyrata)
Inparalogs
| Organism | Source | Genes | #genes | Details |
|---|---|---|---|---|
| Arabidopsis lyrata | Orthologous gene family | AL1G33490 AL4G20880 | 2 |  |
| Tree-based ortholog | AL4G20880 | 1 | ||
| Anchor point | AL1G33490 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | AL4G20880 | 1 |
Orthologs
| Organism | Source | Type | Genes | #genes | Details |
|---|---|---|---|---|---|
| Amborella trichopoda | Orthologous gene family | many-to-many | ATR_00024G00230 ATR_00048G00660 | 2 | |
| Tree-based ortholog | 1-to-1 | ATR_00033G00570 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | ATR_00048G00660 ATR_00024G00230 | 2 | ||
| Arabidopsis thaliana | Orthologous gene family | many-to-many | AT1G32230 AT2G35510 | 2 | |
| Tree-based ortholog | 1-to-1 | AT2G35510 | 1 | ||
| Anchor point | 1-to-many | AT1G32230 AT2G35510 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AT2G35510 | 1 | ||
| Beta vulgaris | Orthologous gene family | many-to-1 | BV2G17260 | 1 | |
| Tree-based ortholog | 1-to-1 | BV2G17260 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BV2G17260 | 1 | ||
| Brassica rapa | Orthologous gene family | many-to-many | BR04G21010 BR05G09220 BR08G08690 ... | 4 | |
| Tree-based ortholog | 1-to-many | BR05G09220 BR04G21010 | 2 | ||
| Anchor point | 1-to-many | BR04G21010 BR05G09220 BR09G26670 | 3 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BR04G21010 | 1 | ||
| Capsella rubella | Orthologous gene family | many-to-many | CRU_001G29130 CRU_004G16610 | 2 | |
| Tree-based ortholog | 1-to-1 | CRU_004G16610 | 1 | ||
| Anchor point | 1-to-many | CRU_004G16610 CRU_001G29130 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CRU_004G16610 | 1 | ||
| Carica papaya | Orthologous gene family | many-to-1 | CP00208G00090 | 1 | |
| Tree-based ortholog | 1-to-many | CP00208G00080 CP00208G00090 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CP00208G00090 | 1 | ||
| Citrullus lanatus | Orthologous gene family | many-to-many | CL09G11120 CL10G00820 | 2 | |
| Tree-based ortholog | 1-to-1 | CL09G11120 | 1 | ||
| Anchor point | 1-to-1 | CL10G00820 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CL10G00820 | 1 | ||
| Citrus sinensis | Orthologous gene family | many-to-1 | CS00212G00080 | 1 | |
| Tree-based ortholog | 1-to-1 | CS00212G00080 | 1 | ||
| Anchor point | 1-to-1 | CS00212G00080 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CS00212G00080 | 1 | ||
| Cucumis melo | Orthologous gene family | many-to-many | CM00021G01310 CM01596G01500 | 2 | |
| Tree-based ortholog | 1-to-1 | CM01596G01500 | 1 | ||
| Anchor point | 1-to-many | CM00021G01310 CM01596G01500 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CM00021G01310 | 1 | ||
| Eucalyptus grandis | Orthologous gene family | many-to-1 | EG0005G02080 | 1 | |
| Tree-based ortholog | 1-to-1 | EG0005G02080 | 1 | ||
| Anchor point | 1-to-1 | EG0005G02080 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | EG0005G02080 | 1 | ||
| Fragaria vesca | Orthologous gene family | many-to-many | FV0G29710 FV0G29730 | 2 | |
| Tree-based ortholog | 1-to-many | FV0G29710 FV0G29730 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | FV0G29730 FV0G29710 | 2 | ||
| Glycine max | Orthologous gene family | many-to-many | GM01G01900 GM01G01920 GM09G34000 | 3 | |
| Tree-based ortholog | 1-to-many | GM01G01920 GM01G01900 GM09G34000 | 3 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | GM09G34000 GM01G01900 GM01G01920 | 3 | ||
| Gossypium raimondii | Orthologous gene family | many-to-many | GR04G18240 GR08G22420 | 2 | |
| Tree-based ortholog | 1-to-many | GR08G13040 GR04G18240 GR08G22420 | 3 | ||
| Anchor point | 1-to-many | GR08G22420 GR04G18240 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | GR08G22420 GR04G18240 | 2 | ||
| Lotus japonicus | Orthologous gene family | many-to-many | LJ1G054740 LJ2G026460 LJ3G002210 ... | 4 | |
| Tree-based ortholog | 1-to-many | LJ3G002230 LJ3G002210 LJ5G005770 ... | 7 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | LJ4G018090 LJ1G054740 | 2 | ||
| Malus domestica | Orthologous gene family | many-to-many | MD02G024610 MD07G005090 | 2 | |
| Tree-based ortholog | 1-to-many | MD07G005090 MD02G024610 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | MD02G024610 MD07G005090 | 2 | ||
| Manihot esculenta | Orthologous gene family | many-to-many | ME00999G00030 ME04321G00010 | 2 | |
| Tree-based ortholog | 1-to-many | ME04321G00010 ME00999G00030 ME07070G00050 | 3 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | ME04321G00010 ME00999G00030 | 2 | ||
| Medicago truncatula | Orthologous gene family | many-to-many | MT1G112330 MT5G032190 MT7G011550 | 3 | |
| Tree-based ortholog | 1-to-many | MT2G090130 MT5G029580 MT7G011550 ... | 6 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | MT1G112330 MT5G032190 | 2 | ||
| Oryza sativa ssp. japonica | Orthologous gene family | many-to-1 | OS10G42710 | 1 | |
| Tree-based ortholog | 1-to-many | OS03G63770 OS10G42710 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OS10G42710 | 1 | ||
| Physcomitrella patens | Orthologous gene family | many-to-many | PP00030G00450 PP00215G00260 PP00341G00100 | 3 | |
| Tree-based ortholog | 1-to-many | PP00215G00260 PP00341G00100 PP00030G00450 | 3 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PP00215G00260 PP00341G00100 PP00030G00450 | 3 | ||
| Populus trichocarpa | Orthologous gene family | many-to-many | PT01G13720 PT03G09670 | 2 | |
| Tree-based ortholog | 1-to-many | PT01G13720 PT03G09670 | 2 | ||
| Anchor point | 1-to-1 | PT03G09670 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PT03G09670 PT01G13720 | 2 | ||
| Prunus persica | Orthologous gene family | many-to-1 | PPE_004G28400 | 1 | |
| Tree-based ortholog | 1-to-1 | PPE_004G28400 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PPE_004G28400 | 1 | ||
| Ricinus communis | Orthologous gene family | many-to-1 | RC30068G01410 | 1 | |
| Tree-based ortholog | 1-to-many | RC30068G01410 RC29740G00070 | 2 | ||
| Anchor point | 1-to-1 | RC30068G01410 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | RC30068G01410 | 1 | ||
| Solanum lycopersicum | Orthologous gene family | many-to-many | SL06G066330 SL08G005270 SL08G076420 | 3 | |
| Tree-based ortholog | 1-to-many | SL06G066330 SL08G076420 | 2 | ||
| Anchor point | 1-to-many | SL08G005270 SL08G076420 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | SL08G005270 | 1 | ||
| Solanum tuberosum | Orthologous gene family | many-to-many | ST06G022710 ST08G008700 ST08G021880 | 3 | |
| Tree-based ortholog | 1-to-many | ST06G022710 ST08G021880 | 2 | ||
| Anchor point | 1-to-1 | ST08G021880 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ST08G008700 | 1 | ||
| Thellungiella parvula | Orthologous gene family | many-to-many | TP1G27910 TP4G17730 | 2 | |
| Tree-based ortholog | 1-to-1 | TP4G17730 | 1 | ||
| Anchor point | 1-to-many | TP1G27910 TP4G17730 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TP4G17730 | 1 | ||
| Theobroma cacao | Orthologous gene family | many-to-1 | TC0003G30460 | 1 | |
| Tree-based ortholog | 1-to-1 | TC0003G30460 | 1 | ||
| Anchor point | 1-to-1 | TC0003G30460 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TC0003G30460 | 1 | ||
| Vitis vinifera | Orthologous gene family | many-to-1 | VV02G01820 | 1 | |
| Tree-based ortholog | 1-to-many | VV02G01820 VV02G01830 | 2 | ||
| Anchor point | 1-to-1 | VV02G01830 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | VV02G01820 | 1 | ||
| Zea mays | Orthologous gene family | many-to-many | ZM01G22650 ZM05G00270 ZM05G12830 | 3 | |
| Tree-based ortholog | 1-to-many | ZM05G00270 ZM01G22650 ZM05G12830 | 3 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | ZM01G22650 ZM05G12830 | 2 |