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Integrative Orthology Viewer:
AL4G16300
(Arabidopsis lyrata)
Inparalogs
| Organism | Source | Genes | #genes | Details |
|---|---|---|---|---|
| Arabidopsis lyrata | Orthologous gene family | AL1G05530 AL1G05540 AL4G16300 ... | 4 |  |
| Tree-based ortholog | AL4G16300 | 1 | ||
| Anchor point | AL1G05530 AL5G29990 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | AL4G16300 | 1 |
Orthologs
| Organism | Source | Type | Genes | #genes | Details |
|---|---|---|---|---|---|
| Amborella trichopoda | Tree-based ortholog | 1-to-many | ATR_00006G02080 ATR_00006G02090 ATR_00001G03950 ... | 6 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ATR_00006G02090 | 1 | ||
| Arabidopsis thaliana | Orthologous gene family | many-to-many | AT1G06020 AT1G06030 AT2G31390 ... | 4 | |
| Tree-based ortholog | 1-to-1 | AT2G31390 | 1 | ||
| Anchor point | many-to-many | AT1G06020 AT2G31390 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AT2G31390 | 1 | ||
| Beta vulgaris | Tree-based ortholog | 1-to-1 | BV3G07650 | 1 | |
| Anchor point | many-to-1 | BV3G07650 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BV3G07650 | 1 | ||
| Brassica rapa | Orthologous gene family | many-to-many | BR03G15720 BR04G01950 BR04G18710 ... | 8 | |
| Tree-based ortholog | 1-to-many | BR03G15720 BR05G12620 BR04G18710 | 3 | ||
| Anchor point | many-to-many | BR03G15720 BR04G18710 BR10G01830 ... | 6 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BR05G12620 | 1 | ||
| Capsella rubella | Orthologous gene family | many-to-many | CRU_001G05040 CRU_004G12350 CRU_005G24810 | 3 | |
| Tree-based ortholog | 1-to-1 | CRU_004G12350 | 1 | ||
| Anchor point | many-to-many | CRU_001G05040 CRU_004G12350 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CRU_004G12350 | 1 | ||
| Carica papaya | Tree-based ortholog | 1-to-1 | CP00009G02870 | 1 | |
| Anchor point | many-to-1 | CP00009G02870 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CP00021G02270 | 1 | ||
| Chlamydomonas reinhardtii | Orthologous gene family | many-to-1 | CR13G00020 | 1 | |
| Tree-based ortholog | 1-to-1 | CR13G00020 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CR13G00020 | 1 | ||
| Citrullus lanatus | Tree-based ortholog | 1-to-1 | CL06G00890 | 1 | |
| Anchor point | many-to-1 | CL06G00890 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CL06G00890 | 1 | ||
| Citrus sinensis | Tree-based ortholog | 1-to-1 | CS00348G00130 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CS00062G00830 | 1 | ||
| Cucumis melo | Tree-based ortholog | 1-to-1 | CM00052G02360 | 1 | |
| Anchor point | many-to-1 | CM00052G02360 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CM00052G02360 | 1 | ||
| Eucalyptus grandis | Tree-based ortholog | 1-to-1 | EG0001G00770 | 1 | |
| Anchor point | many-to-1 | EG0001G00770 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | EG0001G00770 | 1 | ||
| Fragaria vesca | Tree-based ortholog | 1-to-many | FV1G19760 FV2G07230 FV0G44190 | 3 | |
| Anchor point | many-to-1 | FV0G44190 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | FV0G44190 | 1 | ||
| Glycine max | Orthologous gene family | many-to-many | GM11G13580 GM12G05580 GM13G41960 ... | 4 | |
| Tree-based ortholog | 1-to-many | GM11G13580 GM12G05580 GM15G03430 ... | 4 | ||
| Anchor point | many-to-many | GM15G03430 GM13G41960 GM11G13580 ... | 4 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | GM15G03430 GM13G41960 | 2 | ||
| Gossypium raimondii | Orthologous gene family | many-to-many | GR06G22910 GR11G14160 | 2 | |
| Tree-based ortholog | 1-to-many | GR06G22910 GR11G14160 | 2 | ||
| Anchor point | many-to-1 | GR06G22910 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | GR11G14160 GR06G22910 | 2 | ||
| Lotus japonicus | Orthologous gene family | many-to-1 | LJ3G002770 | 1 | |
| Tree-based ortholog | 1-to-1 | LJ3G002770 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | LJ3G002770 | 1 | ||
| Malus domestica | Orthologous gene family | many-to-1 | MD00G432790 | 1 | |
| Tree-based ortholog | 1-to-1 | MD00G432790 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | MD00G432790 | 1 | ||
| Manihot esculenta | Tree-based ortholog | 1-to-many | ME08314G00020 ME05363G00100 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | ME08314G00020 ME05363G00100 | 2 | ||
| Medicago truncatula | Orthologous gene family | many-to-many | MT2G098950 MT4G067310 | 2 | |
| Tree-based ortholog | 1-to-many | MT4G067310 MT2G098950 | 2 | ||
| Anchor point | many-to-many | MT2G098950 MT4G067310 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | MT4G067310 | 1 | ||
| Oryza sativa ssp. japonica | Orthologous gene family | many-to-1 | OS01G66940 | 1 | |
| Tree-based ortholog | 1-to-1 | OS01G66940 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OS01G66940 | 1 | ||
| Ostreococcus lucimarinus | Best-Hits-and-Inparalogs(BHI)family | 1-to-many | OL21G01220 OL13G01760 | 2 | |
| Physcomitrella patens | Tree-based ortholog | 1-to-many | PP00249G00570 PP00036G01420 PP00276G00490 ... | 8 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PP00022G00590 PP00012G01270 PP00027G00930 | 3 | ||
| Populus trichocarpa | Orthologous gene family | many-to-many | PT07G12970 PT17G02900 | 2 | |
| Tree-based ortholog | 1-to-many | PT17G02900 PT07G12970 | 2 | ||
| Anchor point | many-to-many | PT07G12970 PT17G02900 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PT07G12970 PT17G02900 | 2 | ||
| Prunus persica | Orthologous gene family | many-to-1 | PPE_001G19620 | 1 | |
| Tree-based ortholog | 1-to-1 | PPE_001G19620 | 1 | ||
| Anchor point | many-to-1 | PPE_001G19620 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PPE_001G19620 | 1 | ||
| Ricinus communis | Orthologous gene family | many-to-1 | RC29569G00070 | 1 | |
| Tree-based ortholog | 1-to-1 | RC29569G00070 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | RC29569G00070 | 1 | ||
| Solanum lycopersicum | Orthologous gene family | many-to-1 | SL06G073190 | 1 | |
| Tree-based ortholog | 1-to-1 | SL06G073190 | 1 | ||
| Anchor point | many-to-1 | SL06G073190 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | SL06G073190 | 1 | ||
| Solanum tuberosum | Orthologous gene family | many-to-1 | ST06G027780 | 1 | |
| Tree-based ortholog | 1-to-1 | ST06G027780 | 1 | ||
| Anchor point | many-to-1 | ST06G027780 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ST06G027780 | 1 | ||
| Thellungiella parvula | Orthologous gene family | many-to-many | TP1G04840 TP4G13870 TP5G03680 | 3 | |
| Tree-based ortholog | 1-to-1 | TP4G13870 | 1 | ||
| Anchor point | many-to-many | TP4G13870 TP1G04840 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TP4G13870 | 1 | ||
| Theobroma cacao | Orthologous gene family | many-to-1 | TC0004G18210 | 1 | |
| Tree-based ortholog | 1-to-1 | TC0004G18210 | 1 | ||
| Anchor point | many-to-1 | TC0004G18210 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TC0004G18210 | 1 | ||
| Vitis vinifera | Tree-based ortholog | 1-to-1 | VV05G00880 | 1 | |
| Anchor point | many-to-1 | VV05G00880 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | VV15G08560 | 1 | ||
| Zea mays | Orthologous gene family | many-to-many | ZM03G24380 ZM08G30120 | 2 | |
| Tree-based ortholog | 1-to-many | ZM08G30120 ZM03G24380 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | ZM08G30120 ZM03G24380 | 2 |