Integrative Orthology Viewer: AL4G16550 (Arabidopsis lyrata)
Inparalogs
Organism | Source | Genes | #genes | Details |
---|---|---|---|---|
Arabidopsis lyrata | Orthologous gene family | AL1G05350 AL4G16550 | 2 | |
Tree-based ortholog | AL4G16550 | 1 | ||
Anchor point | AL1G05350 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | AL4G16550 | 1 |
Orthologs
Organism | Source | Type | Genes | #genes | Details |
---|---|---|---|---|---|
Amborella trichopoda | Tree-based ortholog | 1-to-1 | ATR_00049G00900 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ATR_00049G00900 | 1 | ||
Arabidopsis thaliana | Orthologous gene family | many-to-many | AT1G05830 AT2G31650 | 2 | |
Tree-based ortholog | 1-to-many | AT1G05830 AT2G31650 | 2 | ||
Anchor point | 1-to-many | AT2G31650 AT1G05830 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AT2G31650 | 1 | ||
Beta vulgaris | Tree-based ortholog | 1-to-1 | BV5G17380 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BV5G17380 | 1 | ||
Brassica rapa | Orthologous gene family | many-to-1 | BR04G18590 | 1 | |
Tree-based ortholog | 1-to-1 | BR04G18590 | 1 | ||
Anchor point | 1-to-1 | BR04G18590 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BR04G18590 | 1 | ||
Capsella rubella | Orthologous gene family | many-to-many | CRU_001G04860 CRU_004G12570 | 2 | |
Tree-based ortholog | 1-to-many | CRU_001G04860 CRU_004G12570 | 2 | ||
Anchor point | 1-to-many | CRU_001G04860 CRU_004G12570 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CRU_004G12570 | 1 | ||
Carica papaya | Tree-based ortholog | 1-to-1 | CP00050G01310 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CP00050G01310 | 1 | ||
Chlamydomonas reinhardtii | Tree-based ortholog | 1-to-1 | CR03G12190 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CR03G12190 | 1 | ||
Citrullus lanatus | Orthologous gene family | many-to-1 | CL00G06840 | 1 | |
Tree-based ortholog | 1-to-1 | CL00G06840 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CL00G06840 | 1 | ||
Citrus sinensis | Tree-based ortholog | 1-to-1 | CS00204G00140 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CS00204G00140 | 1 | ||
Cucumis melo | Tree-based ortholog | 1-to-1 | CM00088G00060 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CM00088G00060 | 1 | ||
Eucalyptus grandis | Tree-based ortholog | 1-to-1 | EG0008G03940 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | EG0008G03940 | 1 | ||
Fragaria vesca | Orthologous gene family | many-to-1 | FV4G08690 | 1 | |
Tree-based ortholog | 1-to-1 | FV4G08690 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | FV4G08690 | 1 | ||
Glycine max | Orthologous gene family | many-to-many | GM08G29010 GM18G51890 | 2 | |
Tree-based ortholog | 1-to-many | GM08G29010 GM18G51890 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | GM18G51890 GM08G29010 | 2 | ||
Gossypium raimondii | Tree-based ortholog | 1-to-1 | GR11G14400 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | GR11G14400 | 1 | ||
Lotus japonicus | Tree-based ortholog | 1-to-1 | LJ3G034580 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | LJ3G034580 | 1 | ||
Malus domestica | Orthologous gene family | many-to-1 | MD15G013380 | 1 | |
Tree-based ortholog | 1-to-1 | MD02G018480 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | MD15G013380 | 1 | ||
Manihot esculenta | Tree-based ortholog | 1-to-1 | ME00248G00050 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ME00248G00050 | 1 | ||
Medicago truncatula | Orthologous gene family | many-to-1 | MT7G021365 | 1 | |
Tree-based ortholog | 1-to-1 | MT7G021365 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | MT7G021365 | 1 | ||
Oryza sativa ssp. japonica | Orthologous gene family | many-to-1 | OS09G04890 | 1 | |
Tree-based ortholog | 1-to-1 | OS09G04890 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OS09G04890 | 1 | ||
Ostreococcus lucimarinus | Tree-based ortholog | 1-to-1 | OL08G03880 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OL08G03880 | 1 | ||
Physcomitrella patens | Orthologous gene family | many-to-1 | PP00081G00920 | 1 | |
Tree-based ortholog | 1-to-many | PP00081G00920 PP00093G00740 PP00282G00080 | 3 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PP00093G00740 PP00282G00080 | 2 | ||
Populus trichocarpa | Tree-based ortholog | 1-to-many | PT14G14630 PT02G23280 | 2 | |
Anchor point | 1-to-many | PT14G14630 PT02G23280 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PT14G14630 PT02G23280 | 2 | ||
Prunus persica | Tree-based ortholog | 1-to-1 | PPE_001G17050 | 1 | |
Anchor point | 1-to-1 | PPE_001G17050 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PPE_001G17050 | 1 | ||
Ricinus communis | Orthologous gene family | many-to-1 | RC29684G00080 | 1 | |
Tree-based ortholog | 1-to-1 | RC29684G00080 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | RC29684G00080 | 1 | ||
Solanum lycopersicum | Orthologous gene family | many-to-1 | SL09G098260 | 1 | |
Tree-based ortholog | 1-to-1 | SL09G098260 | 1 | ||
Anchor point | 1-to-1 | SL09G098260 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | SL09G098260 | 1 | ||
Solanum tuberosum | Orthologous gene family | many-to-1 | ST09G031390 | 1 | |
Tree-based ortholog | 1-to-1 | ST09G031390 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ST09G031390 | 1 | ||
Thellungiella parvula | Orthologous gene family | many-to-many | TP1G04640 TP4G14050 | 2 | |
Tree-based ortholog | 1-to-many | TP1G04640 TP4G14050 | 2 | ||
Anchor point | 1-to-many | TP1G04640 TP4G14050 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TP4G14050 | 1 | ||
Theobroma cacao | Tree-based ortholog | 1-to-1 | TC0004G18580 | 1 | |
Anchor point | 1-to-1 | TC0004G18580 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TC0004G18580 | 1 | ||
Vitis vinifera | Orthologous gene family | many-to-1 | VV05G01430 | 1 | |
Tree-based ortholog | 1-to-1 | VV05G01430 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | VV05G01430 | 1 | ||
Zea mays | Orthologous gene family | many-to-1 | ZM07G10000 | 1 | |
Tree-based ortholog | 1-to-1 | ZM07G10000 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ZM07G10000 | 1 |