Expansion plot
Gene family finder
Ks-graphs
Skyline plot
Synteny plot
WGDotplot
Functional clusters
WGMapping
BLAST
Workbench
Integrative Orthology Viewer:
AL4G10520
(Arabidopsis lyrata)
Inparalogs
| Organism | Source | Genes | #genes | Details |
|---|---|---|---|---|
| Arabidopsis lyrata | Orthologous gene family | AL4G10520 AL4G10710 | 2 |  |
| Best-Hits-and-Inparalogs(BHI)family | AL4G10710 AL4G10520 | 2 | ||
| Tree-based ortholog | AL1G32020 AL1G31570 AL8G17930 ... | 100 |
Orthologs
| Organism | Source | Type | Genes | #genes | Details |
|---|---|---|---|---|---|
| Amborella trichopoda | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | ATR_00057G01290 | 1 | |
| Arabidopsis thaliana | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | AT2G31470 | 1 | |
| Tree-based ortholog | many-to-many | AT1G30790 AT1G30780 AT1G32660 ... | 51 | ||
| Beta vulgaris | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | BV0G73450 | 1 | |
| Brassica rapa | Best-Hits-and-Inparalogs(BHI)family | many-to-many | BR04G19220 BR04G17270 BR04G19230 ... | 11 | |
| Tree-based ortholog | many-to-many | BR01G01750 BR01G14270 BR02G04480 ... | 69 | ||
| Capsella rubella | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CRU_003G23210 | 1 | |
| Tree-based ortholog | many-to-many | CRU_004G04580 CRU_008G06140 CRU_004G04590 ... | 38 | ||
| Carica papaya | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CP00117G00110 | 1 | |
| Tree-based ortholog | many-to-1 | CP00001G02440 | 1 | ||
| Chlamydomonas reinhardtii | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CR12G05390 | 1 | |
| Citrullus lanatus | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CL03G16140 | 1 | |
| Citrus sinensis | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CS00571G00100 | 1 | |
| Tree-based ortholog | many-to-many | CS00019G01070 CS06965G00010 | 2 | ||
| Cucumis melo | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CM00025G01590 | 1 | |
| Eucalyptus grandis | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | EG0002G14210 | 1 | |
| Tree-based ortholog | many-to-many | EG0007G01350 EG0007G01320 EG0002G25210 ... | 6 | ||
| Fragaria vesca | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | FV0G24060 | 1 | |
| Glycine max | Best-Hits-and-Inparalogs(BHI)family | many-to-many | GM19G42890 GM03G40280 | 2 | |
| Tree-based ortholog | many-to-1 | GM02G14220 | 1 | ||
| Gossypium raimondii | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | GR13G11680 | 1 | |
| Lotus japonicus | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | LJ1G072900 | 1 | |
| Malus domestica | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | MD12G023120 | 1 | |
| Manihot esculenta | Best-Hits-and-Inparalogs(BHI)family | many-to-many | ME04285G00220 ME03614G04070 | 2 | |
| Tree-based ortholog | many-to-many | ME07013G00010 ME08420G00020 | 2 | ||
| Medicago truncatula | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | MT7G114240 | 1 | |
| Oryza sativa ssp. japonica | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | OS07G46990 | 1 | |
| Ostreococcus lucimarinus | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | OL19G00560 | 1 | |
| Physcomitrella patens | Best-Hits-and-Inparalogs(BHI)family | many-to-many | PP00018G00490 PP00044G01480 | 2 | |
| Populus trichocarpa | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | PT05G04440 | 1 | |
| Tree-based ortholog | many-to-1 | PT08G14400 | 1 | ||
| Prunus persica | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | PPE_006G33910 | 1 | |
| Ricinus communis | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | RC30128G00760 | 1 | |
| Solanum lycopersicum | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | SL01G067740 | 1 | |
| Solanum tuberosum | Best-Hits-and-Inparalogs(BHI)family | many-to-many | ST04G022820 ST03G008650 ST09G029220 ... | 4 | |
| Tree-based ortholog | many-to-1 | ST07G009450 | 1 | ||
| Thellungiella parvula | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | TP4G14420 | 1 | |
| Tree-based ortholog | many-to-many | TP4G14420 TP5G12630 TP3G17210 ... | 6 | ||
| Theobroma cacao | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | TC0005G25200 | 1 | |
| Tree-based ortholog | many-to-1 | TC0003G00710 | 1 | ||
| Vitis vinifera | Best-Hits-and-Inparalogs(BHI)family | many-to-many | VV14G04290 VV14G04200 | 2 | |
| Zea mays | Best-Hits-and-Inparalogs(BHI)family | many-to-many | ZM01G15520 ZM09G21130 | 2 | |