Integrative Orthology Viewer: AL4G18170 (Arabidopsis lyrata)
Inparalogs
Organism | Source | Genes | #genes | Details |
---|---|---|---|---|
Arabidopsis lyrata | Orthologous gene family | AL0G06530 AL1G42750 AL2G00450 ... | 8 | |
Tree-based ortholog | AL0G06530 AL4G18170 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | AL4G18170 AL0G06530 | 2 |
Orthologs
Organism | Source | Type | Genes | #genes | Details |
---|---|---|---|---|---|
Amborella trichopoda | Orthologous gene family | many-to-many | ATR_00029G00790 ATR_00112G00090 ATR_00112G00110 ... | 4 | |
Tree-based ortholog | many-to-many | ATR_00112G00090 ATR_00112G00110 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-many | ATR_00112G00110 ATR_00112G00090 | 2 | ||
Arabidopsis thaliana | Orthologous gene family | many-to-many | AT1G48930 AT1G64390 AT2G32990 ... | 8 | |
Tree-based ortholog | many-to-1 | AT2G32990 | 1 | ||
Anchor point | N/A | AT2G32990 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | AT2G32990 | 1 | ||
Beta vulgaris | Orthologous gene family | many-to-many | BV5G06050 BV6G24070 BV9G10730 ... | 4 | |
Tree-based ortholog | many-to-1 | BV6G24070 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | BV6G24070 | 1 | ||
Brassica rapa | Orthologous gene family | many-to-many | BR03G22020 BR03G25800 BR04G19590 ... | 11 | |
Tree-based ortholog | many-to-many | BR05G11210 BR04G19590 | 2 | ||
Anchor point | N/A | BR04G19590 BR05G11210 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | BR05G11210 | 1 | ||
Capsella rubella | Orthologous gene family | many-to-many | CRU_001G36140 CRU_002G00380 CRU_003G29100 ... | 6 | |
Tree-based ortholog | many-to-1 | CRU_004G13980 | 1 | ||
Anchor point | N/A | CRU_004G13980 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CRU_004G13980 | 1 | ||
Carica papaya | Orthologous gene family | many-to-many | CP00012G02570 CP00019G00030 | 2 | |
Tree-based ortholog | many-to-1 | CP00132G00130 | 1 | ||
Anchor point | N/A | CP00132G00130 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CP00132G00130 | 1 | ||
Chlamydomonas reinhardtii | Tree-based ortholog | many-to-many | CR17G07600 CR17G07580 CR06G04900 | 3 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-many | CR06G04900 CR17G07580 CR17G07600 | 3 | ||
Citrullus lanatus | Orthologous gene family | many-to-many | CL06G00760 CL09G04200 CL09G10740 ... | 4 | |
Tree-based ortholog | many-to-1 | CL09G10740 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CL09G10740 | 1 | ||
Citrus sinensis | Orthologous gene family | many-to-many | CS00009G02160 CS00049G00350 CS00126G00120 ... | 4 | |
Tree-based ortholog | many-to-1 | CS00126G00120 | 1 | ||
Anchor point | N/A | CS00126G00120 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CS00126G00120 | 1 | ||
Cucumis melo | Orthologous gene family | many-to-many | CM00021G05140 CM00022G02530 CM00052G02500 ... | 4 | |
Tree-based ortholog | many-to-1 | CM00022G02530 | 1 | ||
Anchor point | N/A | CM00022G02530 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CM00022G02530 | 1 | ||
Eucalyptus grandis | Orthologous gene family | many-to-many | EG0005G13990 EG0005G14010 EG0005G14020 ... | 6 | |
Tree-based ortholog | many-to-1 | EG0011G06440 | 1 | ||
Anchor point | N/A | EG0011G06440 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | EG0011G06440 | 1 | ||
Fragaria vesca | Orthologous gene family | many-to-many | FV0G33330 FV3G26000 FV4G23520 ... | 5 | |
Tree-based ortholog | many-to-1 | FV6G39860 | 1 | ||
Anchor point | N/A | FV6G39860 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | FV6G39860 | 1 | ||
Glycine max | Orthologous gene family | many-to-many | GM02G43680 GM02G46320 GM11G10760 ... | 7 | |
Tree-based ortholog | many-to-many | GM14G05200 GM02G43680 | 2 | ||
Anchor point | N/A | GM02G46320 GM02G43680 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | GM02G43680 | 1 | ||
Gossypium raimondii | Orthologous gene family | many-to-many | GR01G09570 GR02G09240 GR03G08080 ... | 7 | |
Tree-based ortholog | many-to-many | GR07G17060 GR01G09570 | 2 | ||
Anchor point | N/A | GR07G17060 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | GR01G09570 | 1 | ||
Lotus japonicus | Orthologous gene family | many-to-many | LJ2G000880 LJ4G046760 LJ6G012580 | 3 | |
Tree-based ortholog | many-to-1 | LJ6G012580 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | LJ4G046760 | 1 | ||
Malus domestica | Orthologous gene family | many-to-many | MD00G223220 MD00G249450 MD00G269960 ... | 11 | |
Tree-based ortholog | many-to-many | MD00G435050 MD09G008140 MD17G008970 | 3 | ||
Anchor point | N/A | MD17G008970 MD09G008140 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-many | MD00G435050 MD17G008970 MD09G008140 | 3 | ||
Manihot esculenta | Orthologous gene family | many-to-many | ME02224G00010 ME03175G00210 ME03332G00040 ... | 6 | |
Tree-based ortholog | many-to-many | ME05214G00310 ME03667G00080 | 2 | ||
Anchor point | N/A | ME05214G00310 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | ME03667G00080 | 1 | ||
Medicago truncatula | Orthologous gene family | many-to-many | MT1G037340 MT3G080190 MT4G074960 ... | 6 | |
Tree-based ortholog | many-to-many | MT5G085730 MT3G080190 | 2 | ||
Anchor point | N/A | MT5G085730 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | MT5G085730 | 1 | ||
Oryza sativa ssp. japonica | Orthologous gene family | many-to-many | OS01G12030 OS01G12070 OS02G05744 ... | 9 | |
Tree-based ortholog | many-to-many | OS02G05744 OS02G50490 OS06G13830 ... | 5 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | OS02G50490 | 1 | ||
Physcomitrella patens | Orthologous gene family | many-to-many | PP00037G01710 PP00053G00510 PP00149G00070 ... | 4 | |
Tree-based ortholog | many-to-many | PP00037G01710 PP00149G00070 PP00053G00510 ... | 4 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-many | PP00053G00510 PP00037G01710 PP00176G00580 ... | 4 | ||
Populus trichocarpa | Orthologous gene family | many-to-many | PT01G09220 PT01G35600 PT02G22520 ... | 6 | |
Tree-based ortholog | many-to-many | PT02G22520 PT14G15760 | 2 | ||
Anchor point | N/A | PT01G35600 PT14G15760 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | PT14G15760 | 1 | ||
Prunus persica | Orthologous gene family | many-to-many | PPE_002G11550 PPE_004G21190 | 2 | |
Tree-based ortholog | many-to-1 | PPE_003G19170 | 1 | ||
Anchor point | N/A | PPE_003G19170 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | PPE_003G19170 | 1 | ||
Ricinus communis | Orthologous gene family | many-to-many | RC29675G00010 RC29762G00260 RC29948G00180 | 3 | |
Tree-based ortholog | many-to-1 | RC29948G00180 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | RC29948G00180 | 1 | ||
Solanum lycopersicum | Orthologous gene family | many-to-many | SL02G014220 SL05G052530 SL07G049300 ... | 6 | |
Tree-based ortholog | many-to-1 | SL07G049300 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | SL07G049300 | 1 | ||
Solanum tuberosum | Orthologous gene family | many-to-many | ST02G005370 ST05G025200 ST07G028980 ... | 4 | |
Tree-based ortholog | many-to-1 | ST07G018490 | 1 | ||
Anchor point | N/A | ST07G018490 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | ST07G018490 | 1 | ||
Thellungiella parvula | Orthologous gene family | many-to-many | TP1G35840 TP2G00340 TP4G15350 ... | 6 | |
Tree-based ortholog | many-to-1 | TP4G15350 | 1 | ||
Anchor point | N/A | TP4G15350 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | TP4G15350 | 1 | ||
Theobroma cacao | Orthologous gene family | many-to-many | TC0001G17600 TC0002G15460 TC0003G29220 ... | 4 | |
Tree-based ortholog | many-to-1 | TC0001G17600 | 1 | ||
Anchor point | N/A | TC0001G17600 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | TC0001G17600 | 1 | ||
Vitis vinifera | Orthologous gene family | many-to-many | VV01G08930 VV12G11320 VV13G10290 ... | 5 | |
Tree-based ortholog | many-to-1 | VV12G11320 | 1 | ||
Anchor point | N/A | VV12G11320 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | VV12G11320 | 1 | ||
Zea mays | Orthologous gene family | many-to-many | ZM05G19730 ZM05G39720 ZM07G13340 ... | 7 | |
Tree-based ortholog | many-to-many | ZM05G19730 ZM05G39720 ZM09G00230 ... | 5 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | ZM07G13340 | 1 |