Integrative Orthology Viewer: AL4G19300 (Arabidopsis lyrata)
Inparalogs
Organism | Source | Genes | #genes | Details |
---|---|---|---|---|
Arabidopsis lyrata | Orthologous gene family | AL4G19300 | 1 | |
Tree-based ortholog | AL4G19300 | 1 | ||
Anchor point | AL1G29910 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | AL4G19300 | 1 |
Orthologs
Organism | Source | Type | Genes | #genes | Details |
---|---|---|---|---|---|
Amborella trichopoda | Tree-based ortholog | 1-to-1 | ATR_00021G01180 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ATR_00021G01180 | 1 | ||
Arabidopsis thaliana | Orthologous gene family | 1-to-many | AT1G29025 AT2G34030 | 2 | |
Tree-based ortholog | 1-to-1 | AT2G34020 | 1 | ||
Anchor point | 1-to-many | AT2G34020 AT1G29020 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AT2G34020 | 1 | ||
Beta vulgaris | Tree-based ortholog | 1-to-1 | BV4G15790 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BV4G15790 | 1 | ||
Brassica rapa | Tree-based ortholog | 1-to-1 | BR03G16950 | 1 | |
Anchor point | 1-to-many | BR03G16950 BR04G20280 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BR03G16950 | 1 | ||
Capsella rubella | Orthologous gene family | 1-to-1 | CRU_001G26080 | 1 | |
Tree-based ortholog | 1-to-1 | CRU_004G15160 | 1 | ||
Anchor point | 1-to-many | CRU_001G26080 CRU_004G15160 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CRU_004G15160 | 1 | ||
Carica papaya | Tree-based ortholog | 1-to-1 | CP00131G00760 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CP00131G00720 | 1 | ||
Citrullus lanatus | Tree-based ortholog | 1-to-1 | CL11G11610 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CL11G11610 | 1 | ||
Citrus sinensis | Tree-based ortholog | 1-to-many | CS00076G00050 CS00365G00100 | 2 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CS00076G00050 | 1 | ||
Cucumis melo | Tree-based ortholog | 1-to-1 | CM00081G00410 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CM00081G00410 | 1 | ||
Eucalyptus grandis | Tree-based ortholog | 1-to-many | EG0006G09640 EG0006G09650 EG0006G09630 ... | 4 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | EG0006G09660 EG0006G27840 | 2 | ||
Fragaria vesca | Tree-based ortholog | 1-to-1 | FV3G18090 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | FV6G22380 | 1 | ||
Glycine max | Tree-based ortholog | 1-to-many | GM12G35670 GM13G34750 GM13G34731 | 3 | |
Anchor point | 1-to-1 | GM12G35670 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | GM13G34720 | 1 | ||
Gossypium raimondii | Tree-based ortholog | 1-to-many | GR07G32580 GR02G06480 | 2 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | GR07G32580 | 1 | ||
Malus domestica | Tree-based ortholog | 1-to-many | MD11G023350 MD00G409650 MD03G020680 | 3 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | MD03G020710 | 1 | ||
Manihot esculenta | Tree-based ortholog | 1-to-1 | ME04851G00820 | 1 | |
Anchor point | 1-to-1 | ME04851G00820 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ME03741G00680 | 1 | ||
Medicago truncatula | Tree-based ortholog | 1-to-many | MT2G078350 MT2G078340 | 2 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | MT2G078240 | 1 | ||
Oryza sativa ssp. japonica | Tree-based ortholog | 1-to-many | OS02G14980 OS01G11414 | 2 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | OS02G14980 OS01G11414 | 2 | ||
Physcomitrella patens | Tree-based ortholog | 1-to-many | PP00006G01550 PP00001G02970 PP00052G00890 ... | 4 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PP00052G00890 PP00001G02970 PP00006G01550 | 3 | ||
Populus trichocarpa | Tree-based ortholog | 1-to-many | PT01G37540 PT01G37530 | 2 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PT01G37540 PT01G37530 | 2 | ||
Prunus persica | Tree-based ortholog | 1-to-1 | PPE_004G16430 | 1 | |
Anchor point | 1-to-1 | PPE_004G05400 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PPE_004G05400 | 1 | ||
Ricinus communis | Tree-based ortholog | 1-to-1 | RC29900G00330 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | RC29646G00520 | 1 | ||
Solanum lycopersicum | Tree-based ortholog | 1-to-many | SL04G039960 SL03G006260 SL02G077270 | 3 | |
Anchor point | 1-to-1 | SL03G006260 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | SL07G062700 | 1 | ||
Solanum tuberosum | Tree-based ortholog | 1-to-many | ST04G014860 ST03G007320 ST02G020090 | 3 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ST04G014860 | 1 | ||
Thellungiella parvula | Tree-based ortholog | 1-to-1 | TP4G16370 | 1 | |
Anchor point | 1-to-many | TP4G16370 TP1G24950 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TP4G16370 | 1 | ||
Theobroma cacao | Tree-based ortholog | 1-to-many | TC0007G09620 TC0007G09660 | 2 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TC0007G09680 | 1 | ||
Vitis vinifera | Tree-based ortholog | 1-to-1 | VV19G02140 | 1 | |
Anchor point | 1-to-1 | VV10G01810 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | VV12G02460 | 1 | ||
Zea mays | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ZM05G25930 | 1 |